RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TRGV1A0A0A0MS02 117 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 TRAV4A0A0B4J268 109 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 IGHV1-24A0A0C4DH33 117 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 TRBV27A0A0K0K1C4 114 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 C11orf86A6NJI1 115 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 SYS1-DBNDD2H3BUS1 97 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 M0QY20 66 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 NUPR1O60356 82 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 NPYP01303 97 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 MGPP08493 103 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 C3orf79P0CE67 100 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 FXYD7P58549 80 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 PKIAP61925 76 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 ZNF56Q15929 161 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 PYY3Q5JQD4 70 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 FAM74A4Q5TZK3 123 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 C2orf91Q6ZV80 131 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 C1orf158Q8N1D5 194 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 FAM19A2Q8N3H0 131 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 IFI27L1Q96BM0 104 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 PRADC1Q9BSG0 188 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 CYSLTR1Q9Y271 337 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 AKAP9Q99996 3911 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 ZFHX3Q15911 3703 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 TRBV7-3A0A075B6L6 115 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 TRAV26-2A0A0B4J265 109 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 I3L3M4 83 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 NCR2O95944 276 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 SPART-AS1P0CW21 52 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 MIFP14174 115 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 PLNP26678 52 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 CRYBA4P53673 196 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 POLR2KP53803 58 aaKnown RBP1.59□□□□□ -2.15
SKP1-212ENST00000523966 SS18Q15532 418 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 TMEM97Q5BJF2 176 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 LINC01545Q5VT33 79 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 CFAP126Q5VTH2 177 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 TOMM6Q96B49 74 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 TMEM141Q96I45 108 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 SCGB3A1Q96QR1 104 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 Q9BRP9 147 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 VAMP8Q9BV40 100 aa1.59□□□□□ -2.15
SKP1-212ENST00000523966 NOP10Q9NPE3 64 aaKnown RBP1.59□□□□□ -2.15
SKP1-212ENST00000523966 TENM1Q9UKZ4 2725 aa1.59□□□□□ -2.16
SKP1-212ENST00000523966 NBEAL2Q6ZNJ1 2754 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 A0A087WX48 190 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 TRAV12-1A0A0B4J245 112 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 TRBV6-4A0A1B0GX49 114 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 F8VRH5 84 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 J3QQQ9 107 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 DPM2O94777 84 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 DDTP30046 118 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 XCL1P47992 114 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 SEC11AP67812 179 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 Q6ZTI0 123 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 DAND5Q8N907 189 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 RPL39LQ96EH5 51 aaKnown RBP1.58□□□□□ -2.16
SKP1-212ENST00000523966 PMCHL2Q9BQD1 86 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 TIMM21Q9BVV7 248 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 WFDC10AQ9H1F0 79 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 SPANXA1Q9NS26 97 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 UQCR10Q9UDW1 63 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 HHLA3Q9XRX5 114 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 VWFP04275 2813 aa1.58□□□□□ -2.16
SKP1-212ENST00000523966 NBEAL1Q6ZS30 2694 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 TRBV25-1A0A075B6N4 114 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 IGIPA6NJ69 53 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 H3BNG1 76 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 DLEU1O43261 78 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 IGKCP01834 107 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 PRM2P04554 102 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 DEFB130BP0DP73 79 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 DEFB130AP0DP74 79 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 ZNF25P17030 456 aaPredicted RBP1.57□□□□□ -2.16
SKP1-212ENST00000523966 EMP1P54849 157 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 MRPS36P82909 103 aaKnown RBP1.57□□□□□ -2.16
SKP1-212ENST00000523966 DEFB135Q30KP9 77 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 SPATA45Q537H7 98 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 C2orf88Q9BSF0 95 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 C11orf68Q9H3H3 251 aaKnown RBP1.57□□□□□ -2.16
SKP1-212ENST00000523966 CST9LQ9H4G1 147 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 PRO0255Q9UI72 69 aa1.57□□□□□ -2.16
SKP1-212ENST00000523966 TRBV6-8A0A0A6YYG3 113 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 H3BRM9 83 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 M0R143 59 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 CCL25O15444 150 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 IGLC3P0DOY3 106 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 COX8AP10176 69 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 UBE2D3P61077 147 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 UBE2D2P62837 147 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 ATOH7Q8N100 152 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 OR5A1Q8NGJ0 315 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 ATP6V0E2Q8NHE4 81 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 PLEKHB2Q96CS7 222 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 C14orf144Q96I85 54 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 AMELXQ99217 191 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 PRO1933Q9H354 126 aa1.56□□□□□ -2.16
SKP1-212ENST00000523966 MRPL35Q9NZE8 188 aaKnown RBP1.56□□□□□ -2.16
SKP1-212ENST00000523966 TRRAPQ9Y4A5 3859 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms