RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 COL7A1Q02388 2944 aa7.19□□□□□ -1.26
MSH3-201ENST00000265081 VPS13DQ5THJ4 4388 aa7.19□□□□□ -1.26
MSH3-201ENST00000265081 M0R2N4 97 aa7.18□□□□□ -1.26
MSH3-201ENST00000265081 ATOX1O00244 68 aa7.18□□□□□ -1.26
MSH3-201ENST00000265081 C3orf22Q8N5N4 141 aa7.18□□□□□ -1.26
MSH3-201ENST00000265081 B5MCH6 92 aa7.17□□□□□ -1.26
MSH3-201ENST00000265081 CNBPP62633 177 aaKnown RBP7.17□□□□□ -1.26
MSH3-201ENST00000265081 UQCRQO14949 82 aa7.17□□□□□ -1.26
MSH3-201ENST00000265081 IGLV5-48A0A075B6I7 105 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 BCE1O60756 84 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 CXCL6P80162 114 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 STAB1Q9NY15 2570 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 COX7CP15954 63 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 TNP2Q05952 138 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 Q6ZRX8 168 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 DSCR8Q96T75 97 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 KRTAP1-5Q9BYS1 174 aa7.16□□□□□ -1.26
MSH3-201ENST00000265081 DNAH6Q9C0G6 4158 aa7.15□□□□□ -1.26
MSH3-201ENST00000265081 IGKV3D-7A0A0C4DH55 119 aa7.15□□□□□ -1.26
MSH3-201ENST00000265081 PRB2P02812 416 aaPredicted RBP7.15□□□□□ -1.26
MSH3-201ENST00000265081 CRYGAP11844 174 aa7.15□□□□□ -1.26
MSH3-201ENST00000265081 FLNBO75369 2602 aaKnown RBP7.15□□□□□ -1.27
MSH3-201ENST00000265081 Q9BRP9 147 aa7.15□□□□□ -1.27
MSH3-201ENST00000265081 UBL5Q9BZL1 73 aa7.15□□□□□ -1.27
MSH3-201ENST00000265081 LAMTOR3Q9UHA4 124 aa7.15□□□□□ -1.27
MSH3-201ENST00000265081 DHRS4-AS1Q9P1J3 65 aa7.14□□□□□ -1.27
MSH3-201ENST00000265081 LOC107984640A0A0U1RRK4 108 aa7.14□□□□□ -1.27
MSH3-201ENST00000265081 Q6ZVQ6 151 aa7.14□□□□□ -1.27
MSH3-201ENST00000265081 Q8N377 158 aa7.13□□□□□ -1.27
MSH3-201ENST00000265081 NKAPP1Q8N9T2 125 aa7.13□□□□□ -1.27
MSH3-201ENST00000265081 A0A1B0GW54 56 aa7.13□□□□□ -1.27
MSH3-201ENST00000265081 FAM168BA1KXE4 195 aa7.13□□□□□ -1.27
MSH3-201ENST00000265081 HECTD4Q9Y4D8 3996 aa7.13□□□□□ -1.27
MSH3-201ENST00000265081 B9D2Q9BPU9 175 aa7.12□□□□□ -1.27
MSH3-201ENST00000265081 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
MSH3-201ENST00000265081 A0A087WVE0 104 aa7.12□□□□□ -1.27
MSH3-201ENST00000265081 MRPL55Q7Z7F7 128 aaKnown RBP7.11□□□□□ -1.27
MSH3-201ENST00000265081 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
MSH3-201ENST00000265081 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
MSH3-201ENST00000265081 EPM2AB3EWF7 344 aa7.09□□□□□ -1.27
MSH3-201ENST00000265081 FAM19A1Q7Z5A9 133 aa7.09□□□□□ -1.27
MSH3-201ENST00000265081 NBEAL1Q6ZS30 2694 aa7.09□□□□□ -1.27
MSH3-201ENST00000265081 SS18L2Q9UHA2 77 aa7.07□□□□□ -1.28
MSH3-201ENST00000265081 Q6ZRN7 208 aaPredicted RBP7.06□□□□□ -1.28
MSH3-201ENST00000265081 DNAH2Q9P225 4427 aa7.06□□□□□ -1.28
MSH3-201ENST00000265081 LRCOL1A6NCL2 159 aa7.06□□□□□ -1.28
MSH3-201ENST00000265081 SPRR4Q96PI1 79 aa7.06□□□□□ -1.28
MSH3-201ENST00000265081 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
MSH3-201ENST00000265081 A0A096LNI7 61 aa7.05□□□□□ -1.28
MSH3-201ENST00000265081 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
MSH3-201ENST00000265081 MDFIQ99750 246 aa7.05□□□□□ -1.28
MSH3-201ENST00000265081 IGLV8-61A0A075B6I0 122 aa7.05□□□□□ -1.28
MSH3-201ENST00000265081 REG3GQ6UW15 175 aa7.05□□□□□ -1.28
MSH3-201ENST00000265081 RPL37AP8A6NKH3 93 aa7.04□□□□□ -1.28
MSH3-201ENST00000265081 C9orf153Q5TBE3 101 aa7.04□□□□□ -1.28
MSH3-201ENST00000265081 H0Y9J4 135 aa7.04□□□□□ -1.28
MSH3-201ENST00000265081 C14orf177Q52M58 125 aa7.04□□□□□ -1.28
MSH3-201ENST00000265081 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
MSH3-201ENST00000265081 ERC2-IT1O76042 136 aa7.03□□□□□ -1.28
MSH3-201ENST00000265081 FRAS1Q86XX4 4008 aa7.02□□□□□ -1.29
MSH3-201ENST00000265081 ETDCA0A1B0GVM5 59 aa7.02□□□□□ -1.29
MSH3-201ENST00000265081 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
MSH3-201ENST00000265081 FAM19A5Q7Z5A7 132 aaPredicted RBP7.02□□□□□ -1.29
MSH3-201ENST00000265081 A0A1W2PNM2 257 aa7.02□□□□□ -1.29
MSH3-201ENST00000265081 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
MSH3-201ENST00000265081 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
MSH3-201ENST00000265081 NUPR2A6NF83 97 aa7.01□□□□□ -1.29
MSH3-201ENST00000265081 IGKV4-1P06312 121 aa7.01□□□□□ -1.29
MSH3-201ENST00000265081 SPRR1BP22528 89 aa7□□□□□ -1.29
MSH3-201ENST00000265081 TRAV7A0A075B6U4 112 aa7□□□□□ -1.29
MSH3-201ENST00000265081 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
MSH3-201ENST00000265081 Q8NBF4 154 aa7□□□□□ -1.29
MSH3-201ENST00000265081 PKIGQ9Y2B9 76 aa7□□□□□ -1.29
MSH3-201ENST00000265081 NBDYA0A0U1RRE5 68 aa6.99□□□□□ -1.29
MSH3-201ENST00000265081 NOTCH1P46531 2555 aa6.99□□□□□ -1.29
MSH3-201ENST00000265081 COL6A5A8TX70 2615 aa6.98□□□□□ -1.29
MSH3-201ENST00000265081 DNAH8Q96JB1 4490 aa6.98□□□□□ -1.29
MSH3-201ENST00000265081 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
MSH3-201ENST00000265081 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
MSH3-201ENST00000265081 HAMPP81172 84 aa6.97□□□□□ -1.29
MSH3-201ENST00000265081 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
MSH3-201ENST00000265081 TMEM258P61165 79 aa6.97□□□□□ -1.29
MSH3-201ENST00000265081 C1orf137Q5JT78 98 aa6.97□□□□□ -1.29
MSH3-201ENST00000265081 KLKP1Q107X0 134 aa6.96□□□□□ -1.29
MSH3-201ENST00000265081 RPS28P62857 69 aaKnown RBP6.96□□□□□ -1.3
MSH3-201ENST00000265081 UBE2DNLQ8IWF7 75 aa6.95□□□□□ -1.3
MSH3-201ENST00000265081 DEFB105AQ8NG35 78 aa6.95□□□□□ -1.3
MSH3-201ENST00000265081 ALMS1Q8TCU4 4167 aa6.94□□□□□ -1.3
MSH3-201ENST00000265081 FUSP35637 526 aaKnown RBP eCLIP6.94□□□□□ -1.3
MSH3-201ENST00000265081 NREPQ16612 68 aa6.94□□□□□ -1.3
MSH3-201ENST00000265081 LINC00474Q9P2X8 69 aa6.94□□□□□ -1.3
MSH3-201ENST00000265081 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
MSH3-201ENST00000265081 LCE6AA0A183 80 aa6.93□□□□□ -1.3
MSH3-201ENST00000265081 PSCAO43653 123 aa6.93□□□□□ -1.3
MSH3-201ENST00000265081 LINC00476Q8WZB0 136 aa6.93□□□□□ -1.3
MSH3-201ENST00000265081 UBE2BP63146 152 aa6.92□□□□□ -1.3
MSH3-201ENST00000265081 SPACA4Q8TDM5 124 aa6.92□□□□□ -1.3
MSH3-201ENST00000265081 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
MSH3-201ENST00000265081 IGFL1Q6UW32 110 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 1017 ms