RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PRKDCP78527 4128 aaKnown RBP14.93□□□□□ -0.02
MSX2-201ENST00000239243 LINC00643Q86TS7 51 aa14.93□□□□□ -0.02
MSX2-201ENST00000239243 RBM3P98179 157 aaKnown RBP14.92□□□□□ -0.02
MSX2-201ENST00000239243 KRTAP7-1Q8IUC3 87 aa14.92□□□□□ -0.02
MSX2-201ENST00000239243 Q6Q795 121 aa14.91□□□□□ -0.02
MSX2-201ENST00000239243 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.9□□□□□ -0.02
MSX2-201ENST00000239243 RPL37AP8A6NKH3 93 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 MEGF8Q7Z7M0 2845 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 PLECQ15149 4684 aaKnown RBP14.9□□□□□ -0.02
MSX2-201ENST00000239243 A0A096LNI7 61 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 LRCOL1A6NCL2 159 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 SPRR1AP35321 89 aa14.9□□□□□ -0.02
MSX2-201ENST00000239243 Q6ZRN7 208 aaPredicted RBP14.89□□□□□ -0.03
MSX2-201ENST00000239243 SMCR5Q8TEV8 140 aa14.89□□□□□ -0.03
MSX2-201ENST00000239243 DHRS4-AS1Q9P1J3 65 aa14.88□□□□□ -0.03
MSX2-201ENST00000239243 DNAH7Q8WXX0 4024 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 ETDCA0A1B0GVM5 59 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 Q6ZRX8 168 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 DNHD1Q96M86 4753 aa14.87□□□□□ -0.03
MSX2-201ENST00000239243 LOC110117498A0A087WWA1 95 aa14.86□□□□□ -0.03
MSX2-201ENST00000239243 KRTAP4-16G5E9R7 235 aaPredicted RBP14.86□□□□□ -0.03
MSX2-201ENST00000239243 PDE6GP18545 87 aa14.86□□□□□ -0.03
MSX2-201ENST00000239243 IGKV2-24A0A0C4DH68 120 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 DSCR8Q96T75 97 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 TRBV7-7A0A0K0K1E9 115 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 B5MCH6 92 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 C9orf163Q8N9P6 203 aa14.85□□□□□ -0.03
MSX2-201ENST00000239243 TENM2Q9NT68 2774 aa14.84□□□□□ -0.03
MSX2-201ENST00000239243 DNAH10Q8IVF4 4471 aa14.84□□□□□ -0.03
MSX2-201ENST00000239243 IMUPQ9GZP8 106 aa14.83□□□□□ -0.04
MSX2-201ENST00000239243 LINC00846Q9NV44 126 aa14.82□□□□□ -0.04
MSX2-201ENST00000239243 Q6ZQT0 140 aa14.82□□□□□ -0.04
MSX2-201ENST00000239243 NDUFV3P56181 108 aaKnown RBP14.81□□□□□ -0.04
MSX2-201ENST00000239243 M0R2N4 97 aa14.81□□□□□ -0.04
MSX2-201ENST00000239243 REG3GQ6UW15 175 aa14.81□□□□□ -0.04
MSX2-201ENST00000239243 STARD9Q9P2P6 4700 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 A0A1W2PNN7 141 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 LINC00474Q9P2X8 69 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 VPS13DQ5THJ4 4388 aa14.78□□□□□ -0.04
MSX2-201ENST00000239243 Q9BRP9 147 aa14.76□□□□□ -0.05
MSX2-201ENST00000239243 TRBV7-4A0A0J9YYF1 115 aa14.74□□□□□ -0.05
MSX2-201ENST00000239243 Q6ZR54 194 aa14.74□□□□□ -0.05
MSX2-201ENST00000239243 Q6JHZ5 121 aa14.74□□□□□ -0.05
MSX2-201ENST00000239243 A0A087WTM6 91 aa14.72□□□□□ -0.05
MSX2-201ENST00000239243 CHTF8P0CG12 524 aa14.72□□□□□ -0.05
MSX2-201ENST00000239243 UBE2BP63146 152 aa14.72□□□□□ -0.05
MSX2-201ENST00000239243 UBL5Q9BZL1 73 aa14.71□□□□□ -0.05
MSX2-201ENST00000239243 Q8N377 158 aa14.7□□□□□ -0.06
MSX2-201ENST00000239243 DEFB105AQ8NG35 78 aa14.7□□□□□ -0.06
MSX2-201ENST00000239243 IGLV5-48A0A075B6I7 105 aa14.68□□□□□ -0.06
MSX2-201ENST00000239243 LINC01547P58512 204 aaPredicted RBP14.68□□□□□ -0.06
MSX2-201ENST00000239243 ATP5EP2Q5VTU8 51 aa14.67□□□□□ -0.06
MSX2-201ENST00000239243 ANAPC13Q9BS18 74 aa14.65□□□□□ -0.06
MSX2-201ENST00000239243 FAM19A1Q7Z5A9 133 aa14.65□□□□□ -0.06
MSX2-201ENST00000239243 PHF5AQ7RTV0 110 aaKnown RBP14.64□□□□□ -0.07
MSX2-201ENST00000239243 WWC2-AS2Q96NR7 200 aa14.64□□□□□ -0.07
MSX2-201ENST00000239243 C1orf134Q5TEV5 83 aa14.62□□□□□ -0.07
MSX2-201ENST00000239243 IGKV3D-7A0A0C4DH55 119 aa14.62□□□□□ -0.07
MSX2-201ENST00000239243 ERC2-IT1O76042 136 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 ST20-AS1Q8NBB2 130 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 FBN3Q75N90 2809 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 LY6G6CO95867 125 aa14.61□□□□□ -0.07
MSX2-201ENST00000239243 SPACA4Q8TDM5 124 aa14.59□□□□□ -0.07
MSX2-201ENST00000239243 DPH3Q96FX2 82 aa14.59□□□□□ -0.07
MSX2-201ENST00000239243 FAM236AA0A1B0GUQ0 79 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 FAM236BA0A1B0GV22 79 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 H0Y9J4 135 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 PRLHP81277 87 aa14.58□□□□□ -0.07
MSX2-201ENST00000239243 RTL8CO15255 209 aa14.58□□□□□ -0.08
MSX2-201ENST00000239243 Q6ZVQ6 151 aa14.56□□□□□ -0.08
MSX2-201ENST00000239243 LINC00476Q8WZB0 136 aa14.56□□□□□ -0.08
MSX2-201ENST00000239243 PANO1I0J062 215 aa14.55□□□□□ -0.08
MSX2-201ENST00000239243 TNP2Q05952 138 aa14.55□□□□□ -0.08
MSX2-201ENST00000239243 EPM2AB3EWF7 344 aa14.54□□□□□ -0.08
MSX2-201ENST00000239243 C3orf22Q8N5N4 141 aa14.54□□□□□ -0.08
MSX2-201ENST00000239243 HIGD2AQ9BW72 106 aa14.54□□□□□ -0.08
MSX2-201ENST00000239243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.53□□□□□ -0.08
MSX2-201ENST00000239243 KRTAP11-1Q8IUC1 163 aa14.53□□□□□ -0.08
MSX2-201ENST00000239243 A0A1B0GW54 56 aa14.51□□□□□ -0.09
MSX2-201ENST00000239243 F8WEM9 126 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 FUSP35637 526 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSX2-201ENST00000239243 UBE2AP49459 152 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 C1orf137Q5JT78 98 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 IGLV5-52A0A0A0MRZ9 124 aa14.49□□□□□ -0.09
MSX2-201ENST00000239243 BCE1O60756 84 aa14.48□□□□□ -0.09
MSX2-201ENST00000239243 HIST1H4AP62805 103 aaKnown RBP14.48□□□□□ -0.09
MSX2-201ENST00000239243 HAMPP81172 84 aa14.47□□□□□ -0.09
MSX2-201ENST00000239243 CXCL6P80162 114 aa14.47□□□□□ -0.09
MSX2-201ENST00000239243 SMIM29Q86T20 159 aa14.47□□□□□ -0.09
MSX2-201ENST00000239243 C3orf84H3BNL1 204 aa14.46□□□□□ -0.09
MSX2-201ENST00000239243 KMT2AQ03164 3969 aa14.45□□□□□ -0.1
MSX2-201ENST00000239243 DNAH2Q9P225 4427 aa14.43□□□□□ -0.1
MSX2-201ENST00000239243 A0A087WVE0 104 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 ATOX1O00244 68 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 Q8NBF4 154 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 SVIPQ8NHG7 77 aa14.42□□□□□ -0.1
MSX2-201ENST00000239243 PLAC8Q9NZF1 115 aa14.41□□□□□ -0.1
MSX2-201ENST00000239243 DNAH6Q9C0G6 4158 aa14.41□□□□□ -0.1
MSX2-201ENST00000239243 SPRR1BP22528 89 aa14.41□□□□□ -0.1
MSX2-201ENST00000239243 A0A1W2PNM2 257 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms