RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 C9orf163Q8N9P6 203 aa16.39■□□□□ 0.21
CLK2-201ENST00000355560 KMT2AQ03164 3969 aa16.39■□□□□ 0.21
CLK2-201ENST00000355560 OBSCN-AS1Q96MR7 158 aa16.39■□□□□ 0.21
CLK2-201ENST00000355560 A0A1B0GV72 72 aa16.37■□□□□ 0.21
CLK2-201ENST00000355560 LY6G6CO95867 125 aa16.37■□□□□ 0.21
CLK2-201ENST00000355560 PRYO14603 147 aa16.37■□□□□ 0.21
CLK2-201ENST00000355560 C14orf132Q9NPU4 83 aa16.37■□□□□ 0.21
CLK2-201ENST00000355560 FAM240AA0A1B0GVK7 77 aa16.36■□□□□ 0.21
CLK2-201ENST00000355560 A0A087WTM6 91 aa16.34■□□□□ 0.21
CLK2-201ENST00000355560 CHTF8P0CG12 524 aa16.34■□□□□ 0.21
CLK2-201ENST00000355560 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.34■□□□□ 0.21
CLK2-201ENST00000355560 A0A1W2PNN7 141 aa16.34■□□□□ 0.21
CLK2-201ENST00000355560 SIGMAR1Q99720 223 aa16.33■□□□□ 0.21
CLK2-201ENST00000355560 PKIGQ9Y2B9 76 aa16.32■□□□□ 0.2
CLK2-201ENST00000355560 SPRR1AP35321 89 aa16.31■□□□□ 0.2
CLK2-201ENST00000355560 KRTAP4-16G5E9R7 235 aaPredicted RBP16.3■□□□□ 0.2
CLK2-201ENST00000355560 JMJD7-PLA2G4BH0Y9G9 81 aa16.3■□□□□ 0.2
CLK2-201ENST00000355560 SDIM1Q6ZPB5 146 aa16.3■□□□□ 0.2
CLK2-201ENST00000355560 LINC00476Q8WZB0 136 aa16.3■□□□□ 0.2
CLK2-201ENST00000355560 XGP55808 180 aa16.3■□□□□ 0.2
CLK2-201ENST00000355560 GAGE2AQ6NT46 116 aa16.29■□□□□ 0.2
CLK2-201ENST00000355560 Q6ZRX8 168 aa16.29■□□□□ 0.2
CLK2-201ENST00000355560 ETDCA0A1B0GVM5 59 aa16.28■□□□□ 0.2
CLK2-201ENST00000355560 H3BQ85 93 aa16.28■□□□□ 0.2
CLK2-201ENST00000355560 C1orf134Q5TEV5 83 aa16.28■□□□□ 0.2
CLK2-201ENST00000355560 DNAH2Q9P225 4427 aa16.27■□□□□ 0.19
CLK2-201ENST00000355560 B5MCH6 92 aa16.27■□□□□ 0.19
CLK2-201ENST00000355560 ACYP1P07311 99 aa16.27■□□□□ 0.19
CLK2-201ENST00000355560 LAMTOR3Q9UHA4 124 aa16.26■□□□□ 0.19
CLK2-201ENST00000355560 GHRHP01286 108 aa16.25■□□□□ 0.19
CLK2-201ENST00000355560 REG3GQ6UW15 175 aa16.25■□□□□ 0.19
CLK2-201ENST00000355560 MT-ATP8P03928 68 aa16.24■□□□□ 0.19
CLK2-201ENST00000355560 LINC00474Q9P2X8 69 aa16.24■□□□□ 0.19
CLK2-201ENST00000355560 Q9BRP9 147 aa16.22■□□□□ 0.19
CLK2-201ENST00000355560 DHRS4-AS1Q9P1J3 65 aa16.22■□□□□ 0.19
CLK2-201ENST00000355560 FUSP35637 526 aaKnown RBP eCLIP16.21■□□□□ 0.18
CLK2-201ENST00000355560 PANO1I0J062 215 aa16.2■□□□□ 0.18
CLK2-201ENST00000355560 RBM3P98179 157 aaKnown RBP16.19■□□□□ 0.18
CLK2-201ENST00000355560 PHF5AQ7RTV0 110 aaKnown RBP16.19■□□□□ 0.18
CLK2-201ENST00000355560 RTL8CO15255 209 aa16.19■□□□□ 0.18
CLK2-201ENST00000355560 C3orf84H3BNL1 204 aa16.18■□□□□ 0.18
CLK2-201ENST00000355560 CCKP06307 115 aa16.16■□□□□ 0.18
CLK2-201ENST00000355560 UBE2BP63146 152 aa16.16■□□□□ 0.18
CLK2-201ENST00000355560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.15■□□□□ 0.18
CLK2-201ENST00000355560 SPACA4Q8TDM5 124 aa16.14■□□□□ 0.17
CLK2-201ENST00000355560 DPH3Q96FX2 82 aa16.14■□□□□ 0.17
CLK2-201ENST00000355560 NDUFV3P56181 108 aaKnown RBP16.13■□□□□ 0.17
CLK2-201ENST00000355560 SMCR5Q8TEV8 140 aa16.13■□□□□ 0.17
CLK2-201ENST00000355560 DEFB105AQ8NG35 78 aa16.13■□□□□ 0.17
CLK2-201ENST00000355560 KRTAP11-1Q8IUC1 163 aa16.12■□□□□ 0.17
CLK2-201ENST00000355560 DNAH6Q9C0G6 4158 aa16.11■□□□□ 0.17
CLK2-201ENST00000355560 FAM19A1Q7Z5A9 133 aa16.11■□□□□ 0.17
CLK2-201ENST00000355560 DSCR8Q96T75 97 aa16.11■□□□□ 0.17
CLK2-201ENST00000355560 ALMS1Q8TCU4 4167 aa16.1■□□□□ 0.17
CLK2-201ENST00000355560 LOC110117498A0A087WWA1 95 aa16.1■□□□□ 0.17
CLK2-201ENST00000355560 IGLV5-52A0A0A0MRZ9 124 aa16.09■□□□□ 0.17
CLK2-201ENST00000355560 ERC2-IT1O76042 136 aa16.09■□□□□ 0.17
CLK2-201ENST00000355560 PRLHP81277 87 aa16.09■□□□□ 0.17
CLK2-201ENST00000355560 TNP2Q05952 138 aa16.09■□□□□ 0.17
CLK2-201ENST00000355560 Q6ZQT0 140 aa16.09■□□□□ 0.17
CLK2-201ENST00000355560 PCP4P48539 62 aa16.09■□□□□ 0.17
CLK2-201ENST00000355560 LINC01547P58512 204 aaPredicted RBP16.09■□□□□ 0.17
CLK2-201ENST00000355560 Q8N377 158 aa16.09■□□□□ 0.17
CLK2-201ENST00000355560 HECTD4Q9Y4D8 3996 aa16.08■□□□□ 0.16
CLK2-201ENST00000355560 ST20-AS1Q8NBB2 130 aa16.08■□□□□ 0.16
CLK2-201ENST00000355560 DNAH17Q9UFH2 4485 aa16.08■□□□□ 0.16
CLK2-201ENST00000355560 LINC00846Q9NV44 126 aa16.07■□□□□ 0.16
CLK2-201ENST00000355560 LINC00643Q86TS7 51 aa16.04■□□□□ 0.16
CLK2-201ENST00000355560 IGLV5-48A0A075B6I7 105 aa16.03■□□□□ 0.16
CLK2-201ENST00000355560 TRBV7-4A0A0J9YYF1 115 aa16.03■□□□□ 0.16
CLK2-201ENST00000355560 SCGB1A1P11684 91 aa16.03■□□□□ 0.16
CLK2-201ENST00000355560 PDE6GP18545 87 aa16.03■□□□□ 0.16
CLK2-201ENST00000355560 EPM2AB3EWF7 344 aa16.01■□□□□ 0.15
CLK2-201ENST00000355560 HIGD2AQ9BW72 106 aa16.01■□□□□ 0.15
CLK2-201ENST00000355560 C3orf22Q8N5N4 141 aa16■□□□□ 0.15
CLK2-201ENST00000355560 HYDINQ4G0P3 5121 aa15.98■□□□□ 0.15
CLK2-201ENST00000355560 H0Y9J4 135 aa15.95■□□□□ 0.14
CLK2-201ENST00000355560 FRAS1Q86XX4 4008 aa15.94■□□□□ 0.14
CLK2-201ENST00000355560 UBE2AP49459 152 aa15.94■□□□□ 0.14
CLK2-201ENST00000355560 TRBV7-7A0A0K0K1E9 115 aa15.93■□□□□ 0.14
CLK2-201ENST00000355560 BCE1O60756 84 aa15.92■□□□□ 0.14
CLK2-201ENST00000355560 PLAC8Q9NZF1 115 aa15.92■□□□□ 0.14
CLK2-201ENST00000355560 KRTAP10-2P60368 255 aa15.92■□□□□ 0.14
CLK2-201ENST00000355560 Q6Q795 121 aa15.91■□□□□ 0.14
CLK2-201ENST00000355560 C21orf62-AS1Q17RA5 79 aa15.91■□□□□ 0.14
CLK2-201ENST00000355560 UBL5Q9BZL1 73 aa15.88■□□□□ 0.13
CLK2-201ENST00000355560 Q6JHZ5 121 aa15.86■□□□□ 0.13
CLK2-201ENST00000355560 SMIM29Q86T20 159 aa15.86■□□□□ 0.13
CLK2-201ENST00000355560 KRTAP13-1Q8IUC0 172 aa15.85■□□□□ 0.13
CLK2-201ENST00000355560 IMUPQ9GZP8 106 aa15.85■□□□□ 0.13
CLK2-201ENST00000355560 IGKV3D-7A0A0C4DH55 119 aa15.83■□□□□ 0.13
CLK2-201ENST00000355560 DNAH11Q96DT5 4516 aa15.83■□□□□ 0.12
CLK2-201ENST00000355560 DNAH5Q8TE73 4624 aa15.82■□□□□ 0.12
CLK2-201ENST00000355560 C1orf137Q5JT78 98 aa15.82■□□□□ 0.12
CLK2-201ENST00000355560 DNAH8Q96JB1 4490 aa15.8■□□□□ 0.12
CLK2-201ENST00000355560 F8WEM9 126 aa15.8■□□□□ 0.12
CLK2-201ENST00000355560 PSORS1C2Q9UIG4 136 aa15.8■□□□□ 0.12
CLK2-201ENST00000355560 FAT2Q9NYQ8 4349 aa15.8■□□□□ 0.12
CLK2-201ENST00000355560 Q6ZVQ6 151 aa15.79■□□□□ 0.12
CLK2-201ENST00000355560 SRRM2Q9UQ35 2752 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 268.9 ms