RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 TTC28Q96AY4 2481 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 SPTBN2O15020 2390 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 EEA1Q15075 1411 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 PREX1Q8TCU6 1659 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 NWD1Q149M9 1564 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 NESP48681 1621 aa0.61□□□□□ -2.31
PTPN12-202ENST00000407343 ABCC6O95255 1503 aa0.61□□□□□ -2.31
PTPN12-202ENST00000407343 I3L3M4 83 aa0.61□□□□□ -2.31
PTPN12-202ENST00000407343 KIF1AQ12756 1690 aa0.61□□□□□ -2.31
PTPN12-202ENST00000407343 PRXQ9BXM0 1461 aa0.61□□□□□ -2.31
PTPN12-202ENST00000407343 ALS2Q96Q42 1657 aa0.6□□□□□ -2.31
PTPN12-202ENST00000407343 Q5VSD8 79 aa0.6□□□□□ -2.31
PTPN12-202ENST00000407343 MRPL34Q9BQ48 92 aaKnown RBP0.6□□□□□ -2.31
PTPN12-202ENST00000407343 KCNQ1DNQ9H478 68 aa0.6□□□□□ -2.31
PTPN12-202ENST00000407343 PLCE1Q9P212 2302 aa0.6□□□□□ -2.31
PTPN12-202ENST00000407343 BIVM-ERCC5R4GMW8 1640 aa0.6□□□□□ -2.31
PTPN12-202ENST00000407343 CNOT1A5YKK6 2376 aaKnown RBP0.6□□□□□ -2.31
PTPN12-202ENST00000407343 COX6B1P14854 86 aa0.59□□□□□ -2.31
PTPN12-202ENST00000407343 SPRR1AP35321 89 aa0.59□□□□□ -2.31
PTPN12-202ENST00000407343 UBL5Q9BZL1 73 aa0.59□□□□□ -2.31
PTPN12-202ENST00000407343 GVINP1Q7Z2Y8 2422 aa0.59□□□□□ -2.32
PTPN12-202ENST00000407343 TSC2P49815 1807 aa0.59□□□□□ -2.32
PTPN12-202ENST00000407343 PTPRZ1P23471 2315 aaPredicted RBP0.59□□□□□ -2.32
PTPN12-202ENST00000407343 ABCA10Q8WWZ4 1543 aa0.59□□□□□ -2.32
PTPN12-202ENST00000407343 F8P00451 2351 aa0.59□□□□□ -2.32
PTPN12-202ENST00000407343 ABCA12Q86UK0 2595 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 REV3LO60673 3130 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 MAST1Q9Y2H9 1570 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 DOPEY2Q9Y3R5 2298 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 KRTAP2-3P0C7H8 128 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 SPRR1BP22528 89 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 LELP1Q5T871 98 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 KRTAP2-4Q9BYR9 128 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
PTPN12-202ENST00000407343 SPTBN1Q01082 2364 aaKnown RBP0.57□□□□□ -2.32
PTPN12-202ENST00000407343 USF3Q68DE3 2245 aa0.57□□□□□ -2.32
PTPN12-202ENST00000407343 RNF17Q9BXT8 1623 aaKnown RBP0.57□□□□□ -2.32
PTPN12-202ENST00000407343 TNRC6CQ9HCJ0 1690 aaKnown RBP0.57□□□□□ -2.32
PTPN12-202ENST00000407343 ITSN2Q9NZM3 1697 aa0.57□□□□□ -2.32
PTPN12-202ENST00000407343 NDUFA3O95167 84 aa0.57□□□□□ -2.32
PTPN12-202ENST00000407343 COX6B2Q6YFQ2 88 aa0.57□□□□□ -2.32
PTPN12-202ENST00000407343 SMR3AQ99954 134 aa0.57□□□□□ -2.32
PTPN12-202ENST00000407343 CPS1P31327 1500 aa0.57□□□□□ -2.32
PTPN12-202ENST00000407343 CELSR2Q9HCU4 2923 aa0.57□□□□□ -2.32
PTPN12-202ENST00000407343 PTPRQQ9UMZ3 2332 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 MROH2AA6NES4 1674 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 TNCP24821 2201 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 DEFB131BA0A096LNP1 70 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 ETDCA0A1B0GVM5 59 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 K7EMI3 77 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 CCL22O00626 93 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 DEFB114Q30KQ6 69 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 APLNQ9ULZ1 77 aa0.56□□□□□ -2.32
PTPN12-202ENST00000407343 TJP1Q07157 1748 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 CLASP1Q7Z460 1538 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 UGGT1Q9NYU2 1555 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 CRIP1P50238 77 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 H1FX-AS1Q4G0G2 97 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 TRANK1O15050 2925 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 CHD6Q8TD26 2715 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 LY75O60449 1722 aa0.55□□□□□ -2.32
PTPN12-202ENST00000407343 ATRQ13535 2644 aa0.54□□□□□ -2.32
PTPN12-202ENST00000407343 SYCP2Q9BX26 1530 aa0.54□□□□□ -2.32
PTPN12-202ENST00000407343 C3P01024 1663 aa0.54□□□□□ -2.32
PTPN12-202ENST00000407343 FCER1GP30273 86 aa0.54□□□□□ -2.32
PTPN12-202ENST00000407343 DEFB105AQ8NG35 78 aa0.54□□□□□ -2.32
PTPN12-202ENST00000407343 DDX60LQ5H9U9 1706 aaKnown RBP0.54□□□□□ -2.32
PTPN12-202ENST00000407343 FANCD2Q9BXW9 1451 aa0.54□□□□□ -2.32
PTPN12-202ENST00000407343 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
PTPN12-202ENST00000407343 ANK2Q01484 3957 aa0.53□□□□□ -2.32
PTPN12-202ENST00000407343 BPTFQ12830 3046 aa0.53□□□□□ -2.32
PTPN12-202ENST00000407343 H0YAA0 97 aa0.53□□□□□ -2.32
PTPN12-202ENST00000407343 KLK9Q2XQG4 91 aa0.53□□□□□ -2.32
PTPN12-202ENST00000407343 PRO3102Q9H379 93 aa0.53□□□□□ -2.32
PTPN12-202ENST00000407343 CDKN2A-AS1Q9UH64 79 aa0.53□□□□□ -2.32
PTPN12-202ENST00000407343 CSMD3Q7Z407 3707 aa0.52□□□□□ -2.33
PTPN12-202ENST00000407343 M0R1W7 72 aa0.52□□□□□ -2.33
PTPN12-202ENST00000407343 MRPL33O75394 65 aaKnown RBP0.52□□□□□ -2.33
PTPN12-202ENST00000407343 WFDC13Q8IUB5 93 aa0.52□□□□□ -2.33
PTPN12-202ENST00000407343 FXYD6Q9H0Q3 95 aa0.52□□□□□ -2.33
PTPN12-202ENST00000407343 DSPP15924 2871 aaKnown RBP0.52□□□□□ -2.33
PTPN12-202ENST00000407343 IGIPA6NJ69 53 aa0.51□□□□□ -2.33
PTPN12-202ENST00000407343 LOC730098B7Z3J9 87 aa0.51□□□□□ -2.33
PTPN12-202ENST00000407343 CROCC2H7BZ55 1655 aa0.51□□□□□ -2.33
PTPN12-202ENST00000407343 TPRP12270 2363 aaKnown RBP0.51□□□□□ -2.33
PTPN12-202ENST00000407343 LINC00158P58513 81 aa0.51□□□□□ -2.33
PTPN12-202ENST00000407343 TENM4Q6N022 2769 aa0.51□□□□□ -2.33
PTPN12-202ENST00000407343 OTOGQ6ZRI0 2925 aa0.51□□□□□ -2.33
PTPN12-202ENST00000407343 AKAP6Q13023 2319 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 NCBP2-AS2Q69YL0 99 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 NMES1Q9C002 83 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 VWFP04275 2813 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 AKAP13Q12802 2813 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 C4AP0C0L4 1744 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 C4BP0C0L5 1744 aa0.5□□□□□ -2.33
PTPN12-202ENST00000407343 PKD1L2Q7Z442 2459 aa0.49□□□□□ -2.33
PTPN12-202ENST00000407343 AGLP35573 1532 aa0.49□□□□□ -2.33
PTPN12-202ENST00000407343 SNRPGP15A8MWD9 76 aa0.49□□□□□ -2.33
PTPN12-202ENST00000407343 LYNX1G3V0Z9 82 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms