RNA–Protein interactions for RNA: ENST00000335464.9

TMEM104-201, Transcript of transmembrane protein 104, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM104, Length 4,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-201ENST00000335464 KRTAP10-3P60369 221 aa9.43□□□□□ -0.9
TMEM104-201ENST00000335464 FLNBO75369 2602 aaKnown RBP9.42□□□□□ -0.9
TMEM104-201ENST00000335464 SERTAD4-AS1Q5TG53 156 aa9.41□□□□□ -0.9
TMEM104-201ENST00000335464 H0Y9P7 68 aa9.41□□□□□ -0.9
TMEM104-201ENST00000335464 CHD6Q8TD26 2715 aa9.41□□□□□ -0.9
TMEM104-201ENST00000335464 ITPR3Q14573 2671 aa9.41□□□□□ -0.9
TMEM104-201ENST00000335464 C15orf56Q8N910 161 aa9.4□□□□□ -0.9
TMEM104-201ENST00000335464 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.91
TMEM104-201ENST00000335464 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.91
TMEM104-201ENST00000335464 A6NED7 52 aa9.39□□□□□ -0.91
TMEM104-201ENST00000335464 Q8NDZ9 215 aa9.39□□□□□ -0.91
TMEM104-201ENST00000335464 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
TMEM104-201ENST00000335464 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
TMEM104-201ENST00000335464 DMXL1Q9Y485 3027 aa9.38□□□□□ -0.91
TMEM104-201ENST00000335464 PRR15LQ9BU68 103 aa9.38□□□□□ -0.91
TMEM104-201ENST00000335464 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
TMEM104-201ENST00000335464 CR1P17927 2039 aa9.37□□□□□ -0.91
TMEM104-201ENST00000335464 Q8N377 158 aa9.37□□□□□ -0.91
TMEM104-201ENST00000335464 F8P00451 2351 aa9.37□□□□□ -0.91
TMEM104-201ENST00000335464 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
TMEM104-201ENST00000335464 K7EQZ3 153 aa9.35□□□□□ -0.91
TMEM104-201ENST00000335464 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
TMEM104-201ENST00000335464 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
TMEM104-201ENST00000335464 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
TMEM104-201ENST00000335464 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
TMEM104-201ENST00000335464 PMAIP1Q13794 54 aa9.33□□□□□ -0.92
TMEM104-201ENST00000335464 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
TMEM104-201ENST00000335464 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
TMEM104-201ENST00000335464 DMDP11532 3685 aa9.31□□□□□ -0.92
TMEM104-201ENST00000335464 ZFHX4Q86UP3 3567 aa9.31□□□□□ -0.92
TMEM104-201ENST00000335464 HRNRQ86YZ3 2850 aaPredicted RBP9.31□□□□□ -0.92
TMEM104-201ENST00000335464 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
TMEM104-201ENST00000335464 LINC00588Q9Y4M8 146 aa9.3□□□□□ -0.92
TMEM104-201ENST00000335464 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
TMEM104-201ENST00000335464 Q5XG85 94 aa9.29□□□□□ -0.92
TMEM104-201ENST00000335464 RPL37AP61513 92 aaKnown RBP9.29□□□□□ -0.92
TMEM104-201ENST00000335464 IGHV6-1A0A0B4J1U7 121 aa9.28□□□□□ -0.92
TMEM104-201ENST00000335464 TEX15Q9BXT5 2789 aa9.28□□□□□ -0.92
TMEM104-201ENST00000335464 A0A1W2PNM2 257 aa9.27□□□□□ -0.92
TMEM104-201ENST00000335464 COL12A1Q99715 3063 aa9.27□□□□□ -0.92
TMEM104-201ENST00000335464 HECTD1Q9ULT8 2610 aa9.27□□□□□ -0.93
TMEM104-201ENST00000335464 OXTP01178 125 aa9.27□□□□□ -0.93
TMEM104-201ENST00000335464 DCHS1Q96JQ0 3298 aa9.27□□□□□ -0.93
TMEM104-201ENST00000335464 CFAP46Q8IYW2 2715 aa9.26□□□□□ -0.93
TMEM104-201ENST00000335464 ATRQ13535 2644 aa9.26□□□□□ -0.93
TMEM104-201ENST00000335464 FLNCQ14315 2725 aa9.26□□□□□ -0.93
TMEM104-201ENST00000335464 OCR1Q9BZK8 76 aa9.25□□□□□ -0.93
TMEM104-201ENST00000335464 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
TMEM104-201ENST00000335464 WIPF1O43516 503 aa9.24□□□□□ -0.93
TMEM104-201ENST00000335464 A0A0G2JQZ4 141 aa9.24□□□□□ -0.93
TMEM104-201ENST00000335464 A0A1W2PNN7 141 aa9.24□□□□□ -0.93
TMEM104-201ENST00000335464 IGLV5-48A0A075B6I7 105 aa9.24□□□□□ -0.93
TMEM104-201ENST00000335464 LIMD2Q9BT23 127 aa9.24□□□□□ -0.93
TMEM104-201ENST00000335464 IGSF10Q6WRI0 2623 aa9.23□□□□□ -0.93
TMEM104-201ENST00000335464 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
TMEM104-201ENST00000335464 IGFL1Q6UW32 110 aa9.23□□□□□ -0.93
TMEM104-201ENST00000335464 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
TMEM104-201ENST00000335464 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
TMEM104-201ENST00000335464 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
TMEM104-201ENST00000335464 EPM2AB3EWF7 344 aa9.22□□□□□ -0.93
TMEM104-201ENST00000335464 PLA2G2DQ9UNK4 145 aa9.22□□□□□ -0.93
TMEM104-201ENST00000335464 USP24Q9UPU5 2620 aa9.21□□□□□ -0.93
TMEM104-201ENST00000335464 H3BPC8 53 aa9.21□□□□□ -0.93
TMEM104-201ENST00000335464 ITPR1Q14643 2758 aa9.2□□□□□ -0.94
TMEM104-201ENST00000335464 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
TMEM104-201ENST00000335464 TRAV22A0A0B4J277 110 aa9.18□□□□□ -0.94
TMEM104-201ENST00000335464 A8MUN3 132 aa9.18□□□□□ -0.94
TMEM104-201ENST00000335464 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
TMEM104-201ENST00000335464 CASC10Q5T4H9 136 aa9.18□□□□□ -0.94
TMEM104-201ENST00000335464 A8MWP4 228 aa9.16□□□□□ -0.94
TMEM104-201ENST00000335464 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
TMEM104-201ENST00000335464 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
TMEM104-201ENST00000335464 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
TMEM104-201ENST00000335464 TP53AIP1Q9HCN2 124 aa9.14□□□□□ -0.95
TMEM104-201ENST00000335464 SEC61GP60059 68 aa9.14□□□□□ -0.95
TMEM104-201ENST00000335464 SMG1Q96Q15 3661 aaKnown RBP9.14□□□□□ -0.95
TMEM104-201ENST00000335464 MUC3AQ02505 3323 aa9.14□□□□□ -0.95
TMEM104-201ENST00000335464 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
TMEM104-201ENST00000335464 LAMA5O15230 3695 aa9.13□□□□□ -0.95
TMEM104-201ENST00000335464 DSCR10P59022 87 aa9.13□□□□□ -0.95
TMEM104-201ENST00000335464 UNC79Q9P2D8 2635 aa9.12□□□□□ -0.95
TMEM104-201ENST00000335464 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
TMEM104-201ENST00000335464 IGLV5-37A0A075B6J1 123 aa9.12□□□□□ -0.95
TMEM104-201ENST00000335464 ZANQ9Y493 2812 aa9.11□□□□□ -0.95
TMEM104-201ENST00000335464 FAM229BQ4G0N7 80 aa9.11□□□□□ -0.95
TMEM104-201ENST00000335464 SETXQ7Z333 2677 aaKnown RBP9.11□□□□□ -0.95
TMEM104-201ENST00000335464 SPAG11AQ6PDA7 123 aa9.1□□□□□ -0.95
TMEM104-201ENST00000335464 SPRR4Q96PI1 79 aa9.1□□□□□ -0.95
TMEM104-201ENST00000335464 NUPR2A6NF83 97 aa9.09□□□□□ -0.95
TMEM104-201ENST00000335464 MOBPQ13875 183 aa9.09□□□□□ -0.95
TMEM104-201ENST00000335464 MAST4O15021 2626 aa9.08□□□□□ -0.96
TMEM104-201ENST00000335464 RELNP78509 3460 aa9.08□□□□□ -0.96
TMEM104-201ENST00000335464 COA5Q86WW8 74 aa9.07□□□□□ -0.96
TMEM104-201ENST00000335464 MGAM2Q2M2H8 2515 aa9.07□□□□□ -0.96
TMEM104-201ENST00000335464 UTP20O75691 2785 aaKnown RBP9.06□□□□□ -0.96
TMEM104-201ENST00000335464 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
TMEM104-201ENST00000335464 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
TMEM104-201ENST00000335464 ASH1LQ9NR48 2969 aaKnown RBP9.05□□□□□ -0.96
TMEM104-201ENST00000335464 DCHS2Q6V1P9 2916 aa9.05□□□□□ -0.96
TMEM104-201ENST00000335464 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms