RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 KLK9Q9UKQ9 250 aa2.39□□□□□ -2.03
LINC00397-202ENST00000606785 DNAJC13O75165 2243 aa2.39□□□□□ -2.03
LINC00397-202ENST00000606785 GOLGA4Q13439 2230 aaKnown RBP2.39□□□□□ -2.03
LINC00397-202ENST00000606785 LOC110117498A0A087WWA1 95 aa2.38□□□□□ -2.03
LINC00397-202ENST00000606785 LOC730098B7Z3J9 87 aa2.38□□□□□ -2.03
LINC00397-202ENST00000606785 HAMPP81172 84 aa2.38□□□□□ -2.03
LINC00397-202ENST00000606785 LINC01590Q5TEZ4 76 aa2.38□□□□□ -2.03
LINC00397-202ENST00000606785 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
LINC00397-202ENST00000606785 DOCK10Q96BY6 2186 aa2.38□□□□□ -2.03
LINC00397-202ENST00000606785 SPRR4Q96PI1 79 aa2.38□□□□□ -2.03
LINC00397-202ENST00000606785 NDUFA4O00483 81 aa2.37□□□□□ -2.03
LINC00397-202ENST00000606785 Q6ZTI0 123 aa2.37□□□□□ -2.03
LINC00397-202ENST00000606785 C9orf163Q8N9P6 203 aa2.37□□□□□ -2.03
LINC00397-202ENST00000606785 TNRC6CQ9HCJ0 1690 aaKnown RBP2.37□□□□□ -2.03
LINC00397-202ENST00000606785 A0A0G2JQZ4 141 aa2.36□□□□□ -2.03
LINC00397-202ENST00000606785 RNASE3P12724 160 aaKnown RBP2.36□□□□□ -2.03
LINC00397-202ENST00000606785 DEFB112Q30KQ8 113 aa2.36□□□□□ -2.03
LINC00397-202ENST00000606785 COL4A2P08572 1712 aa2.35□□□□□ -2.03
LINC00397-202ENST00000606785 IGKV3OR2-268A0A0C4DH90 116 aa2.35□□□□□ -2.03
LINC00397-202ENST00000606785 NCR3O14931 201 aa2.35□□□□□ -2.03
LINC00397-202ENST00000606785 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
LINC00397-202ENST00000606785 FREM1Q5H8C1 2179 aa2.34□□□□□ -2.03
LINC00397-202ENST00000606785 ETDCA0A1B0GVM5 59 aa2.34□□□□□ -2.03
LINC00397-202ENST00000606785 COA5Q86WW8 74 aa2.34□□□□□ -2.03
LINC00397-202ENST00000606785 C4orf3Q8WVX3 66 aa2.34□□□□□ -2.03
LINC00397-202ENST00000606785 SMIM2Q9BVW6 85 aa2.34□□□□□ -2.03
LINC00397-202ENST00000606785 SSC5DA1L4H1 1573 aa2.34□□□□□ -2.03
LINC00397-202ENST00000606785 ICE1Q9Y2F5 2266 aa2.34□□□□□ -2.04
LINC00397-202ENST00000606785 TRGV2A0A075B6R0 118 aa2.33□□□□□ -2.04
LINC00397-202ENST00000606785 H3BRN7 92 aa2.33□□□□□ -2.04
LINC00397-202ENST00000606785 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
LINC00397-202ENST00000606785 PATE1Q8WXA2 126 aa2.33□□□□□ -2.04
LINC00397-202ENST00000606785 KCNQ1DNQ9H478 68 aa2.33□□□□□ -2.04
LINC00397-202ENST00000606785 CACNA1GO43497 2377 aa2.33□□□□□ -2.04
LINC00397-202ENST00000606785 CUL9Q8IWT3 2517 aa2.33□□□□□ -2.04
LINC00397-202ENST00000606785 LINC00959A0A1B0GUT2 108 aa2.32□□□□□ -2.04
LINC00397-202ENST00000606785 H3BSH0 61 aa2.31□□□□□ -2.04
LINC00397-202ENST00000606785 IGLV3-1P01715 115 aa2.31□□□□□ -2.04
LINC00397-202ENST00000606785 COX17Q14061 63 aa2.31□□□□□ -2.04
LINC00397-202ENST00000606785 LINC00308Q8TCZ7 52 aa2.31□□□□□ -2.04
LINC00397-202ENST00000606785 PRRC2BQ5JSZ5 2229 aaKnown RBP2.31□□□□□ -2.04
LINC00397-202ENST00000606785 IGKV2-29A2NJV5 120 aaPredicted RBP2.3□□□□□ -2.04
LINC00397-202ENST00000606785 A0A087WTM6 91 aa2.29□□□□□ -2.04
LINC00397-202ENST00000606785 TNCP24821 2201 aa2.29□□□□□ -2.04
LINC00397-202ENST00000606785 IGKV2-40A0A087WW87 121 aaPredicted RBP2.28□□□□□ -2.04
LINC00397-202ENST00000606785 TRBV6-4A0A1B0GX49 114 aa2.28□□□□□ -2.04
LINC00397-202ENST00000606785 NDUFA1O15239 70 aa2.28□□□□□ -2.04
LINC00397-202ENST00000606785 IGKV2D-40P01614 121 aaPredicted RBP2.28□□□□□ -2.04
LINC00397-202ENST00000606785 COX7BP24311 80 aa2.28□□□□□ -2.04
LINC00397-202ENST00000606785 DEFB132Q7Z7B7 95 aa2.28□□□□□ -2.04
LINC00397-202ENST00000606785 SPACA4Q8TDM5 124 aa2.28□□□□□ -2.04
LINC00397-202ENST00000606785 LINC00472Q9H8W2 130 aa2.28□□□□□ -2.04
LINC00397-202ENST00000606785 COL4A5P29400 1685 aa2.28□□□□□ -2.05
LINC00397-202ENST00000606785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.27□□□□□ -2.05
LINC00397-202ENST00000606785 TRGV1A0A0A0MS02 117 aa2.27□□□□□ -2.05
LINC00397-202ENST00000606785 A0A1B0GU69 56 aa2.27□□□□□ -2.05
LINC00397-202ENST00000606785 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
LINC00397-202ENST00000606785 ZFHX3Q15911 3703 aa2.27□□□□□ -2.05
LINC00397-202ENST00000606785 ZFHX2Q9C0A1 2572 aaPredicted RBP2.26□□□□□ -2.05
LINC00397-202ENST00000606785 NBDYA0A0U1RRE5 68 aa2.26□□□□□ -2.05
LINC00397-202ENST00000606785 CRIP1P50238 77 aa2.26□□□□□ -2.05
LINC00397-202ENST00000606785 SMIM11BQ8TCY0 68 aa2.26□□□□□ -2.05
LINC00397-202ENST00000606785 ALPK2Q86TB3 2170 aa2.26□□□□□ -2.05
LINC00397-202ENST00000606785 SDK1Q7Z5N4 2213 aa2.25□□□□□ -2.05
LINC00397-202ENST00000606785 MRPL33O75394 65 aaKnown RBP2.25□□□□□ -2.05
LINC00397-202ENST00000606785 Q96NJ1 140 aa2.25□□□□□ -2.05
LINC00397-202ENST00000606785 BAHCC1Q9P281 2608 aa2.25□□□□□ -2.05
LINC00397-202ENST00000606785 SPAG17Q6Q759 2223 aa2.25□□□□□ -2.05
LINC00397-202ENST00000606785 ABCA4P78363 2273 aa2.24□□□□□ -2.05
LINC00397-202ENST00000606785 LINC00158P58513 81 aa2.24□□□□□ -2.05
LINC00397-202ENST00000606785 RPL37AP61513 92 aaKnown RBP2.24□□□□□ -2.05
LINC00397-202ENST00000606785 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
LINC00397-202ENST00000606785 RP1P56715 2156 aa2.23□□□□□ -2.05
LINC00397-202ENST00000606785 DEFB131BA0A096LNP1 70 aa2.23□□□□□ -2.05
LINC00397-202ENST00000606785 CCL22O00626 93 aa2.23□□□□□ -2.05
LINC00397-202ENST00000606785 PRB1P04280 392 aa2.23□□□□□ -2.05
LINC00397-202ENST00000606785 RPS27P42677 84 aaKnown RBP2.23□□□□□ -2.05
LINC00397-202ENST00000606785 C5orf56Q8N8D9 126 aa2.23□□□□□ -2.05
LINC00397-202ENST00000606785 FN1P02751 2386 aaKnown RBP2.22□□□□□ -2.05
LINC00397-202ENST00000606785 Q6ZQY7 126 aa2.22□□□□□ -2.05
LINC00397-202ENST00000606785 KMT2BQ9UMN6 2715 aaPredicted RBP2.22□□□□□ -2.05
LINC00397-202ENST00000606785 RTTNQ86VV8 2226 aa2.22□□□□□ -2.05
LINC00397-202ENST00000606785 UNC13CQ8NB66 2214 aa2.22□□□□□ -2.05
LINC00397-202ENST00000606785 POLR2KP53803 58 aaKnown RBP2.21□□□□□ -2.06
LINC00397-202ENST00000606785 DEFB103AP81534 67 aa2.21□□□□□ -2.06
LINC00397-202ENST00000606785 ACYP2P14621 99 aa2.2□□□□□ -2.06
LINC00397-202ENST00000606785 PIGYQ3MUY2 71 aa2.2□□□□□ -2.06
LINC00397-202ENST00000606785 SPINK9Q5DT21 86 aa2.2□□□□□ -2.06
LINC00397-202ENST00000606785 DEFB106AQ8N104 65 aa2.2□□□□□ -2.06
LINC00397-202ENST00000606785 M0R2N4 97 aa2.19□□□□□ -2.06
LINC00397-202ENST00000606785 KRTAP13-1Q8IUC0 172 aa2.19□□□□□ -2.06
LINC00397-202ENST00000606785 Q8IZM0 81 aa2.19□□□□□ -2.06
LINC00397-202ENST00000606785 PRCDQ00LT1 54 aa2.18□□□□□ -2.06
LINC00397-202ENST00000606785 KRTAP13-4Q3LI77 160 aa2.18□□□□□ -2.06
LINC00397-202ENST00000606785 Q6ZRN7 208 aaPredicted RBP2.18□□□□□ -2.06
LINC00397-202ENST00000606785 CCL19Q99731 98 aa2.18□□□□□ -2.06
LINC00397-202ENST00000606785 CDKN2A-AS1Q9UH64 79 aa2.18□□□□□ -2.06
LINC00397-202ENST00000606785 RPL39P62891 51 aaKnown RBP2.17□□□□□ -2.06
LINC00397-202ENST00000606785 PRB3Q04118 309 aaPredicted RBP2.17□□□□□ -2.06
LINC00397-202ENST00000606785 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms