RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 MEGF8Q7Z7M0 2845 aa4.03□□□□□ -1.76
PROM1-201ENST00000447510 IGLV5-45A0A087WSX0 123 aa4.03□□□□□ -1.76
PROM1-201ENST00000447510 CASC10Q5T4H9 136 aa4.03□□□□□ -1.76
PROM1-201ENST00000447510 TMEM254Q8TBM7 123 aa4.03□□□□□ -1.76
PROM1-201ENST00000447510 LINC00269Q8N2A0 174 aa4.03□□□□□ -1.77
PROM1-201ENST00000447510 CDC42SE2Q9NRR3 84 aa4.03□□□□□ -1.77
PROM1-201ENST00000447510 APLNQ9ULZ1 77 aa4.03□□□□□ -1.77
PROM1-201ENST00000447510 LINC00588Q9Y4M8 146 aa4.03□□□□□ -1.77
PROM1-201ENST00000447510 KLKP1Q107X0 134 aa4.02□□□□□ -1.77
PROM1-201ENST00000447510 NTM-AS1Q6ZSK4 140 aa4.02□□□□□ -1.77
PROM1-201ENST00000447510 BPY2O14599 106 aa4.01□□□□□ -1.77
PROM1-201ENST00000447510 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
PROM1-201ENST00000447510 NDUFC1O43677 76 aa4.01□□□□□ -1.77
PROM1-201ENST00000447510 REG3AQ06141 175 aa4.01□□□□□ -1.77
PROM1-201ENST00000447510 Q6ZQY7 126 aa4.01□□□□□ -1.77
PROM1-201ENST00000447510 IBA57-AS1B1ANH7 110 aa4□□□□□ -1.77
PROM1-201ENST00000447510 C9orf116Q5BN46 136 aaPredicted RBP4□□□□□ -1.77
PROM1-201ENST00000447510 HIGD2AQ9BW72 106 aa4□□□□□ -1.77
PROM1-201ENST00000447510 OBSCN-AS1Q96MR7 158 aa4□□□□□ -1.77
PROM1-201ENST00000447510 IGLV4-60A0A075B6I1 120 aa4□□□□□ -1.77
PROM1-201ENST00000447510 PRYO14603 147 aa4□□□□□ -1.77
PROM1-201ENST00000447510 MRPL55Q7Z7F7 128 aaKnown RBP4□□□□□ -1.77
PROM1-201ENST00000447510 TRBV10-3A0A0K0K1G6 114 aa3.99□□□□□ -1.77
PROM1-201ENST00000447510 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
PROM1-201ENST00000447510 FAM30AQ9NZY2 134 aa3.99□□□□□ -1.77
PROM1-201ENST00000447510 ATP5EP56381 51 aaPredicted RBP3.99□□□□□ -1.77
PROM1-201ENST00000447510 LINC01556Q5JQF7 62 aa3.98□□□□□ -1.77
PROM1-201ENST00000447510 NBDYA0A0U1RRE5 68 aa3.98□□□□□ -1.77
PROM1-201ENST00000447510 Q6ZQT0 140 aa3.98□□□□□ -1.77
PROM1-201ENST00000447510 ZNF561-AS1K7EIQ3 104 aa3.98□□□□□ -1.77
PROM1-201ENST00000447510 C1orf134Q5TEV5 83 aa3.98□□□□□ -1.77
PROM1-201ENST00000447510 CHCHD10Q8WYQ3 142 aaPredicted RBP3.98□□□□□ -1.77
PROM1-201ENST00000447510 LINC00476Q8WZB0 136 aa3.98□□□□□ -1.77
PROM1-201ENST00000447510 FAM19A3Q7Z5A8 133 aa3.97□□□□□ -1.77
PROM1-201ENST00000447510 A0A1B0GUV1 79 aa3.97□□□□□ -1.77
PROM1-201ENST00000447510 DNAH10OSP0CZ25 163 aa3.96□□□□□ -1.77
PROM1-201ENST00000447510 DEFB105AQ8NG35 78 aa3.96□□□□□ -1.77
PROM1-201ENST00000447510 LINC00959A0A1B0GUT2 108 aa3.96□□□□□ -1.78
PROM1-201ENST00000447510 CMYA5Q8N3K9 4069 aa3.96□□□□□ -1.78
PROM1-201ENST00000447510 EPM2AB3EWF7 344 aa3.95□□□□□ -1.78
PROM1-201ENST00000447510 IGHV3OR16-9A0A0B4J2B5 98 aa3.95□□□□□ -1.78
PROM1-201ENST00000447510 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
PROM1-201ENST00000447510 C6orf223Q8N319 242 aa3.95□□□□□ -1.78
PROM1-201ENST00000447510 XAGE1AQ9HD64 81 aa3.95□□□□□ -1.78
PROM1-201ENST00000447510 HIGD2BQ4VC39 106 aa3.95□□□□□ -1.78
PROM1-201ENST00000447510 LINC00575Q6W349 94 aa3.95□□□□□ -1.78
PROM1-201ENST00000447510 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.94□□□□□ -1.78
PROM1-201ENST00000447510 CD164L2Q6UWJ8 174 aa3.94□□□□□ -1.78
PROM1-201ENST00000447510 A8MUN3 132 aa3.94□□□□□ -1.78
PROM1-201ENST00000447510 CXCL6P80162 114 aa3.94□□□□□ -1.78
PROM1-201ENST00000447510 CHKB-CPT1BH3BT56 60 aa3.94□□□□□ -1.78
PROM1-201ENST00000447510 C14orf177Q52M58 125 aa3.94□□□□□ -1.78
PROM1-201ENST00000447510 SPAG11BQ08648 103 aa3.93□□□□□ -1.78
PROM1-201ENST00000447510 CAMK2N2Q96S95 79 aa3.93□□□□□ -1.78
PROM1-201ENST00000447510 BCE1O60756 84 aa3.93□□□□□ -1.78
PROM1-201ENST00000447510 LCE6AA0A183 80 aa3.93□□□□□ -1.78
PROM1-201ENST00000447510 TENM2Q9NT68 2774 aa3.92□□□□□ -1.78
PROM1-201ENST00000447510 PDE6GP18545 87 aa3.92□□□□□ -1.78
PROM1-201ENST00000447510 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
PROM1-201ENST00000447510 DIRC1Q969H9 104 aa3.92□□□□□ -1.78
PROM1-201ENST00000447510 A8MU10 97 aa3.92□□□□□ -1.78
PROM1-201ENST00000447510 SMIM29Q86T20 159 aa3.92□□□□□ -1.78
PROM1-201ENST00000447510 DNAH9Q9NYC9 4486 aa3.92□□□□□ -1.78
PROM1-201ENST00000447510 HUWE1Q7Z6Z7 4374 aaKnown RBP3.91□□□□□ -1.78
PROM1-201ENST00000447510 CD164Q04900 197 aa3.91□□□□□ -1.78
PROM1-201ENST00000447510 C10orf25Q5T742 122 aa3.91□□□□□ -1.78
PROM1-201ENST00000447510 LOC110117498A0A087WWA1 95 aa3.91□□□□□ -1.78
PROM1-201ENST00000447510 TRAV22A0A0B4J277 110 aa3.91□□□□□ -1.78
PROM1-201ENST00000447510 UNQ6190/PRO20217Q6UXQ8 127 aa3.91□□□□□ -1.78
PROM1-201ENST00000447510 PRR15Q8IV56 129 aa3.91□□□□□ -1.78
PROM1-201ENST00000447510 Q6ZRP5 223 aa3.91□□□□□ -1.78
PROM1-201ENST00000447510 COX7BP24311 80 aa3.9□□□□□ -1.78
PROM1-201ENST00000447510 C4orf48Q5BLP8 95 aa3.9□□□□□ -1.78
PROM1-201ENST00000447510 DNAH3Q8TD57 4116 aa3.9□□□□□ -1.78
PROM1-201ENST00000447510 DEFB116Q30KQ4 102 aa3.9□□□□□ -1.79
PROM1-201ENST00000447510 PRR34Q9NV39 138 aa3.9□□□□□ -1.79
PROM1-201ENST00000447510 COL7A1Q02388 2944 aa3.9□□□□□ -1.79
PROM1-201ENST00000447510 Q8IZM0 81 aa3.9□□□□□ -1.79
PROM1-201ENST00000447510 LINC00167Q96N53 147 aa3.9□□□□□ -1.79
PROM1-201ENST00000447510 A6NED7 52 aa3.89□□□□□ -1.79
PROM1-201ENST00000447510 SYCNQ0VAF6 134 aa3.89□□□□□ -1.79
PROM1-201ENST00000447510 Q8NDZ9 215 aa3.89□□□□□ -1.79
PROM1-201ENST00000447510 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
PROM1-201ENST00000447510 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
PROM1-201ENST00000447510 PRKDCP78527 4128 aaKnown RBP3.89□□□□□ -1.79
PROM1-201ENST00000447510 hDV103S1A0JD37 113 aa3.89□□□□□ -1.79
PROM1-201ENST00000447510 IGLV5-52A0A0A0MRZ9 124 aa3.88□□□□□ -1.79
PROM1-201ENST00000447510 IGKV2-24A0A0C4DH68 120 aa3.88□□□□□ -1.79
PROM1-201ENST00000447510 IGKV4-1P06312 121 aa3.88□□□□□ -1.79
PROM1-201ENST00000447510 ZNF73O43830 326 aaPredicted RBP3.88□□□□□ -1.79
PROM1-201ENST00000447510 UBE2BP63146 152 aa3.88□□□□□ -1.79
PROM1-201ENST00000447510 RBM12B-AS1Q9P1G2 102 aa3.88□□□□□ -1.79
PROM1-201ENST00000447510 WFDC13Q8IUB5 93 aa3.87□□□□□ -1.79
PROM1-201ENST00000447510 OCR1Q9BZK8 76 aa3.87□□□□□ -1.79
PROM1-201ENST00000447510 Q6ZRU5 148 aa3.87□□□□□ -1.79
PROM1-201ENST00000447510 TNP2Q05952 138 aa3.87□□□□□ -1.79
PROM1-201ENST00000447510 A0A087WTM6 91 aa3.86□□□□□ -1.79
PROM1-201ENST00000447510 Q6ZR54 194 aa3.86□□□□□ -1.79
PROM1-201ENST00000447510 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
PROM1-201ENST00000447510 UBE2AP49459 152 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms