RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TRBV7-4A0A0J9YYF1 115 aa10.16□□□□□ -0.78
BRAT1-201ENST00000340611 NREPQ16612 68 aa10.16□□□□□ -0.78
BRAT1-201ENST00000340611 TMEM256-PLSCR3K7ERE1 68 aa10.15□□□□□ -0.78
BRAT1-201ENST00000340611 Q8N814 137 aa10.15□□□□□ -0.78
BRAT1-201ENST00000340611 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
BRAT1-201ENST00000340611 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
BRAT1-201ENST00000340611 PRR15Q8IV56 129 aa10.14□□□□□ -0.79
BRAT1-201ENST00000340611 ATP5EP56381 51 aaPredicted RBP10.13□□□□□ -0.79
BRAT1-201ENST00000340611 Q8N9L7 120 aa10.13□□□□□ -0.79
BRAT1-201ENST00000340611 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
BRAT1-201ENST00000340611 LINC00959A0A1B0GUT2 108 aa10.12□□□□□ -0.79
BRAT1-201ENST00000340611 A8MU10 97 aa10.12□□□□□ -0.79
BRAT1-201ENST00000340611 WFDC10BQ8IUB3 73 aa10.11□□□□□ -0.79
BRAT1-201ENST00000340611 Q6ZQT0 140 aa10.1□□□□□ -0.79
BRAT1-201ENST00000340611 IGLV10-54A0A075B6I4 117 aa10.1□□□□□ -0.79
BRAT1-201ENST00000340611 CD164Q04900 197 aa10.1□□□□□ -0.79
BRAT1-201ENST00000340611 BPY2O14599 106 aa10.1□□□□□ -0.79
BRAT1-201ENST00000340611 BCE1O60756 84 aa10.1□□□□□ -0.79
BRAT1-201ENST00000340611 HIGD2AQ9BW72 106 aa10.1□□□□□ -0.79
BRAT1-201ENST00000340611 DNAH7Q8WXX0 4024 aa10.09□□□□□ -0.79
BRAT1-201ENST00000340611 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
BRAT1-201ENST00000340611 Q6ZRU5 148 aa10.09□□□□□ -0.79
BRAT1-201ENST00000340611 PRYO14603 147 aa10.08□□□□□ -0.8
BRAT1-201ENST00000340611 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
BRAT1-201ENST00000340611 C9orf116Q5BN46 136 aaPredicted RBP10.07□□□□□ -0.8
BRAT1-201ENST00000340611 LELP1Q5T871 98 aa10.06□□□□□ -0.8
BRAT1-201ENST00000340611 MRPL55Q7Z7F7 128 aaKnown RBP10.06□□□□□ -0.8
BRAT1-201ENST00000340611 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
BRAT1-201ENST00000340611 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
BRAT1-201ENST00000340611 Q6ZRP5 223 aa10.05□□□□□ -0.8
BRAT1-201ENST00000340611 PRR4Q16378 134 aa10.05□□□□□ -0.8
BRAT1-201ENST00000340611 C6orf99Q4VX62 202 aa10.05□□□□□ -0.8
BRAT1-201ENST00000340611 LINC00167Q96N53 147 aa10.04□□□□□ -0.8
BRAT1-201ENST00000340611 STARD9Q9P2P6 4700 aa10.04□□□□□ -0.8
BRAT1-201ENST00000340611 Q8NDZ9 215 aa10.04□□□□□ -0.8
BRAT1-201ENST00000340611 PLECQ15149 4684 aaKnown RBP10.03□□□□□ -0.8
BRAT1-201ENST00000340611 Q8IZM0 81 aa10.03□□□□□ -0.8
BRAT1-201ENST00000340611 H3BNG1 76 aa10.02□□□□□ -0.81
BRAT1-201ENST00000340611 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
BRAT1-201ENST00000340611 REG3AQ06141 175 aa10.01□□□□□ -0.81
BRAT1-201ENST00000340611 LINC00588Q9Y4M8 146 aa10.01□□□□□ -0.81
BRAT1-201ENST00000340611 CXCL6P80162 114 aa10□□□□□ -0.81
BRAT1-201ENST00000340611 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10□□□□□ -0.81
BRAT1-201ENST00000340611 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
BRAT1-201ENST00000340611 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
BRAT1-201ENST00000340611 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
BRAT1-201ENST00000340611 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
BRAT1-201ENST00000340611 SPTSSBQ8NFR3 76 aa9.97□□□□□ -0.81
BRAT1-201ENST00000340611 TRAV22A0A0B4J277 110 aa9.97□□□□□ -0.81
BRAT1-201ENST00000340611 hDV103S1A0JD37 113 aa9.97□□□□□ -0.81
BRAT1-201ENST00000340611 A8MUN3 132 aa9.97□□□□□ -0.81
BRAT1-201ENST00000340611 ZNF561-AS1K7EIQ3 104 aa9.97□□□□□ -0.81
BRAT1-201ENST00000340611 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
BRAT1-201ENST00000340611 Q6ZQY7 126 aa9.96□□□□□ -0.81
BRAT1-201ENST00000340611 LINC00575Q6W349 94 aa9.96□□□□□ -0.81
BRAT1-201ENST00000340611 FAM30AQ9NZY2 134 aa9.96□□□□□ -0.81
BRAT1-201ENST00000340611 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
BRAT1-201ENST00000340611 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
BRAT1-201ENST00000340611 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
BRAT1-201ENST00000340611 C10orf25Q5T742 122 aa9.94□□□□□ -0.82
BRAT1-201ENST00000340611 DNAH1Q9P2D7 4330 aa9.93□□□□□ -0.82
BRAT1-201ENST00000340611 Q1T7F1 81 aa9.92□□□□□ -0.82
BRAT1-201ENST00000340611 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
BRAT1-201ENST00000340611 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
BRAT1-201ENST00000340611 OCR1Q9BZK8 76 aa9.92□□□□□ -0.82
BRAT1-201ENST00000340611 APLNQ9ULZ1 77 aa9.92□□□□□ -0.82
BRAT1-201ENST00000340611 DYNC2H1Q8NCM8 4307 aaKnown RBP9.92□□□□□ -0.82
BRAT1-201ENST00000340611 PRR34Q9NV39 138 aa9.91□□□□□ -0.82
BRAT1-201ENST00000340611 COX17Q14061 63 aa9.9□□□□□ -0.82
BRAT1-201ENST00000340611 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
BRAT1-201ENST00000340611 LINC01556Q5JQF7 62 aa9.89□□□□□ -0.83
BRAT1-201ENST00000340611 IGKV2D-24A0A075B6R9 120 aa9.88□□□□□ -0.83
BRAT1-201ENST00000340611 ERC2-IT1O76042 136 aa9.88□□□□□ -0.83
BRAT1-201ENST00000340611 UBE2DNLQ8IWF7 75 aa9.88□□□□□ -0.83
BRAT1-201ENST00000340611 KRTAP1-5Q9BYS1 174 aa9.88□□□□□ -0.83
BRAT1-201ENST00000340611 IGKV4-1P06312 121 aa9.87□□□□□ -0.83
BRAT1-201ENST00000340611 CASC10Q5T4H9 136 aa9.87□□□□□ -0.83
BRAT1-201ENST00000340611 SPAG11BQ08648 103 aa9.86□□□□□ -0.83
BRAT1-201ENST00000340611 DNAH10OSP0CZ25 163 aa9.86□□□□□ -0.83
BRAT1-201ENST00000340611 C3orf84H3BNL1 204 aa9.86□□□□□ -0.83
BRAT1-201ENST00000340611 HIGD2BQ4VC39 106 aa9.86□□□□□ -0.83
BRAT1-201ENST00000340611 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
BRAT1-201ENST00000340611 XAGE1AQ9HD64 81 aa9.86□□□□□ -0.83
BRAT1-201ENST00000340611 CHKB-CPT1BH3BT56 60 aa9.85□□□□□ -0.83
BRAT1-201ENST00000340611 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
BRAT1-201ENST00000340611 SMIM29Q86T20 159 aa9.84□□□□□ -0.83
BRAT1-201ENST00000340611 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
BRAT1-201ENST00000340611 NUPR2A6NF83 97 aa9.83□□□□□ -0.84
BRAT1-201ENST00000340611 IGLV6-57P01721 117 aa9.83□□□□□ -0.84
BRAT1-201ENST00000340611 M0R378 163 aa9.82□□□□□ -0.84
BRAT1-201ENST00000340611 PDE6GP18545 87 aa9.82□□□□□ -0.84
BRAT1-201ENST00000340611 C16orf90A8MZG2 172 aa9.8□□□□□ -0.84
BRAT1-201ENST00000340611 UBE2BP63146 152 aa9.8□□□□□ -0.84
BRAT1-201ENST00000340611 PSCAO43653 123 aa9.8□□□□□ -0.84
BRAT1-201ENST00000340611 Q5VV11 94 aa9.79□□□□□ -0.84
BRAT1-201ENST00000340611 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
BRAT1-201ENST00000340611 C15orf56Q8N910 161 aa9.77□□□□□ -0.84
BRAT1-201ENST00000340611 VPS13DQ5THJ4 4388 aa9.77□□□□□ -0.85
BRAT1-201ENST00000340611 HCG22E2RYF7 251 aa9.76□□□□□ -0.85
BRAT1-201ENST00000340611 ZNF73O43830 326 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms