RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 DNAJC13O75165 2243 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 A0A1B0GW54 56 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 A8MUN3 132 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 G3V318 75 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 ZNF73O43830 326 aaPredicted RBP1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 HAMPP81172 84 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 BSPH1Q075Z2 132 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 Q5W150 140 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 LINC00269Q8N2A0 174 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 C5orf56Q8N8D9 126 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 USMG5Q96IX5 58 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 RHPN1-AS1Q9BWJ2 59 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 MED13Q9UHV7 2174 aa1.44□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGLV4-60A0A075B6I1 120 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGKV2D-24A0A075B6R9 120 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 HCG22E2RYF7 251 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 PSPHP1O15172 72 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGLV6-57P01721 117 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 COX7BP24311 80 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 LINC00158P58513 81 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 COX17Q14061 63 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 C7orf65Q6ZTY9 151 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 Q8IZM0 81 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 SPANXA2-OT1Q8N9U9 137 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 Q8NDZ9 215 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 Q9BRP9 147 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 LIMD2Q9BT23 127 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 CDC42SE1Q9NRR8 79 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 DMXL2Q8TDJ6 3036 aa1.43□□□□□ -2.18
HMGB3P2-201ENST00000411913 AHCTF1Q8WYP5 2266 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 WNK2Q9Y3S1 2297 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 WDFY4Q6ZS81 3184 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 DCHS2Q6V1P9 2916 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGHV3-73A0A0B4J1V6 119 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 LYNX1G3V0Z9 82 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 UBE2L6O14933 153 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGHV3-11P01762 117 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 LYNX1P0DP58 116 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 CNBPP62633 177 aaKnown RBP1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 SPINK13Q1W4C9 94 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 ASB16-AS1Q495Z4 193 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 LINC00483Q53H64 154 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 KCNQ1DNQ9H478 68 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 AKAP9Q99996 3911 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 URB1O60287 2271 aaKnown RBP1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 POLEQ07864 2286 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 KIAA1109Q2LD37 5005 aa1.42□□□□□ -2.18
HMGB3P2-201ENST00000411913 ABCA4P78363 2273 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 ALMS1Q8TCU4 4167 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGLV5-48A0A075B6I7 105 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 TRGV2A0A075B6R0 118 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 ETDCA0A1B0GVM5 59 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 LRCOL1A6NCL2 159 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 C3orf84H3BNL1 204 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 NDUFB1O75438 58 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 MOBPQ13875 183 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 C6orf99Q4VX62 202 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 SCXQ7RTU7 201 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 FDCSPQ8NFU4 85 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 C8orf17Q9NRJ1 99 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 LINC01558Q9Y6Z2 57 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 KIAA0100Q14667 2235 aaKnown RBP1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 PTPRQQ9UMZ3 2332 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 NBPF19A0A087WUL8 3843 aa1.41□□□□□ -2.18
HMGB3P2-201ENST00000411913 COL6A5A8TX70 2615 aa1.4□□□□□ -2.18
HMGB3P2-201ENST00000411913 CFAP46Q8IYW2 2715 aa1.4□□□□□ -2.18
HMGB3P2-201ENST00000411913 C2CD3Q4AC94 2353 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 ICE1Q9Y2F5 2266 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 GVQW2A0A096LPI5 108 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 LINC00959A0A1B0GUT2 108 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 H3BPC8 53 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 CHKB-CPT1BH3BT56 60 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 PRM2P04554 102 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 C9orf116Q5BN46 136 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 Q6ZQY7 126 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 C9orf163Q8N9P6 203 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 ST20-AS1Q8NBB2 130 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPRR4Q96PI1 79 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 B9D2Q9BPU9 175 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 VWFP04275 2813 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 MYO9AB2RTY4 2548 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 HIVEP2P31629 2446 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 DOPEY2Q9Y3R5 2298 aa1.4□□□□□ -2.19
HMGB3P2-201ENST00000411913 STAB1Q9NY15 2570 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 MAP1AP78559 2803 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 TRGV4A0A0C4DH28 118 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 LINC00313P59037 77 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 FBXL19-AS1Q494R0 122 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 LINC01554Q52M75 96 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 CIRBP-AS1Q8TBR5 109 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 LINC00208Q96KT6 92 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 PRR15LQ9BU68 103 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 TOMM7Q9P0U1 55 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 HRNRQ86YZ3 2850 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 CSMD1Q96PZ7 3565 aa1.39□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPG11Q96JI7 2443 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 IGKV3-7A0A075B6H7 116 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 A0A1W2PNM2 257 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 DEFB112Q30KQ8 113 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms