RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 A6NDX4 124 aa4□□□□□ -1.77
SNHG1-211ENST00000539921 C16orf74Q96GX8 76 aa4□□□□□ -1.77
SNHG1-211ENST00000539921 DHRS4-AS1Q9P1J3 65 aa4□□□□□ -1.77
SNHG1-211ENST00000539921 KLK12Q9UKR0 248 aa4□□□□□ -1.77
SNHG1-211ENST00000539921 DNAH14Q0VDD8 3507 aa4□□□□□ -1.77
SNHG1-211ENST00000539921 ZFHX3Q15911 3703 aa3.99□□□□□ -1.77
SNHG1-211ENST00000539921 GPR179Q6PRD1 2367 aa3.99□□□□□ -1.77
SNHG1-211ENST00000539921 RIF1Q5UIP0 2472 aaKnown RBP3.99□□□□□ -1.77
SNHG1-211ENST00000539921 TRGV1A0A0A0MS02 117 aa3.99□□□□□ -1.77
SNHG1-211ENST00000539921 IGHV6-1A0A0B4J1U7 121 aa3.99□□□□□ -1.77
SNHG1-211ENST00000539921 A0A1W2PNU3 283 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-211ENST00000539921 DCHS1Q96JQ0 3298 aa3.99□□□□□ -1.77
SNHG1-211ENST00000539921 CEP250Q9BV73 2442 aa3.99□□□□□ -1.77
SNHG1-211ENST00000539921 EP300Q09472 2414 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-211ENST00000539921 A0A1W2PNM2 257 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 K7EQZ3 153 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 FSHBP01225 129 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 CMC4P56277 68 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-211ENST00000539921 DEFB131AP59861 70 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 PRR4Q16378 134 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 C11orf71Q6IPW1 123 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 Q8NDZ9 215 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 SPTBN4Q9H254 2564 aa3.98□□□□□ -1.77
SNHG1-211ENST00000539921 SPTBN1Q01082 2364 aaKnown RBP3.97□□□□□ -1.77
SNHG1-211ENST00000539921 LYNX1G3V0Z9 82 aa3.97□□□□□ -1.77
SNHG1-211ENST00000539921 IGLV1-51P01701 117 aa3.97□□□□□ -1.77
SNHG1-211ENST00000539921 LYNX1P0DP58 116 aa3.97□□□□□ -1.77
SNHG1-211ENST00000539921 SPINK7P58062 85 aa3.97□□□□□ -1.77
SNHG1-211ENST00000539921 C1orf137Q5JT78 98 aa3.97□□□□□ -1.77
SNHG1-211ENST00000539921 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
SNHG1-211ENST00000539921 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
SNHG1-211ENST00000539921 LAMA1P25391 3075 aa3.96□□□□□ -1.77
SNHG1-211ENST00000539921 NBEAQ8NFP9 2946 aa3.96□□□□□ -1.78
SNHG1-211ENST00000539921 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
SNHG1-211ENST00000539921 HTN1P15515 57 aa3.96□□□□□ -1.78
SNHG1-211ENST00000539921 DEFB112Q30KQ8 113 aa3.96□□□□□ -1.78
SNHG1-211ENST00000539921 LINC00476Q8WZB0 136 aa3.96□□□□□ -1.78
SNHG1-211ENST00000539921 MAP6D1Q9H9H5 199 aa3.96□□□□□ -1.78
SNHG1-211ENST00000539921 RPL37AP8A6NKH3 93 aa3.95□□□□□ -1.78
SNHG1-211ENST00000539921 EGFEM1PQ0D2K5 195 aa3.95□□□□□ -1.78
SNHG1-211ENST00000539921 Q8N377 158 aa3.95□□□□□ -1.78
SNHG1-211ENST00000539921 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
SNHG1-211ENST00000539921 ZNF702PQ9H963 129 aa3.95□□□□□ -1.78
SNHG1-211ENST00000539921 SPTBN2O15020 2390 aa3.94□□□□□ -1.78
SNHG1-211ENST00000539921 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
SNHG1-211ENST00000539921 H3BUX3 64 aa3.94□□□□□ -1.78
SNHG1-211ENST00000539921 ATP1A1-AS1Q5TC04 95 aa3.94□□□□□ -1.78
SNHG1-211ENST00000539921 CHCHD10Q8WYQ3 142 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-211ENST00000539921 ARRDC1-AS1Q9H2J1 176 aa3.94□□□□□ -1.78
SNHG1-211ENST00000539921 CEP295Q9C0D2 2601 aa3.94□□□□□ -1.78
SNHG1-211ENST00000539921 IGKV3OR2-268A0A0C4DH90 116 aa3.93□□□□□ -1.78
SNHG1-211ENST00000539921 SPAG11AQ6PDA7 123 aa3.93□□□□□ -1.78
SNHG1-211ENST00000539921 NCOR2Q9Y618 2525 aa3.93□□□□□ -1.78
SNHG1-211ENST00000539921 PTPRZ1P23471 2315 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-211ENST00000539921 PKDREJQ9NTG1 2253 aa3.92□□□□□ -1.78
SNHG1-211ENST00000539921 Q6ZR54 194 aa3.92□□□□□ -1.78
SNHG1-211ENST00000539921 ZZEF1O43149 2961 aa3.92□□□□□ -1.78
SNHG1-211ENST00000539921 IGLV1-50A0A075B6I6 118 aa3.91□□□□□ -1.78
SNHG1-211ENST00000539921 CYSRT1A8MQ03 144 aa3.91□□□□□ -1.78
SNHG1-211ENST00000539921 A8MWP4 228 aa3.91□□□□□ -1.78
SNHG1-211ENST00000539921 PATE3B3GLJ2 98 aa3.91□□□□□ -1.78
SNHG1-211ENST00000539921 PRB1P04280 392 aa3.91□□□□□ -1.78
SNHG1-211ENST00000539921 MAP1BP46821 2468 aaKnown RBP3.91□□□□□ -1.78
SNHG1-211ENST00000539921 Q6ZRX8 168 aa3.91□□□□□ -1.78
SNHG1-211ENST00000539921 CSNK1G2-AS1Q8NCQ2 148 aa3.91□□□□□ -1.78
SNHG1-211ENST00000539921 ZNF706Q9Y5V0 76 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-211ENST00000539921 SPRR1AP35321 89 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 ROMO1P60602 79 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 REG3AQ06141 175 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 DEFB109BQ30KR1 87 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 UNQ6190/PRO20217Q6UXQ8 127 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 PRR34Q9NV39 138 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 CHD8Q9HCK8 2581 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 MED13LQ71F56 2210 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 ASPMQ8IZT6 3477 aa3.9□□□□□ -1.79
SNHG1-211ENST00000539921 TPRP12270 2363 aaKnown RBP3.89□□□□□ -1.79
SNHG1-211ENST00000539921 WNK1Q9H4A3 2382 aa3.89□□□□□ -1.79
SNHG1-211ENST00000539921 WDFY3Q8IZQ1 3526 aa3.89□□□□□ -1.79
SNHG1-211ENST00000539921 ACACBO00763 2458 aa3.89□□□□□ -1.79
SNHG1-211ENST00000539921 EPG5Q9HCE0 2579 aa3.89□□□□□ -1.79
SNHG1-211ENST00000539921 CNOT1A5YKK6 2376 aaKnown RBP3.89□□□□□ -1.79
SNHG1-211ENST00000539921 USP24Q9UPU5 2620 aa3.89□□□□□ -1.79
SNHG1-211ENST00000539921 KMT2BQ9UMN6 2715 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-211ENST00000539921 FREM2Q5SZK8 3169 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 B4DSR2 109 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 UQCR11O14957 56 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 HRES1P13985 223 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 DEFB124Q8NES8 71 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 C7orf33Q8WU49 177 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 NOP10Q9NPE3 64 aaKnown RBP3.88□□□□□ -1.79
SNHG1-211ENST00000539921 C6orf48Q9UBA6 75 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 PRO0255Q9UI72 69 aa3.88□□□□□ -1.79
SNHG1-211ENST00000539921 KRTAP4-16G5E9R7 235 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-211ENST00000539921 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
SNHG1-211ENST00000539921 WFDC13Q8IUB5 93 aa3.87□□□□□ -1.79
SNHG1-211ENST00000539921 SPEGQ15772 3267 aa3.87□□□□□ -1.79
SNHG1-211ENST00000539921 IGF2RP11717 2491 aa3.87□□□□□ -1.79
SNHG1-211ENST00000539921 SORL1Q92673 2214 aa3.87□□□□□ -1.79
SNHG1-211ENST00000539921 SDK1Q7Z5N4 2213 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms