RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 SNRPGP62308 76 aaKnown RBP1.75□□□□□ -2.13
HMGB3P30-201ENST00000457863 H0YGX0 51 aa1.74□□□□□ -2.13
HMGB3P30-201ENST00000457863 SPINK4O60575 86 aa1.74□□□□□ -2.13
HMGB3P30-201ENST00000457863 CACNA1EQ15878 2313 aa1.74□□□□□ -2.13
HMGB3P30-201ENST00000457863 GOLGA4Q13439 2230 aaKnown RBP1.74□□□□□ -2.13
HMGB3P30-201ENST00000457863 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.73□□□□□ -2.13
HMGB3P30-201ENST00000457863 TRIOBPQ9H2D6 2365 aa1.73□□□□□ -2.13
HMGB3P30-201ENST00000457863 FLG2Q5D862 2391 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P30-201ENST00000457863 FAM208BQ5VWN6 2430 aa1.71□□□□□ -2.14
HMGB3P30-201ENST00000457863 I3L2K1 104 aa1.71□□□□□ -2.14
HMGB3P30-201ENST00000457863 CRIP1P50238 77 aa1.71□□□□□ -2.14
HMGB3P30-201ENST00000457863 K7EIL1 84 aa1.7□□□□□ -2.14
HMGB3P30-201ENST00000457863 NDUFA3O95167 84 aa1.7□□□□□ -2.14
HMGB3P30-201ENST00000457863 JMJD1CQ15652 2540 aa1.7□□□□□ -2.14
HMGB3P30-201ENST00000457863 CNTRLQ7Z7A1 2325 aa1.69□□□□□ -2.14
HMGB3P30-201ENST00000457863 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
HMGB3P30-201ENST00000457863 BPTFQ12830 3046 aa1.69□□□□□ -2.14
HMGB3P30-201ENST00000457863 DEFB123Q8N688 67 aa1.69□□□□□ -2.14
HMGB3P30-201ENST00000457863 CRIPTQ9P021 101 aa1.69□□□□□ -2.14
HMGB3P30-201ENST00000457863 LYNX1P0DP58 116 aa1.68□□□□□ -2.14
HMGB3P30-201ENST00000457863 Q8IZM0 81 aa1.68□□□□□ -2.14
HMGB3P30-201ENST00000457863 TP53AIP1Q9HCN2 124 aa1.68□□□□□ -2.14
HMGB3P30-201ENST00000457863 CDKN2A-AS1Q9UH64 79 aa1.68□□□□□ -2.14
HMGB3P30-201ENST00000457863 K7EQZ3 153 aa1.67□□□□□ -2.14
HMGB3P30-201ENST00000457863 LINC00158P58513 81 aa1.67□□□□□ -2.14
HMGB3P30-201ENST00000457863 USMG5Q96IX5 58 aa1.66□□□□□ -2.14
HMGB3P30-201ENST00000457863 MRPL34Q9BQ48 92 aaKnown RBP1.66□□□□□ -2.14
HMGB3P30-201ENST00000457863 TMEM167BQ9NRX6 74 aa1.66□□□□□ -2.14
HMGB3P30-201ENST00000457863 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
HMGB3P30-201ENST00000457863 COX6B2Q6YFQ2 88 aa1.65□□□□□ -2.15
HMGB3P30-201ENST00000457863 PRO3102Q9H379 93 aa1.65□□□□□ -2.15
HMGB3P30-201ENST00000457863 DOPEY2Q9Y3R5 2298 aa1.64□□□□□ -2.15
HMGB3P30-201ENST00000457863 PIGYQ3MUY2 71 aa1.64□□□□□ -2.15
HMGB3P30-201ENST00000457863 OTOGLQ3ZCN5 2332 aa1.64□□□□□ -2.15
HMGB3P30-201ENST00000457863 SORL1Q92673 2214 aa1.63□□□□□ -2.15
HMGB3P30-201ENST00000457863 LOC730098B7Z3J9 87 aa1.63□□□□□ -2.15
HMGB3P30-201ENST00000457863 LYNX1G3V0Z9 82 aa1.63□□□□□ -2.15
HMGB3P30-201ENST00000457863 KRTAP10-10P60014 251 aa1.63□□□□□ -2.15
HMGB3P30-201ENST00000457863 COL6A6A6NMZ7 2263 aa1.63□□□□□ -2.15
HMGB3P30-201ENST00000457863 CCL22O00626 93 aa1.62□□□□□ -2.15
HMGB3P30-201ENST00000457863 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
HMGB3P30-201ENST00000457863 LINC00308Q8TCZ7 52 aa1.62□□□□□ -2.15
HMGB3P30-201ENST00000457863 CNFNQ9BYD5 112 aa1.62□□□□□ -2.15
HMGB3P30-201ENST00000457863 COX6A2Q02221 97 aa1.61□□□□□ -2.15
HMGB3P30-201ENST00000457863 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
HMGB3P30-201ENST00000457863 H0YAA0 97 aa1.6□□□□□ -2.15
HMGB3P30-201ENST00000457863 PIEZO2Q9H5I5 2752 aa1.59□□□□□ -2.15
HMGB3P30-201ENST00000457863 IAPPP10997 89 aa1.59□□□□□ -2.15
HMGB3P30-201ENST00000457863 DEFB119Q8N690 84 aa1.59□□□□□ -2.15
HMGB3P30-201ENST00000457863 PTPRZ1P23471 2315 aaPredicted RBP1.58□□□□□ -2.16
HMGB3P30-201ENST00000457863 PLCE1Q9P212 2302 aa1.58□□□□□ -2.16
HMGB3P30-201ENST00000457863 TFF3Q07654 80 aa1.58□□□□□ -2.16
HMGB3P30-201ENST00000457863 SMIM2Q9BVW6 85 aa1.58□□□□□ -2.16
HMGB3P30-201ENST00000457863 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
HMGB3P30-201ENST00000457863 NDUFA1O15239 70 aa1.56□□□□□ -2.16
HMGB3P30-201ENST00000457863 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
HMGB3P30-201ENST00000457863 MINOS1Q5TGZ0 78 aa1.56□□□□□ -2.16
HMGB3P30-201ENST00000457863 KRTAP13-1Q8IUC0 172 aa1.56□□□□□ -2.16
HMGB3P30-201ENST00000457863 TTTY10Q9BZA0 68 aa1.56□□□□□ -2.16
HMGB3P30-201ENST00000457863 PRO0255Q9UI72 69 aa1.56□□□□□ -2.16
HMGB3P30-201ENST00000457863 PRB3Q04118 309 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P30-201ENST00000457863 LELP1Q5T871 98 aa1.55□□□□□ -2.16
HMGB3P30-201ENST00000457863 C6orf48Q9UBA6 75 aa1.55□□□□□ -2.16
HMGB3P30-201ENST00000457863 ALMS1Q8TCU4 4167 aa1.55□□□□□ -2.16
HMGB3P30-201ENST00000457863 PTPRQQ9UMZ3 2332 aa1.54□□□□□ -2.16
HMGB3P30-201ENST00000457863 RPS27LQ71UM5 84 aaKnown RBP1.53□□□□□ -2.16
HMGB3P30-201ENST00000457863 ARHGAP5-AS1Q96IT6 56 aa1.53□□□□□ -2.16
HMGB3P30-201ENST00000457863 PDE4DIPQ5VU43 2346 aa1.52□□□□□ -2.17
HMGB3P30-201ENST00000457863 SPINK9Q5DT21 86 aa1.52□□□□□ -2.17
HMGB3P30-201ENST00000457863 Q5VSD8 79 aa1.52□□□□□ -2.17
HMGB3P30-201ENST00000457863 USF3Q68DE3 2245 aa1.51□□□□□ -2.17
HMGB3P30-201ENST00000457863 FBN1P35555 2871 aaKnown RBP1.51□□□□□ -2.17
HMGB3P30-201ENST00000457863 SPRR1AP35321 89 aa1.51□□□□□ -2.17
HMGB3P30-201ENST00000457863 Q6ZSA8 131 aa1.51□□□□□ -2.17
HMGB3P30-201ENST00000457863 C2CD3Q4AC94 2353 aa1.51□□□□□ -2.17
HMGB3P30-201ENST00000457863 H1FX-AS1Q4G0G2 97 aa1.5□□□□□ -2.17
HMGB3P30-201ENST00000457863 ROS1P08922 2347 aa1.5□□□□□ -2.17
HMGB3P30-201ENST00000457863 H3BSH0 61 aa1.49□□□□□ -2.17
HMGB3P30-201ENST00000457863 RPS27P42677 84 aaKnown RBP1.49□□□□□ -2.17
HMGB3P30-201ENST00000457863 DEFB106AQ8N104 65 aa1.49□□□□□ -2.17
HMGB3P30-201ENST00000457863 ZNF462Q96JM2 2506 aa1.48□□□□□ -2.17
HMGB3P30-201ENST00000457863 IGF2RP11717 2491 aa1.48□□□□□ -2.17
HMGB3P30-201ENST00000457863 J3QKU1 62 aa1.47□□□□□ -2.17
HMGB3P30-201ENST00000457863 WFDC13Q8IUB5 93 aa1.47□□□□□ -2.17
HMGB3P30-201ENST00000457863 DEFB105AQ8NG35 78 aa1.47□□□□□ -2.17
HMGB3P30-201ENST00000457863 APLNQ9ULZ1 77 aa1.47□□□□□ -2.17
HMGB3P30-201ENST00000457863 KNL1Q8NG31 2342 aa1.47□□□□□ -2.17
HMGB3P30-201ENST00000457863 PKDREJQ9NTG1 2253 aa1.47□□□□□ -2.17
HMGB3P30-201ENST00000457863 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P30-201ENST00000457863 DEFB130BP0DP73 79 aa1.46□□□□□ -2.18
HMGB3P30-201ENST00000457863 DEFB130AP0DP74 79 aa1.46□□□□□ -2.18
HMGB3P30-201ENST00000457863 WNK2Q9Y3S1 2297 aa1.46□□□□□ -2.18
HMGB3P30-201ENST00000457863 HIVEP2P31629 2446 aa1.46□□□□□ -2.18
HMGB3P30-201ENST00000457863 A0A0D9SG42 100 aa1.45□□□□□ -2.18
HMGB3P30-201ENST00000457863 TPRP12270 2363 aaKnown RBP1.45□□□□□ -2.18
HMGB3P30-201ENST00000457863 SPRR1BP22528 89 aa1.44□□□□□ -2.18
HMGB3P30-201ENST00000457863 SPTBN2O15020 2390 aa1.43□□□□□ -2.18
HMGB3P30-201ENST00000457863 CACNA1HO95180 2353 aa1.43□□□□□ -2.18
HMGB3P30-201ENST00000457863 WFDC10BQ8IUB3 73 aa1.43□□□□□ -2.18
HMGB3P30-201ENST00000457863 LINC01590Q5TEZ4 76 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms