RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 RPL39P62891 51 aaKnown RBP8.76□□□□□ -1.01
LIN54-210ENST00000510877 UBE2D1P51668 147 aa8.76□□□□□ -1.01
LIN54-210ENST00000510877 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
LIN54-210ENST00000510877 A0A087WZ39 114 aa8.75□□□□□ -1.01
LIN54-210ENST00000510877 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
LIN54-210ENST00000510877 PDZD2O15018 2839 aa8.75□□□□□ -1.01
LIN54-210ENST00000510877 TRBV7-7A0A0K0K1E9 115 aa8.75□□□□□ -1.01
LIN54-210ENST00000510877 ENHOQ6UWT2 76 aa8.75□□□□□ -1.01
LIN54-210ENST00000510877 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
LIN54-210ENST00000510877 CHCHD10Q8WYQ3 142 aaPredicted RBP8.75□□□□□ -1.01
LIN54-210ENST00000510877 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
LIN54-210ENST00000510877 PLA2G1BP04054 148 aaKnown RBP8.74□□□□□ -1.01
LIN54-210ENST00000510877 H7C423 109 aa8.73□□□□□ -1.01
LIN54-210ENST00000510877 LINC00474Q9P2X8 69 aa8.73□□□□□ -1.01
LIN54-210ENST00000510877 TMEM223A0PJW6 202 aa8.73□□□□□ -1.01
LIN54-210ENST00000510877 PIK3CD-AS1Q5SR53 167 aa8.73□□□□□ -1.01
LIN54-210ENST00000510877 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
LIN54-210ENST00000510877 PMAIP1Q13794 54 aa8.72□□□□□ -1.01
LIN54-210ENST00000510877 UBE2AP49459 152 aa8.72□□□□□ -1.01
LIN54-210ENST00000510877 C9orf85Q96MD7 179 aa8.72□□□□□ -1.01
LIN54-210ENST00000510877 SMG1Q96Q15 3661 aaKnown RBP8.71□□□□□ -1.01
LIN54-210ENST00000510877 NDUFB1O75438 58 aa8.71□□□□□ -1.01
LIN54-210ENST00000510877 IGLV2-11P01706 119 aa8.71□□□□□ -1.01
LIN54-210ENST00000510877 CRYGAP11844 174 aa8.71□□□□□ -1.01
LIN54-210ENST00000510877 ZFHX3Q15911 3703 aa8.71□□□□□ -1.02
LIN54-210ENST00000510877 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.02
LIN54-210ENST00000510877 URB1-AS1Q96HZ7 61 aa8.7□□□□□ -1.02
LIN54-210ENST00000510877 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
LIN54-210ENST00000510877 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
LIN54-210ENST00000510877 BPY2O14599 106 aa8.7□□□□□ -1.02
LIN54-210ENST00000510877 FAM19A3Q7Z5A8 133 aa8.7□□□□□ -1.02
LIN54-210ENST00000510877 MIR7-3HGQ8N6C7 128 aa8.69□□□□□ -1.02
LIN54-210ENST00000510877 LINC00308Q8TCZ7 52 aa8.68□□□□□ -1.02
LIN54-210ENST00000510877 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
LIN54-210ENST00000510877 RNF185Q96GF1 192 aa8.67□□□□□ -1.02
LIN54-210ENST00000510877 EPM2AB3EWF7 344 aa8.67□□□□□ -1.02
LIN54-210ENST00000510877 SNURFQ9Y675 71 aa8.67□□□□□ -1.02
LIN54-210ENST00000510877 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
LIN54-210ENST00000510877 A6NED7 52 aa8.66□□□□□ -1.02
LIN54-210ENST00000510877 RTL8CO15255 209 aa8.65□□□□□ -1.02
LIN54-210ENST00000510877 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.02
LIN54-210ENST00000510877 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.03
LIN54-210ENST00000510877 HRNRQ86YZ3 2850 aaPredicted RBP8.64□□□□□ -1.03
LIN54-210ENST00000510877 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
LIN54-210ENST00000510877 M0QY20 66 aa8.63□□□□□ -1.03
LIN54-210ENST00000510877 PYGO1Q9Y3Y4 419 aa8.63□□□□□ -1.03
LIN54-210ENST00000510877 NCR3O14931 201 aa8.62□□□□□ -1.03
LIN54-210ENST00000510877 GIG44P09565 113 aaPredicted RBP8.62□□□□□ -1.03
LIN54-210ENST00000510877 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
LIN54-210ENST00000510877 Q6ZSN1 163 aa8.62□□□□□ -1.03
LIN54-210ENST00000510877 F8WDY8 70 aa8.62□□□□□ -1.03
LIN54-210ENST00000510877 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
LIN54-210ENST00000510877 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 IBA57-AS1B1ANH7 110 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
LIN54-210ENST00000510877 CRIP1P50238 77 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 NBEAL2Q6ZNJ1 2754 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 IGLV4-3A0A075B6K6 122 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 NRACQ8N912 160 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 VPREB1P12018 145 aa8.61□□□□□ -1.03
LIN54-210ENST00000510877 TRBV6-5A0A0K0K1A5 114 aa8.6□□□□□ -1.03
LIN54-210ENST00000510877 BCE1O60756 84 aa8.6□□□□□ -1.03
LIN54-210ENST00000510877 NDUFS5O43920 106 aa8.6□□□□□ -1.03
LIN54-210ENST00000510877 CD164L2Q6UWJ8 174 aa8.6□□□□□ -1.03
LIN54-210ENST00000510877 CCKP06307 115 aa8.59□□□□□ -1.03
LIN54-210ENST00000510877 COX6A2Q02221 97 aa8.59□□□□□ -1.03
LIN54-210ENST00000510877 TNP2Q05952 138 aa8.59□□□□□ -1.03
LIN54-210ENST00000510877 SOSTDC1Q6X4U4 206 aa8.58□□□□□ -1.04
LIN54-210ENST00000510877 CDKN2A-AS1Q9UH64 79 aa8.58□□□□□ -1.04
LIN54-210ENST00000510877 C4orf26Q17RF5 130 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 TRBV7-6A0A0J9YX20 115 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 COX7BP24311 80 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 NBPF19A0A087WUL8 3843 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 FBN3Q75N90 2809 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
LIN54-210ENST00000510877 A0A087WTM6 91 aa8.56□□□□□ -1.04
LIN54-210ENST00000510877 DEFB105AQ8NG35 78 aa8.56□□□□□ -1.04
LIN54-210ENST00000510877 A0A096LNJ9 63 aa8.55□□□□□ -1.04
LIN54-210ENST00000510877 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
LIN54-210ENST00000510877 A0A087WVE0 104 aa8.54□□□□□ -1.04
LIN54-210ENST00000510877 PRYO14603 147 aa8.54□□□□□ -1.04
LIN54-210ENST00000510877 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
LIN54-210ENST00000510877 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
LIN54-210ENST00000510877 HIGD2AQ9BW72 106 aa8.53□□□□□ -1.04
LIN54-210ENST00000510877 SLPIP03973 132 aa8.53□□□□□ -1.04
LIN54-210ENST00000510877 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
LIN54-210ENST00000510877 ZNF575Q86XF7 245 aa8.53□□□□□ -1.04
LIN54-210ENST00000510877 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
LIN54-210ENST00000510877 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.05
LIN54-210ENST00000510877 A8MTW9 85 aa8.52□□□□□ -1.05
LIN54-210ENST00000510877 SCXQ7RTU7 201 aa8.52□□□□□ -1.05
LIN54-210ENST00000510877 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
LIN54-210ENST00000510877 IGIPA6NJ69 53 aa8.51□□□□□ -1.05
LIN54-210ENST00000510877 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
LIN54-210ENST00000510877 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
LIN54-210ENST00000510877 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms