RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 CCL24O00175 119 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 BPY2O14599 106 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 CYP4F30PQ9H0H9 118 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 LINC00474Q9P2X8 69 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 SNURFQ9Y675 71 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 CDH23Q9H251 3354 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 HERC1Q15751 4861 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 ARFGEF3Q5TH69 2177 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 FN1P02751 2386 aaKnown RBP2.37□□□□□ -2.03
LINC01416-201ENST00000563553 IGHV3-73A0A0B4J1V6 119 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 HAMPP81172 84 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 WFDC9Q8NEX5 89 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 OCR1Q9BZK8 76 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 A0A096LNT2 108 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 LOC100131303A0A0U1RQF7 123 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 IGHV3-11P01762 117 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 COX7BP24311 80 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 CMC4P56277 68 aaPredicted RBP2.36□□□□□ -2.03
LINC01416-201ENST00000563553 UBE2BP63146 152 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 Q75L30 129 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 TM2D3Q9BRN9 247 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 ZFHX4Q86UP3 3567 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 USP34Q70CQ2 3546 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 IGKV3-7A0A075B6H7 116 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 NDUFS5O43920 106 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 NDUFB1O75438 58 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 DAD1P61803 113 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 C5orf42Q9H799 3197 aa2.36□□□□□ -2.03
LINC01416-201ENST00000563553 ELOF1P60002 83 aaKnown RBP2.35□□□□□ -2.03
LINC01416-201ENST00000563553 UBE2E2Q96LR5 201 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 TOMM7Q9P0U1 55 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 CFAP47Q6ZTR5 3102 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 WDFY4Q6ZS81 3184 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 IGHV4-61A0A0C4DH41 118 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 VPREB1P12018 145 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 MRPL55Q7Z7F7 128 aaKnown RBP2.35□□□□□ -2.03
LINC01416-201ENST00000563553 CELA1Q9UNI1 258 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 OTOGLQ3ZCN5 2332 aa2.35□□□□□ -2.03
LINC01416-201ENST00000563553 SPTBN2O15020 2390 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 ZFYVE26Q68DK2 2539 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 TRBV6-8A0A0A6YYG3 113 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 IGKV4-1P06312 121 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 UBE2AP49459 152 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 DEFB131AP59861 70 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 FAM229BQ4G0N7 80 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 C6orf99Q4VX62 202 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 Q6ZTI0 123 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 KTN1-AS1Q86SY8 53 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 ZCCHC13Q8WW36 166 aaKnown RBP2.34□□□□□ -2.03
LINC01416-201ENST00000563553 C16orf74Q96GX8 76 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 EP300Q09472 2414 aaPredicted RBP2.34□□□□□ -2.03
LINC01416-201ENST00000563553 TECTAO75443 2155 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 PLCE1Q9P212 2302 aa2.34□□□□□ -2.03
LINC01416-201ENST00000563553 FBN1P35555 2871 aaKnown RBP2.34□□□□□ -2.04
LINC01416-201ENST00000563553 H3BUX3 64 aa2.34□□□□□ -2.04
LINC01416-201ENST00000563553 DIRC1Q969H9 104 aa2.34□□□□□ -2.04
LINC01416-201ENST00000563553 Q9UF83 564 aa2.34□□□□□ -2.04
LINC01416-201ENST00000563553 CADP27708 2225 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 CEP250Q9BV73 2442 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 DCHS1Q96JQ0 3298 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 GVQW2A0A096LPI5 108 aaPredicted RBP2.33□□□□□ -2.04
LINC01416-201ENST00000563553 TRGV1A0A0A0MS02 117 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 H3BPC8 53 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 CD164L2Q6UWJ8 174 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 ABCA1O95477 2261 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 A0A0J9YWU9 116 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 KIAA0087Q14695 138 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 Q6ZRP5 223 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 SPANXA2-OT1Q8N9U9 137 aa2.33□□□□□ -2.04
LINC01416-201ENST00000563553 XIRP2A4UGR9 3374 aa2.32□□□□□ -2.04
LINC01416-201ENST00000563553 TRAV22A0A0B4J277 110 aa2.32□□□□□ -2.04
LINC01416-201ENST00000563553 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
LINC01416-201ENST00000563553 Q6ZQY7 126 aa2.32□□□□□ -2.04
LINC01416-201ENST00000563553 PHF5AQ7RTV0 110 aaKnown RBP2.32□□□□□ -2.04
LINC01416-201ENST00000563553 Q9BRP9 147 aa2.32□□□□□ -2.04
LINC01416-201ENST00000563553 WDR87Q6ZQQ6 2873 aa2.32□□□□□ -2.04
LINC01416-201ENST00000563553 TENM4Q6N022 2769 aa2.32□□□□□ -2.04
LINC01416-201ENST00000563553 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
LINC01416-201ENST00000563553 ETDCA0A1B0GVM5 59 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 C19orf84I3L1E1 186 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 PSCAO43653 123 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 HTN1P15515 57 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 LY6EQ16553 131 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 C1orf64Q8NEQ6 169 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 DEFB124Q8NES8 71 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 LINC00588Q9Y4M8 146 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 TENM1Q9UKZ4 2725 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 HIGD2BQ4VC39 106 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 C4orf3Q8WVX3 66 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 STAB1Q9NY15 2570 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 REV3LO60673 3130 aa2.31□□□□□ -2.04
LINC01416-201ENST00000563553 TRGV2A0A075B6R0 118 aa2.3□□□□□ -2.04
LINC01416-201ENST00000563553 TRGV4A0A0C4DH28 118 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms