RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PRKDCP78527 4128 aaKnown RBP14.93□□□□□ -0.02
MSX2-201ENST00000239243 LINC00643Q86TS7 51 aa14.93□□□□□ -0.02
MSX2-201ENST00000239243 RBM3P98179 157 aaKnown RBP14.92□□□□□ -0.02
MSX2-201ENST00000239243 KRTAP7-1Q8IUC3 87 aa14.92□□□□□ -0.02
MSX2-201ENST00000239243 Q6Q795 121 aa14.91□□□□□ -0.02
MSX2-201ENST00000239243 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.9□□□□□ -0.02
MSX2-201ENST00000239243 RPL37AP8A6NKH3 93 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 MEGF8Q7Z7M0 2845 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 PLECQ15149 4684 aaKnown RBP14.9□□□□□ -0.02
MSX2-201ENST00000239243 A0A096LNI7 61 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 LRCOL1A6NCL2 159 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 SPRR1AP35321 89 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 Q6ZRN7 208 aaPredicted RBP14.89□□□□□ -0.03
MSX2-201ENST00000239243 SMCR5Q8TEV8 140 aa14.89□□□□□ -0.03
MSX2-201ENST00000239243 DHRS4-AS1Q9P1J3 65 aa14.88□□□□□ -0.03
MSX2-201ENST00000239243 DNAH7Q8WXX0 4024 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 ETDCA0A1B0GVM5 59 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 Q6ZRX8 168 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 DNHD1Q96M86 4753 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 LOC110117498A0A087WWA1 95 aa14.86□□□□□ -0.03
MSX2-201ENST00000239243 KRTAP4-16G5E9R7 235 aaPredicted RBP14.86□□□□□ -0.03
MSX2-201ENST00000239243 PDE6GP18545 87 aa14.86□□□□□ -0.03
MSX2-201ENST00000239243 IGKV2-24A0A0C4DH68 120 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 DSCR8Q96T75 97 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 TRBV7-7A0A0K0K1E9 115 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 B5MCH6 92 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 C9orf163Q8N9P6 203 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 TENM2Q9NT68 2774 aa14.84□□□□□ -0.03
MSX2-201ENST00000239243 DNAH10Q8IVF4 4471 aa14.84□□□□□ -0.03
MSX2-201ENST00000239243 IMUPQ9GZP8 106 aa14.83□□□□□ -0.04
MSX2-201ENST00000239243 LINC00846Q9NV44 126 aa14.82□□□□□ -0.04
MSX2-201ENST00000239243 Q6ZQT0 140 aa14.82□□□□□ -0.04
MSX2-201ENST00000239243 NDUFV3P56181 108 aaKnown RBP14.81□□□□□ -0.04
MSX2-201ENST00000239243 M0R2N4 97 aa14.81□□□□□ -0.04
MSX2-201ENST00000239243 REG3GQ6UW15 175 aa14.81□□□□□ -0.04
MSX2-201ENST00000239243 STARD9Q9P2P6 4700 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 A0A1W2PNN7 141 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 LINC00474Q9P2X8 69 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 VPS13DQ5THJ4 4388 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 Q9BRP9 147 aa14.76□□□□□ -0.05
MSX2-201ENST00000239243 TRBV7-4A0A0J9YYF1 115 aa14.74□□□□□ -0.05
MSX2-201ENST00000239243 Q6ZR54 194 aa14.74□□□□□ -0.05
MSX2-201ENST00000239243 Q6JHZ5 121 aa14.74□□□□□ -0.05
MSX2-201ENST00000239243 A0A087WTM6 91 aa14.72□□□□□ -0.05
MSX2-201ENST00000239243 CHTF8P0CG12 524 aa14.72□□□□□ -0.05
MSX2-201ENST00000239243 UBE2BP63146 152 aa14.72□□□□□ -0.05
MSX2-201ENST00000239243 UBL5Q9BZL1 73 aa14.71□□□□□ -0.05
MSX2-201ENST00000239243 Q8N377 158 aa14.7□□□□□ -0.06
MSX2-201ENST00000239243 DEFB105AQ8NG35 78 aa14.7□□□□□ -0.06
MSX2-201ENST00000239243 IGLV5-48A0A075B6I7 105 aa14.68□□□□□ -0.06
MSX2-201ENST00000239243 LINC01547P58512 204 aaPredicted RBP14.68□□□□□ -0.06
MSX2-201ENST00000239243 ATP5EP2Q5VTU8 51 aa14.67□□□□□ -0.06
MSX2-201ENST00000239243 ANAPC13Q9BS18 74 aa14.65□□□□□ -0.06
MSX2-201ENST00000239243 FAM19A1Q7Z5A9 133 aa14.65□□□□□ -0.06
MSX2-201ENST00000239243 PHF5AQ7RTV0 110 aaKnown RBP14.64□□□□□ -0.07
MSX2-201ENST00000239243 WWC2-AS2Q96NR7 200 aa14.64□□□□□ -0.07
MSX2-201ENST00000239243 C1orf134Q5TEV5 83 aa14.62□□□□□ -0.07
MSX2-201ENST00000239243 IGKV3D-7A0A0C4DH55 119 aa14.62□□□□□ -0.07
MSX2-201ENST00000239243 ERC2-IT1O76042 136 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 ST20-AS1Q8NBB2 130 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 FBN3Q75N90 2809 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 LY6G6CO95867 125 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 SPACA4Q8TDM5 124 aa14.59□□□□□ -0.07
MSX2-201ENST00000239243 DPH3Q96FX2 82 aa14.59□□□□□ -0.07
MSX2-201ENST00000239243 FAM236AA0A1B0GUQ0 79 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 FAM236BA0A1B0GV22 79 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 H0Y9J4 135 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 PRLHP81277 87 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 RTL8CO15255 209 aa14.58□□□□□ -0.08
MSX2-201ENST00000239243 Q6ZVQ6 151 aa14.56□□□□□ -0.08
MSX2-201ENST00000239243 LINC00476Q8WZB0 136 aa14.56□□□□□ -0.08
MSX2-201ENST00000239243 PANO1I0J062 215 aa14.55□□□□□ -0.08
MSX2-201ENST00000239243 TNP2Q05952 138 aa14.55□□□□□ -0.08
MSX2-201ENST00000239243 EPM2AB3EWF7 344 aa14.54□□□□□ -0.08
MSX2-201ENST00000239243 C3orf22Q8N5N4 141 aa14.54□□□□□ -0.08
MSX2-201ENST00000239243 HIGD2AQ9BW72 106 aa14.54□□□□□ -0.08
MSX2-201ENST00000239243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.53□□□□□ -0.08
MSX2-201ENST00000239243 KRTAP11-1Q8IUC1 163 aa14.53□□□□□ -0.08
MSX2-201ENST00000239243 A0A1B0GW54 56 aa14.51□□□□□ -0.09
MSX2-201ENST00000239243 F8WEM9 126 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 FUSP35637 526 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSX2-201ENST00000239243 UBE2AP49459 152 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 C1orf137Q5JT78 98 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 IGLV5-52A0A0A0MRZ9 124 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 BCE1O60756 84 aa14.48□□□□□ -0.09
MSX2-201ENST00000239243 HIST1H4AP62805 103 aaKnown RBP14.48□□□□□ -0.09
MSX2-201ENST00000239243 HAMPP81172 84 aa14.47□□□□□ -0.09
MSX2-201ENST00000239243 CXCL6P80162 114 aa14.47□□□□□ -0.09
MSX2-201ENST00000239243 SMIM29Q86T20 159 aa14.47□□□□□ -0.09
MSX2-201ENST00000239243 C3orf84H3BNL1 204 aa14.46□□□□□ -0.09
MSX2-201ENST00000239243 KMT2AQ03164 3969 aa14.45□□□□□ -0.1
MSX2-201ENST00000239243 DNAH2Q9P225 4427 aa14.43□□□□□ -0.1
MSX2-201ENST00000239243 A0A087WVE0 104 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 ATOX1O00244 68 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 Q8NBF4 154 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 SVIPQ8NHG7 77 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 PLAC8Q9NZF1 115 aa14.41□□□□□ -0.1
MSX2-201ENST00000239243 DNAH6Q9C0G6 4158 aa14.41□□□□□ -0.1
MSX2-201ENST00000239243 SPRR1BP22528 89 aa14.41□□□□□ -0.1
MSX2-201ENST00000239243 A0A1W2PNM2 257 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms