RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
THUMPD2-201ENST00000378727 hADV29S1A0JD25 119 aa11.04□□□□□ -0.64
THUMPD2-201ENST00000378727 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
THUMPD2-201ENST00000378727 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
THUMPD2-201ENST00000378727 ORMDL1Q9P0S3 153 aa11.04□□□□□ -0.64
THUMPD2-201ENST00000378727 DNAH6Q9C0G6 4158 aa11.03□□□□□ -0.64
THUMPD2-201ENST00000378727 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
THUMPD2-201ENST00000378727 ALMS1Q8TCU4 4167 aa11.02□□□□□ -0.65
THUMPD2-201ENST00000378727 SNCGO76070 127 aa11.01□□□□□ -0.65
THUMPD2-201ENST00000378727 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.65
THUMPD2-201ENST00000378727 PRYO14603 147 aa10.99□□□□□ -0.65
THUMPD2-201ENST00000378727 KRTAP4-16G5E9R7 235 aaPredicted RBP10.99□□□□□ -0.65
THUMPD2-201ENST00000378727 SPRR1AP35321 89 aa10.99□□□□□ -0.65
THUMPD2-201ENST00000378727 VPS25Q9BRG1 176 aa10.99□□□□□ -0.65
THUMPD2-201ENST00000378727 PANO1I0J062 215 aa10.98□□□□□ -0.65
THUMPD2-201ENST00000378727 Q6ZQY7 126 aa10.98□□□□□ -0.65
THUMPD2-201ENST00000378727 PKIGQ9Y2B9 76 aa10.97□□□□□ -0.65
THUMPD2-201ENST00000378727 OBSCN-AS1Q96MR7 158 aa10.96□□□□□ -0.65
THUMPD2-201ENST00000378727 TMEM256-PLSCR3K7ERE1 68 aa10.96□□□□□ -0.66
THUMPD2-201ENST00000378727 RTL8CO15255 209 aa10.95□□□□□ -0.66
THUMPD2-201ENST00000378727 HECTD4Q9Y4D8 3996 aa10.95□□□□□ -0.66
THUMPD2-201ENST00000378727 B5MCH6 92 aa10.94□□□□□ -0.66
THUMPD2-201ENST00000378727 DNAH17Q9UFH2 4485 aa10.94□□□□□ -0.66
THUMPD2-201ENST00000378727 TNP2Q05952 138 aa10.94□□□□□ -0.66
THUMPD2-201ENST00000378727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.94□□□□□ -0.66
THUMPD2-201ENST00000378727 Q6ZRX8 168 aa10.94□□□□□ -0.66
THUMPD2-201ENST00000378727 LINC00474Q9P2X8 69 aa10.94□□□□□ -0.66
THUMPD2-201ENST00000378727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
THUMPD2-201ENST00000378727 PHF5AQ7RTV0 110 aaKnown RBP10.93□□□□□ -0.66
THUMPD2-201ENST00000378727 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
THUMPD2-201ENST00000378727 ETDCA0A1B0GVM5 59 aa10.91□□□□□ -0.66
THUMPD2-201ENST00000378727 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
THUMPD2-201ENST00000378727 SPACA4Q8TDM5 124 aa10.91□□□□□ -0.66
THUMPD2-201ENST00000378727 Q9BRP9 147 aa10.91□□□□□ -0.66
THUMPD2-201ENST00000378727 CDIP1Q9H305 208 aa10.91□□□□□ -0.66
THUMPD2-201ENST00000378727 HYDINQ4G0P3 5121 aa10.91□□□□□ -0.66
THUMPD2-201ENST00000378727 INAFM2P0DMQ5 153 aa10.91□□□□□ -0.66
THUMPD2-201ENST00000378727 A0A1B0GV72 72 aa10.9□□□□□ -0.66
THUMPD2-201ENST00000378727 C14orf132Q9NPU4 83 aa10.9□□□□□ -0.66
THUMPD2-201ENST00000378727 FRAS1Q86XX4 4008 aa10.89□□□□□ -0.67
THUMPD2-201ENST00000378727 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
THUMPD2-201ENST00000378727 DHRS4-AS1Q9P1J3 65 aa10.88□□□□□ -0.67
THUMPD2-201ENST00000378727 EPM2AB3EWF7 344 aa10.87□□□□□ -0.67
THUMPD2-201ENST00000378727 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
THUMPD2-201ENST00000378727 H3BQ85 93 aa10.86□□□□□ -0.67
THUMPD2-201ENST00000378727 FAM240AA0A1B0GVK7 77 aa10.86□□□□□ -0.67
THUMPD2-201ENST00000378727 JMJD7-PLA2G4BH0Y9G9 81 aa10.86□□□□□ -0.67
THUMPD2-201ENST00000378727 UBE2BP63146 152 aa10.85□□□□□ -0.67
THUMPD2-201ENST00000378727 LAMTOR3Q9UHA4 124 aa10.84□□□□□ -0.67
THUMPD2-201ENST00000378727 ERC2-IT1O76042 136 aa10.83□□□□□ -0.68
THUMPD2-201ENST00000378727 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
THUMPD2-201ENST00000378727 KRTAP10-2P60368 255 aa10.83□□□□□ -0.68
THUMPD2-201ENST00000378727 SMCR5Q8TEV8 140 aa10.83□□□□□ -0.68
THUMPD2-201ENST00000378727 GHRHP01286 108 aa10.82□□□□□ -0.68
THUMPD2-201ENST00000378727 GAGE2AQ6NT46 116 aa10.82□□□□□ -0.68
THUMPD2-201ENST00000378727 FAM19A1Q7Z5A9 133 aa10.82□□□□□ -0.68
THUMPD2-201ENST00000378727 PRLHP81277 87 aa10.81□□□□□ -0.68
THUMPD2-201ENST00000378727 RBM3P98179 157 aaKnown RBP10.8□□□□□ -0.68
THUMPD2-201ENST00000378727 Q8N377 158 aa10.8□□□□□ -0.68
THUMPD2-201ENST00000378727 ST20-AS1Q8NBB2 130 aa10.8□□□□□ -0.68
THUMPD2-201ENST00000378727 DNAH11Q96DT5 4516 aa10.8□□□□□ -0.68
THUMPD2-201ENST00000378727 XGP55808 180 aa10.8□□□□□ -0.68
THUMPD2-201ENST00000378727 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
THUMPD2-201ENST00000378727 DEFB105AQ8NG35 78 aa10.8□□□□□ -0.68
THUMPD2-201ENST00000378727 ACYP1P07311 99 aa10.79□□□□□ -0.68
THUMPD2-201ENST00000378727 PLAC8Q9NZF1 115 aa10.78□□□□□ -0.68
THUMPD2-201ENST00000378727 CCKP06307 115 aa10.78□□□□□ -0.68
THUMPD2-201ENST00000378727 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.68
THUMPD2-201ENST00000378727 IGLV5-48A0A075B6I7 105 aa10.77□□□□□ -0.69
THUMPD2-201ENST00000378727 SIGMAR1Q99720 223 aa10.77□□□□□ -0.69
THUMPD2-201ENST00000378727 SACSQ9NZJ4 4579 aa10.77□□□□□ -0.69
THUMPD2-201ENST00000378727 LOC110117498A0A087WWA1 95 aa10.75□□□□□ -0.69
THUMPD2-201ENST00000378727 MT-ATP8P03928 68 aa10.75□□□□□ -0.69
THUMPD2-201ENST00000378727 Q6ZQT0 140 aa10.75□□□□□ -0.69
THUMPD2-201ENST00000378727 DNAH5Q8TE73 4624 aa10.75□□□□□ -0.69
THUMPD2-201ENST00000378727 LCE6AA0A183 80 aa10.75□□□□□ -0.69
THUMPD2-201ENST00000378727 H0Y9J4 135 aa10.75□□□□□ -0.69
THUMPD2-201ENST00000378727 HIGD2AQ9BW72 106 aa10.74□□□□□ -0.69
THUMPD2-201ENST00000378727 BCE1O60756 84 aa10.73□□□□□ -0.69
THUMPD2-201ENST00000378727 DSCR8Q96T75 97 aa10.73□□□□□ -0.69
THUMPD2-201ENST00000378727 PKD1P98161 4303 aa10.73□□□□□ -0.69
THUMPD2-201ENST00000378727 C3orf22Q8N5N4 141 aa10.73□□□□□ -0.69
THUMPD2-201ENST00000378727 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
THUMPD2-201ENST00000378727 KRTAP13-1Q8IUC0 172 aa10.72□□□□□ -0.69
THUMPD2-201ENST00000378727 FAM30AQ9NZY2 134 aa10.72□□□□□ -0.69
THUMPD2-201ENST00000378727 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.69
THUMPD2-201ENST00000378727 LINC00846Q9NV44 126 aa10.71□□□□□ -0.69
THUMPD2-201ENST00000378727 UBE2AP49459 152 aa10.7□□□□□ -0.7
THUMPD2-201ENST00000378727 PDE6GP18545 87 aa10.69□□□□□ -0.7
THUMPD2-201ENST00000378727 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
THUMPD2-201ENST00000378727 SMIM29Q86T20 159 aa10.68□□□□□ -0.7
THUMPD2-201ENST00000378727 PSORS1C2Q9UIG4 136 aa10.68□□□□□ -0.7
THUMPD2-201ENST00000378727 SRRM2Q9UQ35 2752 aaKnown RBP10.67□□□□□ -0.7
THUMPD2-201ENST00000378727 Q6ZSA8 131 aa10.65□□□□□ -0.7
THUMPD2-201ENST00000378727 CIRBP-AS1Q8TBR5 109 aa10.65□□□□□ -0.7
THUMPD2-201ENST00000378727 LINC00643Q86TS7 51 aa10.64□□□□□ -0.71
THUMPD2-201ENST00000378727 SCXQ7RTU7 201 aa10.62□□□□□ -0.71
THUMPD2-201ENST00000378727 C1orf137Q5JT78 98 aa10.61□□□□□ -0.71
THUMPD2-201ENST00000378727 SPRR1BP22528 89 aa10.61□□□□□ -0.71
THUMPD2-201ENST00000378727 HAMPP81172 84 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms