RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SLPIP03973 132 aa4.38□□□□□ -1.71
SNHG1-225ENST00000545920 SPART-AS1P0CW21 52 aa4.38□□□□□ -1.71
SNHG1-225ENST00000545920 WFDC11Q8NEX6 87 aa4.38□□□□□ -1.71
SNHG1-225ENST00000545920 WFDC10AQ9H1F0 79 aa4.38□□□□□ -1.71
SNHG1-225ENST00000545920 TRAV23DV6A0A075B6W5 121 aa4.37□□□□□ -1.71
SNHG1-225ENST00000545920 TRBV7-4A0A0J9YYF1 115 aa4.37□□□□□ -1.71
SNHG1-225ENST00000545920 EGFEM1PQ0D2K5 195 aa4.37□□□□□ -1.71
SNHG1-225ENST00000545920 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
SNHG1-225ENST00000545920 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-225ENST00000545920 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
SNHG1-225ENST00000545920 LAMA5O15230 3695 aa4.37□□□□□ -1.71
SNHG1-225ENST00000545920 CYSRT1A8MQ03 144 aa4.36□□□□□ -1.71
SNHG1-225ENST00000545920 M0R378 163 aa4.36□□□□□ -1.71
SNHG1-225ENST00000545920 COX7BP24311 80 aa4.36□□□□□ -1.71
SNHG1-225ENST00000545920 ELOF1P60002 83 aaKnown RBP4.36□□□□□ -1.71
SNHG1-225ENST00000545920 ENHOQ6UWT2 76 aa4.36□□□□□ -1.71
SNHG1-225ENST00000545920 C11orf68Q9H3H3 251 aaKnown RBP4.36□□□□□ -1.71
SNHG1-225ENST00000545920 ACACBO00763 2458 aa4.35□□□□□ -1.71
SNHG1-225ENST00000545920 A0A087WVE0 104 aa4.35□□□□□ -1.71
SNHG1-225ENST00000545920 EPM2AB3EWF7 344 aa4.35□□□□□ -1.71
SNHG1-225ENST00000545920 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-225ENST00000545920 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-225ENST00000545920 Q6ZVQ6 151 aa4.35□□□□□ -1.71
SNHG1-225ENST00000545920 Q8NAQ8 132 aa4.35□□□□□ -1.71
SNHG1-225ENST00000545920 SERP1Q9Y6X1 66 aa4.35□□□□□ -1.71
SNHG1-225ENST00000545920 DCHS1Q96JQ0 3298 aa4.34□□□□□ -1.71
SNHG1-225ENST00000545920 NAV2Q8IVL1 2488 aa4.34□□□□□ -1.71
SNHG1-225ENST00000545920 NCOR2Q9Y618 2525 aa4.34□□□□□ -1.71
SNHG1-225ENST00000545920 USP9YO00507 2555 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-225ENST00000545920 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.71
SNHG1-225ENST00000545920 FAM236CP0DP71 79 aa4.34□□□□□ -1.71
SNHG1-225ENST00000545920 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
SNHG1-225ENST00000545920 C3orf56Q8N813 242 aa4.34□□□□□ -1.71
SNHG1-225ENST00000545920 VPREB1P12018 145 aa4.33□□□□□ -1.72
SNHG1-225ENST00000545920 PRR3P79522 188 aaKnown RBP4.33□□□□□ -1.72
SNHG1-225ENST00000545920 CLPSL2Q6UWE3 100 aa4.33□□□□□ -1.72
SNHG1-225ENST00000545920 Q6ZQY7 126 aa4.33□□□□□ -1.72
SNHG1-225ENST00000545920 FAM19A1Q7Z5A9 133 aa4.33□□□□□ -1.72
SNHG1-225ENST00000545920 SPATA3Q8NHX4 192 aa4.33□□□□□ -1.72
SNHG1-225ENST00000545920 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
SNHG1-225ENST00000545920 PRB1P04280 392 aa4.32□□□□□ -1.72
SNHG1-225ENST00000545920 WFDC9Q8NEX5 89 aa4.32□□□□□ -1.72
SNHG1-225ENST00000545920 C6orf48Q9UBA6 75 aa4.32□□□□□ -1.72
SNHG1-225ENST00000545920 USP9XQ93008 2570 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-225ENST00000545920 ANKRD17O75179 2603 aaKnown RBP4.31□□□□□ -1.72
SNHG1-225ENST00000545920 IGLV10-54A0A075B6I4 117 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 A0A096LPF7 62 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 HAMPP81172 84 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 DEFB135Q30KP9 77 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 C9orf116Q5BN46 136 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-225ENST00000545920 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 Q8N1X5 172 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 C20orf197Q8N268 126 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
SNHG1-225ENST00000545920 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
SNHG1-225ENST00000545920 H7BZZ5 65 aa4.3□□□□□ -1.72
SNHG1-225ENST00000545920 Q8NDZ9 215 aa4.3□□□□□ -1.72
SNHG1-225ENST00000545920 CAMK2N2Q96S95 79 aa4.3□□□□□ -1.72
SNHG1-225ENST00000545920 DHRS4-AS1Q9P1J3 65 aa4.3□□□□□ -1.72
SNHG1-225ENST00000545920 MYO9AB2RTY4 2548 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 PIEZO1Q92508 2521 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 ZNF462Q96JM2 2506 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 PTPN13Q12923 2485 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 SMIM26A0A096LP01 95 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 TLX1NBP0CAT3 122 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 KRTAP10-3P60369 221 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 MRAPQ8TCY5 172 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 CYSTM1Q9H1C7 97 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 KCNQ1DNQ9H478 68 aa4.29□□□□□ -1.72
SNHG1-225ENST00000545920 RELNP78509 3460 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 IGLV5-48A0A075B6I7 105 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 KRTAP26-1Q6PEX3 210 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 C2CD3Q4AC94 2353 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 SPTBN4Q9H254 2564 aa4.28□□□□□ -1.72
SNHG1-225ENST00000545920 FUSP35637 526 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNHG1-225ENST00000545920 NREPQ16612 68 aa4.27□□□□□ -1.73
SNHG1-225ENST00000545920 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
SNHG1-225ENST00000545920 USP24Q9UPU5 2620 aa4.27□□□□□ -1.73
SNHG1-225ENST00000545920 FAM208BQ5VWN6 2430 aa4.26□□□□□ -1.73
SNHG1-225ENST00000545920 J3QKU1 62 aa4.26□□□□□ -1.73
SNHG1-225ENST00000545920 BPY2O14599 106 aa4.26□□□□□ -1.73
SNHG1-225ENST00000545920 SYCNQ0VAF6 134 aa4.26□□□□□ -1.73
SNHG1-225ENST00000545920 Q5XG85 94 aa4.26□□□□□ -1.73
SNHG1-225ENST00000545920 NKAPP1Q8N9T2 125 aa4.26□□□□□ -1.73
SNHG1-225ENST00000545920 CHD6Q8TD26 2715 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
SNHG1-225ENST00000545920 KPRPQ5T749 579 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-225ENST00000545920 Q6ZRU5 148 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 C15orf56Q8N910 161 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 TMEM254Q8TBM7 123 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 RMI2Q96E14 147 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 XAGE1AQ9HD64 81 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 NOTCH3Q9UM47 2321 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 ITPR1Q14643 2758 aa4.25□□□□□ -1.73
SNHG1-225ENST00000545920 CELSR1Q9NYQ6 3014 aa4.24□□□□□ -1.73
SNHG1-225ENST00000545920 TRAV10A0A0B4J240 114 aa4.24□□□□□ -1.73
SNHG1-225ENST00000545920 OXTP01178 125 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms