RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 C10orf99Q6UWK7 81 aa1.94□□□□□ -2.1
TM9SF3-202ENST00000443638 PRR15LQ9BU68 103 aa1.94□□□□□ -2.1
TM9SF3-202ENST00000443638 PSENENQ9NZ42 101 aa1.94□□□□□ -2.1
TM9SF3-202ENST00000443638 WDFY3Q8IZQ1 3526 aa1.94□□□□□ -2.1
TM9SF3-202ENST00000443638 URB1O60287 2271 aaKnown RBP1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 A0A1B0GWA3 101 aa1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 C7orf77A4D0Y5 90 aa1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 IQCF6A8MYZ5 107 aa1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 ARMS2P0C7Q2 107 aa1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 HEPN1Q6WQI6 88 aa1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 DEFB124Q8NES8 71 aa1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 LAMA4Q16363 1823 aa1.93□□□□□ -2.1
TM9SF3-202ENST00000443638 CELSR3Q9NYQ7 3312 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 DNHD1Q96M86 4753 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 MYMXA0A1B0GTQ4 84 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 NCR3O14931 201 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 MGPP08493 103 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 LYNX1P0DP58 116 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 KRTAP21-3Q3LHN1 58 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 LINC00575Q6W349 94 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 Q96NJ1 140 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 LAMA5O15230 3695 aa1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 SETD2Q9BYW2 2564 aaPredicted RBP1.92□□□□□ -2.1
TM9SF3-202ENST00000443638 TRGV1A0A0A0MS02 117 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 TRAV1-2A0A0B4J238 106 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 M0R3E3 92 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 LEPROTL1O95214 131 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 COX17Q14061 63 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 PLGLAQ15195 96 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 S100ZQ8WXG8 99 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 APC2O95996 2303 aa1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 UTP20O75691 2785 aaKnown RBP1.91□□□□□ -2.1
TM9SF3-202ENST00000443638 NCOA6Q14686 2063 aaPredicted RBP1.9□□□□□ -2.1
TM9SF3-202ENST00000443638 PCNX1Q96RV3 2341 aa1.9□□□□□ -2.1
TM9SF3-202ENST00000443638 TRBV30A0A0K0K1B3 111 aa1.9□□□□□ -2.11
TM9SF3-202ENST00000443638 D6R8Y8 96 aa1.9□□□□□ -2.11
TM9SF3-202ENST00000443638 SMIM13P0DJ93 91 aa1.9□□□□□ -2.11
TM9SF3-202ENST00000443638 ACYP2P14621 99 aa1.9□□□□□ -2.11
TM9SF3-202ENST00000443638 MUSTN1Q8IVN3 82 aa1.9□□□□□ -2.11
TM9SF3-202ENST00000443638 SMIM4Q8WVI0 70 aa1.9□□□□□ -2.11
TM9SF3-202ENST00000443638 CACNA1EQ15878 2313 aa1.9□□□□□ -2.11
TM9SF3-202ENST00000443638 ZNF236Q9UL36 1845 aa1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 ACACAQ13085 2346 aa1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 CEBPZOSA8MTT3 80 aa1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 ZNF137PP52743 207 aa1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 FBN1P35555 2871 aaKnown RBP1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 LAMA1P25391 3075 aa1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 NF1P21359 2839 aa1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 RP1L1Q8IWN7 2480 aaPredicted RBP1.89□□□□□ -2.11
TM9SF3-202ENST00000443638 MYO7BQ6PIF6 2116 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 ZFHX3Q15911 3703 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 A0A087WVE0 104 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 UMAD1C9J7I0 102 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 MGAQ8IWI9 3026 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 F8P00451 2351 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 COL6A6A6NMZ7 2263 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 AHCTF1Q8WYP5 2266 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 NBPF19A0A087WUL8 3843 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 ITPR2Q14571 2701 aa1.88□□□□□ -2.11
TM9SF3-202ENST00000443638 ATMQ13315 3056 aa1.87□□□□□ -2.11
TM9SF3-202ENST00000443638 SPINT3P49223 89 aa1.87□□□□□ -2.11
TM9SF3-202ENST00000443638 DEFB121Q5J5C9 76 aa1.87□□□□□ -2.11
TM9SF3-202ENST00000443638 FDCSPQ8NFU4 85 aa1.87□□□□□ -2.11
TM9SF3-202ENST00000443638 LINC00846Q9NV44 126 aa1.87□□□□□ -2.11
TM9SF3-202ENST00000443638 CELSR1Q9NYQ6 3014 aa1.86□□□□□ -2.11
TM9SF3-202ENST00000443638 MED13LQ71F56 2210 aa1.86□□□□□ -2.11
TM9SF3-202ENST00000443638 SPRR4Q96PI1 79 aa1.86□□□□□ -2.11
TM9SF3-202ENST00000443638 TLN1Q9Y490 2541 aaKnown RBP1.86□□□□□ -2.11
TM9SF3-202ENST00000443638 LRBAP50851 2863 aa1.86□□□□□ -2.11
TM9SF3-202ENST00000443638 USP9YO00507 2555 aaPredicted RBP1.86□□□□□ -2.11
TM9SF3-202ENST00000443638 GOLGA4Q13439 2230 aaKnown RBP1.85□□□□□ -2.11
TM9SF3-202ENST00000443638 Q6JHZ5 121 aa1.85□□□□□ -2.11
TM9SF3-202ENST00000443638 Q6ZSA8 131 aa1.85□□□□□ -2.11
TM9SF3-202ENST00000443638 UBE2D4Q9Y2X8 147 aa1.85□□□□□ -2.11
TM9SF3-202ENST00000443638 Q9Y3F1 56 aa1.85□□□□□ -2.11
TM9SF3-202ENST00000443638 BOD1L1Q8NFC6 3051 aa1.85□□□□□ -2.11
TM9SF3-202ENST00000443638 ADGRG4Q8IZF6 3080 aa1.85□□□□□ -2.11
TM9SF3-202ENST00000443638 OTOGQ6ZRI0 2925 aa1.84□□□□□ -2.11
TM9SF3-202ENST00000443638 HIVEP1P15822 2718 aa1.84□□□□□ -2.11
TM9SF3-202ENST00000443638 FLNCQ14315 2725 aa1.84□□□□□ -2.11
TM9SF3-202ENST00000443638 LRRK2Q5S007 2527 aa1.84□□□□□ -2.11
TM9SF3-202ENST00000443638 A0A096LNT2 108 aa1.84□□□□□ -2.11
TM9SF3-202ENST00000443638 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.84□□□□□ -2.11
TM9SF3-202ENST00000443638 C6orf201Q7Z4U5 140 aa1.84□□□□□ -2.11
TM9SF3-202ENST00000443638 TSC2P49815 1807 aa1.84□□□□□ -2.12
TM9SF3-202ENST00000443638 PDZD2O15018 2839 aa1.84□□□□□ -2.12
TM9SF3-202ENST00000443638 SPENQ96T58 3664 aaKnown RBP1.84□□□□□ -2.12
TM9SF3-202ENST00000443638 CELSR2Q9HCU4 2923 aa1.84□□□□□ -2.12
TM9SF3-202ENST00000443638 NBEAL1Q6ZS30 2694 aa1.84□□□□□ -2.12
TM9SF3-202ENST00000443638 CD52P31358 61 aa1.83□□□□□ -2.12
TM9SF3-202ENST00000443638 SPINK13Q1W4C9 94 aa1.83□□□□□ -2.12
TM9SF3-202ENST00000443638 ATP5EP2Q5VTU8 51 aa1.83□□□□□ -2.12
TM9SF3-202ENST00000443638 SMIM11BQ8TCY0 68 aa1.83□□□□□ -2.12
TM9SF3-202ENST00000443638 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
TM9SF3-202ENST00000443638 PROK2Q9HC23 129 aa1.83□□□□□ -2.12
TM9SF3-202ENST00000443638 ABCA2Q9BZC7 2435 aa1.83□□□□□ -2.12
TM9SF3-202ENST00000443638 MTORP42345 2549 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 CRYBG3Q68DQ2 2970 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 A0A087WWC5 75 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms