RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 KLK12Q9UKR0 248 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 FRYLO94915 3013 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 SORL1Q92673 2214 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 SPEGQ15772 3267 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 TRIOO75962 3097 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 FREM2Q5SZK8 3169 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 SPTBN1Q01082 2364 aaKnown RBP2.06□□□□□ -2.08
CSDE1-216ENST00000534389 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.06□□□□□ -2.08
CSDE1-216ENST00000534389 TRGV2A0A075B6R0 118 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 IGKV3OR2-268A0A0C4DH90 116 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 HCG22E2RYF7 251 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 PDE6GP18545 87 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 UBE2AP49459 152 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 MOBPQ13875 183 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 KIAA0087Q14695 138 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 C9orf116Q5BN46 136 aaPredicted RBP2.06□□□□□ -2.08
CSDE1-216ENST00000534389 C10orf99Q6UWK7 81 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 Q6ZQY7 126 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 C7orf65Q6ZTY9 151 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 DIRC1Q969H9 104 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 USMG5Q96IX5 58 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 CR1P17927 2039 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 ZZEF1O43149 2961 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 PTPRZ1P23471 2315 aaPredicted RBP2.06□□□□□ -2.08
CSDE1-216ENST00000534389 SPTBN2O15020 2390 aa2.06□□□□□ -2.08
CSDE1-216ENST00000534389 TECTAO75443 2155 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 LINC00959A0A1B0GUT2 108 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 IGLV6-57P01721 117 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 DEFB131AP59861 70 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 DEFB109BQ30KR1 87 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 ATP11AUNQ6ZP68 121 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 SPTSSBQ8NFR3 76 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 TYMSOSQ8TAI1 123 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 PRR15LQ9BU68 103 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 PLAC8Q9NZF1 115 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 GPR179Q6PRD1 2367 aa2.05□□□□□ -2.08
CSDE1-216ENST00000534389 RP1L1Q8IWN7 2480 aaPredicted RBP2.05□□□□□ -2.08
CSDE1-216ENST00000534389 CFAP54Q96N23 3096 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 VPS13AQ96RL7 3174 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 TRGV4A0A0C4DH28 118 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 A0A1W2PPR1 153 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 A6NDX4 124 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 LYRM9A8MSI8 78 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 H3BUA1 57 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 COX7BP24311 80 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 LAMA1P25391 3075 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 C11orf71Q6IPW1 123 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 ADM2Q7Z4H4 148 aa2.04□□□□□ -2.08
CSDE1-216ENST00000534389 CEP290O15078 2479 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 DSPP15924 2871 aaKnown RBP2.03□□□□□ -2.08
CSDE1-216ENST00000534389 TRGV1A0A0A0MS02 117 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 ETDCA0A1B0GVM5 59 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 LY6EQ16553 131 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 DEFB114Q30KQ6 69 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 Q8IZM0 81 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 CDC42SE1Q9NRR8 79 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 PRUNE2Q8WUY3 3088 aa2.03□□□□□ -2.08
CSDE1-216ENST00000534389 TPRP12270 2363 aaKnown RBP2.02□□□□□ -2.09
CSDE1-216ENST00000534389 CDH23Q9H251 3354 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 A0A1W2PNM2 257 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 SPINK7P58062 85 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 ELOF1P60002 83 aaKnown RBP2.02□□□□□ -2.09
CSDE1-216ENST00000534389 UNQ6190/PRO20217Q6UXQ8 127 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 BRD3OSQ6XYD6 125 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 B9D2Q9BPU9 175 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 Q9BRP9 147 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 LIMD2Q9BT23 127 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 ZFHX3Q15911 3703 aa2.02□□□□□ -2.09
CSDE1-216ENST00000534389 MGAQ8IWI9 3026 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 APC2O95996 2303 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 WDFY4Q6ZS81 3184 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 A6NED7 52 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 C3orf84H3BNL1 204 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 H3BQ85 93 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 GIG44P09565 113 aaPredicted RBP2.01□□□□□ -2.09
CSDE1-216ENST00000534389 LINC00313P59037 77 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 CLPSL2Q6UWE3 100 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 LINC00208Q96KT6 92 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 NCOR1O75376 2440 aa2.01□□□□□ -2.09
CSDE1-216ENST00000534389 CACNA1HO95180 2353 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 KALRNO60229 2985 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 COL6A6A6NMZ7 2263 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 B4DSR2 109 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 H3BUX3 64 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 K7EQZ3 153 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 INSP01308 110 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 COX17Q14061 63 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 KPRPQ5T749 579 aaPredicted RBP2□□□□□ -2.09
CSDE1-216ENST00000534389 Q6ZR54 194 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 COA5Q86WW8 74 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 C9orf163Q8N9P6 203 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 KCNQ1DNQ9H478 68 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 NOP10Q9NPE3 64 aaKnown RBP2□□□□□ -2.09
CSDE1-216ENST00000534389 LINC01558Q9Y6Z2 57 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 C2CD3Q4AC94 2353 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms