RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SCN11AQ9UI33 1791 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 ARFGEF2Q9Y6D5 1785 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 HSPG2P98160 4391 aa0.07□□□□□ -2.4
HMGN3P1-201ENST00000453847 S100A13Q99584 98 aa0.07□□□□□ -2.4
HMGN3P1-201ENST00000453847 TNRC6CQ9HCJ0 1690 aaKnown RBP0.07□□□□□ -2.4
HMGN3P1-201ENST00000453847 CFAP74Q9C0B2 1584 aa0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 CCL22O00626 93 aa0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 RGPD8O14715 1765 aaPredicted RBP0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 RGPD5Q99666 1765 aa0.06□□□□□ -2.4
HMGN3P1-201ENST00000453847 ADIRFQ15847 76 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 WFDC9Q8NEX5 89 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 NWD1Q149M9 1564 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 NESP48681 1621 aa0.05□□□□□ -2.4
HMGN3P1-201ENST00000453847 C4AP0C0L4 1744 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 C4BP0C0L5 1744 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 H3BUT2 72 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 BVES-AS1Q5T3Y7 98 aa0.04□□□□□ -2.4
HMGN3P1-201ENST00000453847 EP300Q09472 2414 aaPredicted RBP0.03□□□□□ -2.4
HMGN3P1-201ENST00000453847 DEFB121Q5J5C9 76 aa0.03□□□□□ -2.4
HMGN3P1-201ENST00000453847 HEPN1Q6WQI6 88 aa0.03□□□□□ -2.4
HMGN3P1-201ENST00000453847 CFAP43Q8NDM7 1665 aa0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 HECTD4Q9Y4D8 3996 aa0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 ABCA8O94911 1581 aa0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 LRRIQ1Q96JM4 1722 aa0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 CNOT1A5YKK6 2376 aaKnown RBP0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 LOC730098B7Z3J9 87 aa0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 WFDC13Q8IUB5 93 aa0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 RRBP1Q9P2E9 1410 aaKnown RBP0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 CHD8Q9HCK8 2581 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 FLNCQ14315 2725 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 IFI6P09912 130 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 ABCC1P33527 1531 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 CDKN2A-AS1Q9UH64 79 aa0□□□□□ -2.41
HMGN3P1-201ENST00000453847 PLCH1Q4KWH8 1693 aa-0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 NDUFB1O75438 58 aa-0.01□□□□□ -2.41
HMGN3P1-201ENST00000453847 M0R2T5 61 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 NDUFA3O95167 84 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 PTPN23Q9H3S7 1636 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 ADAMTS12P58397 1594 aa-0.02□□□□□ -2.41
HMGN3P1-201ENST00000453847 KNL1Q8NG31 2342 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 RICTORQ6R327 1708 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 LCE6AA0A183 80 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 RPL38P63173 70 aaKnown RBP-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 ATP5EP2Q5VTU8 51 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 MAP1BP46821 2468 aaKnown RBP-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 WNK1Q9H4A3 2382 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 MAP3K1Q13233 1512 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 CD163L1Q9NR16 1453 aa-0.03□□□□□ -2.41
HMGN3P1-201ENST00000453847 LRP2P98164 4655 aa-0.04□□□□□ -2.42
HMGN3P1-201ENST00000453847 DCHS2Q6V1P9 2916 aa-0.05□□□□□ -2.42
HMGN3P1-201ENST00000453847 UMAD1C9J7I0 102 aa-0.05□□□□□ -2.42
HMGN3P1-201ENST00000453847 COX6B2Q6YFQ2 88 aa-0.05□□□□□ -2.42
HMGN3P1-201ENST00000453847 SMIM13P0DJ93 91 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 HMGA1P17096 107 aaKnown RBP-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 C18orf32Q8TCD1 76 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 CCDC88BA6NC98 1476 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 SETXQ7Z333 2677 aaKnown RBP-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 GPR98Q8WXG9 6306 aa-0.06□□□□□ -2.42
HMGN3P1-201ENST00000453847 NREPQ16612 68 aa-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 IQGAP3Q86VI3 1631 aa-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 CICQ96RK0 1608 aaPredicted RBP-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.07□□□□□ -2.42
HMGN3P1-201ENST00000453847 SPRR2BP35325 72 aa-0.08□□□□□ -2.42
HMGN3P1-201ENST00000453847 MYO5CQ9NQX4 1742 aa-0.08□□□□□ -2.42
HMGN3P1-201ENST00000453847 LRP1BQ9NZR2 4599 aa-0.08□□□□□ -2.42
HMGN3P1-201ENST00000453847 DDX60LQ5H9U9 1706 aaKnown RBP-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 PARP4Q9UKK3 1724 aaKnown RBP-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 WIZO95785 1651 aa-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 APC2O95996 2303 aa-0.09□□□□□ -2.42
HMGN3P1-201ENST00000453847 ANKARQ7Z5J8 1434 aa-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 IFI27P40305 119 aaPredicted RBP-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 DEFB135Q30KP9 77 aa-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 SYNE2Q8WXH0 6885 aaKnown RBP-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 COL6A3P12111 3177 aa-0.1□□□□□ -2.43
HMGN3P1-201ENST00000453847 PLXNC1O60486 1568 aa-0.11□□□□□ -2.43
HMGN3P1-201ENST00000453847 FSIP2Q5CZC0 6907 aa-0.11□□□□□ -2.43
HMGN3P1-201ENST00000453847 A0A087WXM4 84 aa-0.11□□□□□ -2.43
HMGN3P1-201ENST00000453847 TRANK1O15050 2925 aa-0.12□□□□□ -2.43
HMGN3P1-201ENST00000453847 NDUFA4O00483 81 aa-0.12□□□□□ -2.43
HMGN3P1-201ENST00000453847 ACANP16112 2415 aa-0.12□□□□□ -2.43
HMGN3P1-201ENST00000453847 TJP1Q07157 1748 aa-0.13□□□□□ -2.43
HMGN3P1-201ENST00000453847 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
HMGN3P1-201ENST00000453847 H0YAA0 97 aa-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 FLNBO75369 2602 aaKnown RBP-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 FLNAP21333 2647 aaKnown RBP-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 TENM2Q9NT68 2774 aa-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 PKHD1P08F94 4074 aa-0.15□□□□□ -2.43
HMGN3P1-201ENST00000453847 RNF17Q9BXT8 1623 aaKnown RBP-0.16□□□□□ -2.43
HMGN3P1-201ENST00000453847 AKAP13Q12802 2813 aa-0.16□□□□□ -2.43
HMGN3P1-201ENST00000453847 PCNX1Q96RV3 2341 aa-0.16□□□□□ -2.44
HMGN3P1-201ENST00000453847 NRAPQ86VF7 1730 aa-0.17□□□□□ -2.44
HMGN3P1-201ENST00000453847 PRO3102Q9H379 93 aa-0.17□□□□□ -2.44
HMGN3P1-201ENST00000453847 ANKRD50Q9ULJ7 1429 aa-0.17□□□□□ -2.44
HMGN3P1-201ENST00000453847 LMTK2Q8IWU2 1503 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 ITSN1Q15811 1721 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 LINC00158P58513 81 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 UGGT2Q9NYU1 1516 aa-0.18□□□□□ -2.44
HMGN3P1-201ENST00000453847 PKD1P98161 4303 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms