RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 EPRSP07814 1512 aaKnown RBP-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 D6R8Y8 96 aa-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 M0R2T5 61 aa-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 LEPROTL1O95214 131 aa-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 NCMAPQ5T1S8 102 aa-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 MUSTN1Q8IVN3 82 aa-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 NKTRP30414 1462 aaKnown RBP-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 IQSEC2Q5JU85 1478 aa-0.11□□□□□ -2.43
PPP4R1-227ENST00000583988 ACANP16112 2415 aa-0.12□□□□□ -2.43
PPP4R1-227ENST00000583988 TRBV7-7A0A0K0K1E9 115 aa-0.12□□□□□ -2.43
PPP4R1-227ENST00000583988 CCL22O00626 93 aa-0.12□□□□□ -2.43
PPP4R1-227ENST00000583988 SMIM11AP58511 58 aa-0.12□□□□□ -2.43
PPP4R1-227ENST00000583988 FANCAO15360 1455 aa-0.12□□□□□ -2.43
PPP4R1-227ENST00000583988 HSPG2P98160 4391 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 CUX1P39880 1505 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 SETXQ7Z333 2677 aaKnown RBP-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 SAMD9Q5K651 1589 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 NRXN1Q9ULB1 1477 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 FAT2Q9NYQ8 4349 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 SPTY2D1-AS1A0A0U1RR47 76 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 F8WEM9 126 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 SPRR2BP35325 72 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 PSENENQ9NZ42 101 aa-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 FLNBO75369 2602 aaKnown RBP-0.13□□□□□ -2.43
PPP4R1-227ENST00000583988 AKAP12Q02952 1782 aa-0.14□□□□□ -2.43
PPP4R1-227ENST00000583988 MYH4Q9Y623 1939 aa-0.14□□□□□ -2.43
PPP4R1-227ENST00000583988 GYPAP02724 150 aa-0.14□□□□□ -2.43
PPP4R1-227ENST00000583988 CRYBG1Q9Y4K1 1723 aa-0.14□□□□□ -2.43
PPP4R1-227ENST00000583988 CLIP1P30622 1438 aa-0.14□□□□□ -2.43
PPP4R1-227ENST00000583988 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 ANKRD26Q9UPS8 1709 aa-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 STAB1Q9NY15 2570 aa-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 PKIAP61925 76 aa-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 MRPL34Q9BQ48 92 aaKnown RBP-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 CNOT1A5YKK6 2376 aaKnown RBP-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 SLIT1O75093 1534 aa-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.15□□□□□ -2.43
PPP4R1-227ENST00000583988 PKD1L3Q7Z443 1732 aa-0.16□□□□□ -2.43
PPP4R1-227ENST00000583988 ATP10BO94823 1461 aa-0.16□□□□□ -2.43
PPP4R1-227ENST00000583988 ABCC10Q5T3U5 1492 aa-0.16□□□□□ -2.43
PPP4R1-227ENST00000583988 LRP2P98164 4655 aa-0.16□□□□□ -2.43
PPP4R1-227ENST00000583988 PEA15Q15121 130 aa-0.16□□□□□ -2.44
PPP4R1-227ENST00000583988 H1FX-AS1Q4G0G2 97 aa-0.16□□□□□ -2.44
PPP4R1-227ENST00000583988 TENM2Q9NT68 2774 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 IGLC2P0DOY2 106 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 IGLC3P0DOY3 106 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 DEFB112Q30KQ8 113 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 HEPN1Q6WQI6 88 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 UBR3Q6ZT12 1888 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 HECTD4Q9Y4D8 3996 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 BCORQ6W2J9 1755 aa-0.17□□□□□ -2.44
PPP4R1-227ENST00000583988 RPL38P63173 70 aaKnown RBP-0.18□□□□□ -2.44
PPP4R1-227ENST00000583988 DEFB135Q30KP9 77 aa-0.18□□□□□ -2.44
PPP4R1-227ENST00000583988 SNHG12Q9BXW3 62 aa-0.18□□□□□ -2.44
PPP4R1-227ENST00000583988 CDKN2A-AS1Q9UH64 79 aa-0.18□□□□□ -2.44
PPP4R1-227ENST00000583988 UBE2D4Q9Y2X8 147 aa-0.18□□□□□ -2.44
PPP4R1-227ENST00000583988 TROQ12816 1431 aaPredicted RBP-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 COL6A3P12111 3177 aa-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 HMGN2P05204 90 aaKnown RBP-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 PLGLAQ15195 96 aa-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 NMSQ5H8A3 153 aa-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 Q9H521 79 aa-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 PRKDCP78527 4128 aaKnown RBP-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 RGPD2P0DJD1 1756 aa-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 MUC2Q02817 5179 aa-0.19□□□□□ -2.44
PPP4R1-227ENST00000583988 MYO3AQ8NEV4 1616 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 QSER1Q2KHR3 1735 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 A0A1B0GUT8 65 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 CYB5AP00167 134 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 C9orf62Q8N4C0 152 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 HIGD1BQ9P298 99 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 PCNX1Q96RV3 2341 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 ALKQ9UM73 1620 aa-0.2□□□□□ -2.44
PPP4R1-227ENST00000583988 RGPD4Q7Z3J3 1758 aa-0.21□□□□□ -2.44
PPP4R1-227ENST00000583988 CCNB3Q8WWL7 1395 aa-0.21□□□□□ -2.44
PPP4R1-227ENST00000583988 CEP162Q5TB80 1403 aa-0.21□□□□□ -2.44
PPP4R1-227ENST00000583988 PCLOQ9Y6V0 5065 aa-0.22□□□□□ -2.44
PPP4R1-227ENST00000583988 COX7BP24311 80 aa-0.22□□□□□ -2.44
PPP4R1-227ENST00000583988 STAB2Q8WWQ8 2551 aa-0.22□□□□□ -2.45
PPP4R1-227ENST00000583988 LRRC9Q6ZRR7 1453 aa-0.22□□□□□ -2.45
PPP4R1-227ENST00000583988 MAGI2Q86UL8 1455 aa-0.22□□□□□ -2.45
PPP4R1-227ENST00000583988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.22□□□□□ -2.452e-7■■■■■ 27.8
PPP4R1-227ENST00000583988 SRRM2Q9UQ35 2752 aaKnown RBP-0.23□□□□□ -2.45
PPP4R1-227ENST00000583988 C20orf78Q9BR46 151 aa-0.23□□□□□ -2.45
PPP4R1-227ENST00000583988 V9GYS6 101 aa-0.23□□□□□ -2.45
PPP4R1-227ENST00000583988 KNL1Q8NG31 2342 aa-0.23□□□□□ -2.45
PPP4R1-227ENST00000583988 RGPD3A6NKT7 1758 aaPredicted RBP-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 RGPD8O14715 1765 aaPredicted RBP-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 RGPD5Q99666 1765 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 IQCF6A8MYZ5 107 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 PYY3Q5JQD4 70 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 COX6B2Q6YFQ2 88 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 WFDC13Q8IUB5 93 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 GAFA1Q96PS6 74 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 ATP7BP35670 1465 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 LRRC7Q96NW7 1537 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 PREX1Q8TCU6 1659 aa-0.24□□□□□ -2.45
PPP4R1-227ENST00000583988 NBEAL1Q6ZS30 2694 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms