RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 TNCP24821 2201 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 CACNA1CQ13936 2221 aa1.87□□□□□ -2.11
PTPRM-204ENST00000577468 RANBP2P49792 3224 aaKnown RBP1.87□□□□□ -2.11
PTPRM-204ENST00000577468 TTC28Q96AY4 2481 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 CENPFP49454 3210 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 CHD8Q9HCK8 2581 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 MKI67P46013 3256 aaKnown RBP1.86□□□□□ -2.11
PTPRM-204ENST00000577468 TRGV4A0A0C4DH28 118 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 NCR3O14931 201 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 CRIP1P50238 77 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 NDPQ00604 133 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 LINC00308Q8TCZ7 52 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 KCNQ1DNQ9H478 68 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 PRR14LQ5THK1 2151 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 BRCA2P51587 3418 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 BDP1A6H8Y1 2624 aa1.86□□□□□ -2.11
PTPRM-204ENST00000577468 ZFHX4Q86UP3 3567 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 UNC80Q8N2C7 3258 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 IGKV3OR2-268A0A0C4DH90 116 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 ETDCA0A1B0GVM5 59 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 ZNF861PO60384 105 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 DSCR10P59022 87 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 DEFB116Q30KQ4 102 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 PIGYQ3MUY2 71 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 C9orf129Q5T035 196 aaKnown RBP1.85□□□□□ -2.11
PTPRM-204ENST00000577468 SPINK14Q6IE38 97 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 PRO3102Q9H379 93 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 BPTFQ12830 3046 aa1.85□□□□□ -2.11
PTPRM-204ENST00000577468 HTTP42858 3142 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 LINC00959A0A1B0GUT2 108 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 IGKV2-29A2NJV5 120 aaPredicted RBP1.84□□□□□ -2.11
PTPRM-204ENST00000577468 IGKV3-15P01624 115 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 IGKV4-1P06312 121 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 POLR2KP53803 58 aaKnown RBP1.84□□□□□ -2.11
PTPRM-204ENST00000577468 KRTAP10-1P60331 282 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 PRCDQ00LT1 54 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 COA5Q86WW8 74 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 ST20-AS1Q8NBB2 130 aa1.84□□□□□ -2.11
PTPRM-204ENST00000577468 TRGV2A0A075B6R0 118 aa1.83□□□□□ -2.12
PTPRM-204ENST00000577468 A0A1W2PPR1 153 aa1.83□□□□□ -2.12
PTPRM-204ENST00000577468 MUC6Q6W4X9 2439 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 COX17Q14061 63 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 PATE1Q8WXA2 126 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 NCOR1O75376 2440 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 LAMA3Q16787 3333 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 ALPK2Q86TB3 2170 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 KNTC1P50748 2209 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 UNC13CQ8NB66 2214 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 PRUNE2Q8WUY3 3088 aa1.82□□□□□ -2.12
PTPRM-204ENST00000577468 PIEZO1Q92508 2521 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 SPAG17Q6Q759 2223 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 IGLV4-60A0A075B6I1 120 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 Q6ZTI0 123 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 SMIM11BQ8TCY0 68 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 VCANP13611 3396 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 ZNF462Q96JM2 2506 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 LAMA2P24043 3122 aaKnown RBP1.81□□□□□ -2.12
PTPRM-204ENST00000577468 ZFHX2Q9C0A1 2572 aaPredicted RBP1.81□□□□□ -2.12
PTPRM-204ENST00000577468 MAST4O15021 2626 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 USF3Q68DE3 2245 aa1.81□□□□□ -2.12
PTPRM-204ENST00000577468 EYSQ5T1H1 3165 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 TRANK1O15050 2925 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.8□□□□□ -2.12
PTPRM-204ENST00000577468 A0A087WTM6 91 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 IGKV2-40A0A087WW87 121 aaPredicted RBP1.8□□□□□ -2.12
PTPRM-204ENST00000577468 TRGV1A0A0A0MS02 117 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 A0A1B0GU69 56 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 TRBV6-4A0A1B0GX49 114 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 FAM168BA1KXE4 195 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 IGKV2D-40P01614 121 aaPredicted RBP1.8□□□□□ -2.12
PTPRM-204ENST00000577468 COX7BP24311 80 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 SPINK9Q5DT21 86 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 TYMSOSQ8TAI1 123 aa1.8□□□□□ -2.12
PTPRM-204ENST00000577468 COL27A1Q8IZC6 1860 aaPredicted RBP1.8□□□□□ -2.12
PTPRM-204ENST00000577468 ZDBF2Q9HCK1 2354 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 ATRXP46100 2492 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 SPTBN4Q9H254 2564 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 DNAH12Q6ZR08 3092 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 H3BRN7 92 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 MRPL33O75394 65 aaKnown RBP1.79□□□□□ -2.12
PTPRM-204ENST00000577468 PRB2P02812 416 aaPredicted RBP1.79□□□□□ -2.12
PTPRM-204ENST00000577468 LINC00472Q9H8W2 130 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 PSORS1C2Q9UIG4 136 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 RP1P56715 2156 aa1.79□□□□□ -2.12
PTPRM-204ENST00000577468 SETXQ7Z333 2677 aaKnown RBP1.79□□□□□ -2.12
PTPRM-204ENST00000577468 SPTBN5Q9NRC6 3674 aaKnown RBP1.79□□□□□ -2.12
PTPRM-204ENST00000577468 SDK1Q7Z5N4 2213 aa1.78□□□□□ -2.12
PTPRM-204ENST00000577468 IGKV2-28A0A075B6P5 120 aa1.78□□□□□ -2.12
PTPRM-204ENST00000577468 DEFB131BA0A096LNP1 70 aa1.78□□□□□ -2.12
PTPRM-204ENST00000577468 NBDYA0A0U1RRE5 68 aa1.78□□□□□ -2.12
PTPRM-204ENST00000577468 IGKV2D-28P01615 120 aa1.78□□□□□ -2.12
PTPRM-204ENST00000577468 LINC00158P58513 81 aa1.78□□□□□ -2.12
PTPRM-204ENST00000577468 WDR87Q6ZQQ6 2873 aa1.78□□□□□ -2.12
PTPRM-204ENST00000577468 PTPRZ1P23471 2315 aaPredicted RBP1.78□□□□□ -2.13
PTPRM-204ENST00000577468 CADP27708 2225 aa1.78□□□□□ -2.13
PTPRM-204ENST00000577468 SEC16AO15027 2179 aa1.78□□□□□ -2.13
PTPRM-204ENST00000577468 ABCA4P78363 2273 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms