RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 IGKV3D-7A0A0C4DH55 119 aa12.04□□□□□ -0.48
SIL1-202ENST00000394817 DSCR8Q96T75 97 aa12.04□□□□□ -0.48
SIL1-202ENST00000394817 PDE6GP18545 87 aa12.03□□□□□ -0.48
SIL1-202ENST00000394817 DNAH7Q8WXX0 4024 aa12.03□□□□□ -0.48
SIL1-202ENST00000394817 HIST1H4AP62805 103 aaKnown RBP12.02□□□□□ -0.49
SIL1-202ENST00000394817 ATP5EP2Q5VTU8 51 aa12.02□□□□□ -0.49
SIL1-202ENST00000394817 KRTAP1-5Q9BYS1 174 aa12.01□□□□□ -0.49
SIL1-202ENST00000394817 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
SIL1-202ENST00000394817 TRBV7-4A0A0J9YYF1 115 aa12□□□□□ -0.49
SIL1-202ENST00000394817 LOC107984640A0A0U1RRK4 108 aa12□□□□□ -0.49
SIL1-202ENST00000394817 FAM168BA1KXE4 195 aa12□□□□□ -0.49
SIL1-202ENST00000394817 UBL5Q9BZL1 73 aa12□□□□□ -0.49
SIL1-202ENST00000394817 APLNQ9ULZ1 77 aa11.99□□□□□ -0.49
SIL1-202ENST00000394817 PRYO14603 147 aa11.99□□□□□ -0.49
SIL1-202ENST00000394817 KRTAP7-1Q8IUC3 87 aa11.99□□□□□ -0.49
SIL1-202ENST00000394817 PLECQ15149 4684 aaKnown RBP11.99□□□□□ -0.49
SIL1-202ENST00000394817 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
SIL1-202ENST00000394817 M0R2N4 97 aa11.98□□□□□ -0.49
SIL1-202ENST00000394817 KRTAP4-16G5E9R7 235 aaPredicted RBP11.97□□□□□ -0.49
SIL1-202ENST00000394817 TENM2Q9NT68 2774 aa11.96□□□□□ -0.49
SIL1-202ENST00000394817 DNAH10Q8IVF4 4471 aa11.96□□□□□ -0.49
SIL1-202ENST00000394817 SPRR1AP35321 89 aa11.96□□□□□ -0.49
SIL1-202ENST00000394817 UBE2DNLQ8IWF7 75 aa11.96□□□□□ -0.49
SIL1-202ENST00000394817 RPL37AP8A6NKH3 93 aa11.95□□□□□ -0.5
SIL1-202ENST00000394817 KRTAP21-3Q3LHN1 58 aa11.95□□□□□ -0.5
SIL1-202ENST00000394817 Q6ZRX8 168 aa11.95□□□□□ -0.5
SIL1-202ENST00000394817 STARD9Q9P2P6 4700 aa11.95□□□□□ -0.5
SIL1-202ENST00000394817 ATOX1O00244 68 aa11.94□□□□□ -0.5
SIL1-202ENST00000394817 MRPL55Q7Z7F7 128 aaKnown RBP11.94□□□□□ -0.5
SIL1-202ENST00000394817 DHRS4-AS1Q9P1J3 65 aa11.94□□□□□ -0.5
SIL1-202ENST00000394817 A0A087WVE0 104 aa11.93□□□□□ -0.5
SIL1-202ENST00000394817 B5MCH6 92 aa11.93□□□□□ -0.5
SIL1-202ENST00000394817 CNBPP62633 177 aaKnown RBP11.93□□□□□ -0.5
SIL1-202ENST00000394817 FAM19A5Q7Z5A7 132 aaPredicted RBP11.93□□□□□ -0.5
SIL1-202ENST00000394817 PSCAO43653 123 aa11.91□□□□□ -0.5
SIL1-202ENST00000394817 ETDCA0A1B0GVM5 59 aa11.9□□□□□ -0.5
SIL1-202ENST00000394817 Q6ZVQ6 151 aa11.9□□□□□ -0.5
SIL1-202ENST00000394817 Q9BRP9 147 aa11.9□□□□□ -0.5
SIL1-202ENST00000394817 NUPR2A6NF83 97 aa11.9□□□□□ -0.51
SIL1-202ENST00000394817 Q8N377 158 aa11.89□□□□□ -0.51
SIL1-202ENST00000394817 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
SIL1-202ENST00000394817 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
SIL1-202ENST00000394817 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
SIL1-202ENST00000394817 UQCRQO14949 82 aa11.87□□□□□ -0.51
SIL1-202ENST00000394817 A0A096LNI7 61 aa11.86□□□□□ -0.51
SIL1-202ENST00000394817 C14orf177Q52M58 125 aa11.86□□□□□ -0.51
SIL1-202ENST00000394817 C3orf22Q8N5N4 141 aa11.86□□□□□ -0.51
SIL1-202ENST00000394817 FAM19A1Q7Z5A9 133 aa11.85□□□□□ -0.51
SIL1-202ENST00000394817 COX7CP15954 63 aa11.84□□□□□ -0.51
SIL1-202ENST00000394817 DEFB105AQ8NG35 78 aa11.84□□□□□ -0.51
SIL1-202ENST00000394817 IGLV5-48A0A075B6I7 105 aa11.84□□□□□ -0.51
SIL1-202ENST00000394817 CXCL6P80162 114 aa11.83□□□□□ -0.52
SIL1-202ENST00000394817 REG3GQ6UW15 175 aa11.83□□□□□ -0.52
SIL1-202ENST00000394817 HAMPP81172 84 aa11.82□□□□□ -0.52
SIL1-202ENST00000394817 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
SIL1-202ENST00000394817 VPS13DQ5THJ4 4388 aa11.81□□□□□ -0.52
SIL1-202ENST00000394817 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
SIL1-202ENST00000394817 C9orf153Q5TBE3 101 aa11.8□□□□□ -0.52
SIL1-202ENST00000394817 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.79□□□□□ -0.52
SIL1-202ENST00000394817 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
SIL1-202ENST00000394817 SS18L2Q9UHA2 77 aa11.79□□□□□ -0.52
SIL1-202ENST00000394817 UBE2BP63146 152 aa11.78□□□□□ -0.52
SIL1-202ENST00000394817 TNP2Q05952 138 aa11.78□□□□□ -0.52
SIL1-202ENST00000394817 SERP2Q8N6R1 65 aa11.78□□□□□ -0.52
SIL1-202ENST00000394817 ST20-AS1Q8NBB2 130 aa11.78□□□□□ -0.52
SIL1-202ENST00000394817 ERC2-IT1O76042 136 aa11.78□□□□□ -0.52
SIL1-202ENST00000394817 LRCOL1A6NCL2 159 aa11.77□□□□□ -0.53
SIL1-202ENST00000394817 TGP01266 2768 aa11.76□□□□□ -0.53
SIL1-202ENST00000394817 Q6ZRN7 208 aaPredicted RBP11.75□□□□□ -0.53
SIL1-202ENST00000394817 CRYGAP11844 174 aa11.74□□□□□ -0.53
SIL1-202ENST00000394817 C9orf163Q8N9P6 203 aa11.74□□□□□ -0.53
SIL1-202ENST00000394817 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
SIL1-202ENST00000394817 A0A1B0GW54 56 aa11.72□□□□□ -0.53
SIL1-202ENST00000394817 CHTF8P0CG12 524 aa11.71□□□□□ -0.53
SIL1-202ENST00000394817 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
SIL1-202ENST00000394817 BCE1O60756 84 aa11.7□□□□□ -0.54
SIL1-202ENST00000394817 FUSP35637 526 aaKnown RBP eCLIP11.7□□□□□ -0.54
SIL1-202ENST00000394817 SCXQ7RTU7 201 aa11.7□□□□□ -0.54
SIL1-202ENST00000394817 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
SIL1-202ENST00000394817 A0A1W2PNM2 257 aa11.68□□□□□ -0.54
SIL1-202ENST00000394817 NREPQ16612 68 aa11.68□□□□□ -0.54
SIL1-202ENST00000394817 PRLHP81277 87 aa11.68□□□□□ -0.54
SIL1-202ENST00000394817 SMIM29Q86T20 159 aa11.68□□□□□ -0.54
SIL1-202ENST00000394817 Q8NBF4 154 aa11.67□□□□□ -0.54
SIL1-202ENST00000394817 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
SIL1-202ENST00000394817 KMT2AQ03164 3969 aa11.66□□□□□ -0.54
SIL1-202ENST00000394817 LINC00474Q9P2X8 69 aa11.66□□□□□ -0.54
SIL1-202ENST00000394817 SPRR4Q96PI1 79 aa11.65□□□□□ -0.54
SIL1-202ENST00000394817 KRTAP11-1Q8IUC1 163 aa11.64□□□□□ -0.55
SIL1-202ENST00000394817 H0Y9J4 135 aa11.63□□□□□ -0.55
SIL1-202ENST00000394817 HIGD2AQ9BW72 106 aa11.62□□□□□ -0.55
SIL1-202ENST00000394817 F8WEM9 126 aa11.62□□□□□ -0.55
SIL1-202ENST00000394817 SMIM20Q8N5G0 67 aa11.62□□□□□ -0.55
SIL1-202ENST00000394817 BPY2O14599 106 aa11.61□□□□□ -0.55
SIL1-202ENST00000394817 LINC00476Q8WZB0 136 aa11.61□□□□□ -0.55
SIL1-202ENST00000394817 CYSTM1Q9H1C7 97 aa11.61□□□□□ -0.55
SIL1-202ENST00000394817 TRAV7A0A075B6U4 112 aa11.6□□□□□ -0.55
SIL1-202ENST00000394817 IGKV4-1P06312 121 aa11.6□□□□□ -0.55
SIL1-202ENST00000394817 DNAH2Q9P225 4427 aa11.59□□□□□ -0.55
SIL1-202ENST00000394817 IGLV8-61A0A075B6I0 122 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms