RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 LINC00476Q8WZB0 136 aa4.41□□□□□ -1.7
ECHDC1-210ENST00000454859 hADV29S1A0JD25 119 aa4.4□□□□□ -1.7
ECHDC1-210ENST00000454859 JMJD7-PLA2G4BH0Y9G9 81 aa4.4□□□□□ -1.7
ECHDC1-210ENST00000454859 SPRR1AP35321 89 aa4.4□□□□□ -1.7
ECHDC1-210ENST00000454859 ETDBQ3ZM63 59 aa4.4□□□□□ -1.7
ECHDC1-210ENST00000454859 DHRS4-AS1Q9P1J3 65 aa4.4□□□□□ -1.7
ECHDC1-210ENST00000454859 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-210ENST00000454859 DNAH7Q8WXX0 4024 aa4.4□□□□□ -1.71
ECHDC1-210ENST00000454859 IGLV1-50A0A075B6I6 118 aa4.4□□□□□ -1.71
ECHDC1-210ENST00000454859 A0A087WTM6 91 aa4.4□□□□□ -1.71
ECHDC1-210ENST00000454859 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-210ENST00000454859 Q8NDZ9 215 aa4.4□□□□□ -1.71
ECHDC1-210ENST00000454859 PDE6GP18545 87 aa4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 PRR3P79522 188 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 OBSCN-AS1Q96MR7 158 aa4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 H0Y9J4 135 aa4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 FAM218AQ96MZ4 157 aa4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
ECHDC1-210ENST00000454859 LECT2O14960 151 aa4.38□□□□□ -1.71
ECHDC1-210ENST00000454859 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
ECHDC1-210ENST00000454859 SDIM1Q6ZPB5 146 aa4.38□□□□□ -1.71
ECHDC1-210ENST00000454859 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
ECHDC1-210ENST00000454859 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
ECHDC1-210ENST00000454859 A0A087WYN8 130 aa4.38□□□□□ -1.71
ECHDC1-210ENST00000454859 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
ECHDC1-210ENST00000454859 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
ECHDC1-210ENST00000454859 KRTAP4-16G5E9R7 235 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-210ENST00000454859 SERTAD4-AS1Q5TG53 156 aa4.37□□□□□ -1.71
ECHDC1-210ENST00000454859 A0A096LNI7 61 aa4.36□□□□□ -1.71
ECHDC1-210ENST00000454859 A0A1B0GW54 56 aa4.36□□□□□ -1.71
ECHDC1-210ENST00000454859 Q6ZRX8 168 aa4.36□□□□□ -1.71
ECHDC1-210ENST00000454859 ETDCA0A1B0GVM5 59 aa4.35□□□□□ -1.71
ECHDC1-210ENST00000454859 LY6G6CO95867 125 aa4.35□□□□□ -1.71
ECHDC1-210ENST00000454859 REG3GQ6UW15 175 aa4.35□□□□□ -1.71
ECHDC1-210ENST00000454859 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
ECHDC1-210ENST00000454859 RPL37AP8A6NKH3 93 aa4.35□□□□□ -1.71
ECHDC1-210ENST00000454859 B5MCH6 92 aa4.35□□□□□ -1.71
ECHDC1-210ENST00000454859 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.71
ECHDC1-210ENST00000454859 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.72
ECHDC1-210ENST00000454859 RTL8CO15255 209 aa4.34□□□□□ -1.72
ECHDC1-210ENST00000454859 TEX49A0A1B0GTD5 131 aa4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 LINC00336Q6ZUF6 198 aa4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 KRTAP7-1Q8IUC3 87 aa4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 MTURNQ8N3F0 131 aa4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 IGLV5-48A0A075B6I7 105 aa4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 M0R2N4 97 aa4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 FAM19A5Q7Z5A7 132 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 PLAC8Q9NZF1 115 aa4.33□□□□□ -1.72
ECHDC1-210ENST00000454859 Q6ZQY7 126 aa4.32□□□□□ -1.72
ECHDC1-210ENST00000454859 VPS25Q9BRG1 176 aa4.32□□□□□ -1.72
ECHDC1-210ENST00000454859 ALMS1Q8TCU4 4167 aa4.32□□□□□ -1.72
ECHDC1-210ENST00000454859 IGLV5-52A0A0A0MRZ9 124 aa4.32□□□□□ -1.72
ECHDC1-210ENST00000454859 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-210ENST00000454859 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
ECHDC1-210ENST00000454859 A0A1W2PNN7 141 aa4.31□□□□□ -1.72
ECHDC1-210ENST00000454859 FAM168BA1KXE4 195 aa4.31□□□□□ -1.72
ECHDC1-210ENST00000454859 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 CCKP06307 115 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 SCGB1A1P11684 91 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 LCE6AA0A183 80 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 BCE1O60756 84 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 SIGMAR1Q99720 223 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 TENM2Q9NT68 2774 aa4.3□□□□□ -1.72
ECHDC1-210ENST00000454859 SPRR1BP22528 89 aa4.29□□□□□ -1.72
ECHDC1-210ENST00000454859 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-210ENST00000454859 UBE2BP63146 152 aa4.29□□□□□ -1.72
ECHDC1-210ENST00000454859 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
ECHDC1-210ENST00000454859 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-210ENST00000454859 PCP4P48539 62 aa4.29□□□□□ -1.72
ECHDC1-210ENST00000454859 LAMTOR3Q9UHA4 124 aa4.29□□□□□ -1.72
ECHDC1-210ENST00000454859 TRBV7-4A0A0J9YYF1 115 aa4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 RPL37AP61513 92 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 Q6Q795 121 aa4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 LINC00643Q86TS7 51 aa4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 ZNF706Q9Y5V0 76 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 FAM229AH3BQW9 127 aa4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 Q9BRP9 147 aa4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 CDIP1Q9H305 208 aa4.28□□□□□ -1.72
ECHDC1-210ENST00000454859 STARD9Q9P2P6 4700 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 Q6ZQT0 140 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 Q6ZSA8 131 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 DPH3Q96FX2 82 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 Q6JHZ5 121 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 FAM19A1Q7Z5A9 133 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 KRTAP13-1Q8IUC0 172 aa4.27□□□□□ -1.73
ECHDC1-210ENST00000454859 KMT2CQ8NEZ4 4911 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 CHTF8P0CG12 524 aa4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 LINC01547P58512 204 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 PHF5AQ7RTV0 110 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 Q8N377 158 aa4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 SMCR5Q8TEV8 140 aa4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 C14orf132Q9NPU4 83 aa4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 UBE2AP49459 152 aa4.26□□□□□ -1.73
ECHDC1-210ENST00000454859 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms