RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 URB1O60287 2271 aaKnown RBP0.7□□□□□ -2.3
OTUD4-208ENST00000509620 SMIM13P0DJ93 91 aa0.7□□□□□ -2.3
OTUD4-208ENST00000509620 SPRR1AP35321 89 aa0.7□□□□□ -2.3
OTUD4-208ENST00000509620 RPL38P63173 70 aaKnown RBP0.7□□□□□ -2.3
OTUD4-208ENST00000509620 TMEM131LA2VDJ0 1609 aa0.7□□□□□ -2.3
OTUD4-208ENST00000509620 ALKQ9UM73 1620 aa0.7□□□□□ -2.3
OTUD4-208ENST00000509620 ABCC1P33527 1531 aa0.69□□□□□ -2.3
OTUD4-208ENST00000509620 DEFB109BQ30KR1 87 aa0.69□□□□□ -2.3
OTUD4-208ENST00000509620 ATP5EP2Q5VTU8 51 aa0.69□□□□□ -2.3
OTUD4-208ENST00000509620 ABCA12Q86UK0 2595 aa0.69□□□□□ -2.3
OTUD4-208ENST00000509620 C2CD3Q4AC94 2353 aa0.69□□□□□ -2.3
OTUD4-208ENST00000509620 URB2Q14146 1524 aaKnown RBP0.69□□□□□ -2.3
OTUD4-208ENST00000509620 SPTBN2O15020 2390 aa0.68□□□□□ -2.3
OTUD4-208ENST00000509620 BDP1A6H8Y1 2624 aa0.68□□□□□ -2.3
OTUD4-208ENST00000509620 ANKARQ7Z5J8 1434 aa0.68□□□□□ -2.3
OTUD4-208ENST00000509620 LRRC7Q96NW7 1537 aa0.68□□□□□ -2.3
OTUD4-208ENST00000509620 RGPD2P0DJD1 1756 aa0.68□□□□□ -2.3
OTUD4-208ENST00000509620 ANKRD17O75179 2603 aaKnown RBP0.68□□□□□ -2.3
OTUD4-208ENST00000509620 CHD9Q3L8U1 2897 aa0.67□□□□□ -2.3
OTUD4-208ENST00000509620 F8P00451 2351 aa0.67□□□□□ -2.3
OTUD4-208ENST00000509620 UMAD1C9J7I0 102 aa0.67□□□□□ -2.3
OTUD4-208ENST00000509620 FXYD6Q9H0Q3 95 aa0.67□□□□□ -2.3
OTUD4-208ENST00000509620 APLNQ9ULZ1 77 aa0.67□□□□□ -2.3
OTUD4-208ENST00000509620 NKTRP30414 1462 aaKnown RBP0.67□□□□□ -2.3
OTUD4-208ENST00000509620 FMN2Q9NZ56 1722 aa0.67□□□□□ -2.3
OTUD4-208ENST00000509620 CLIP1P30622 1438 aa0.66□□□□□ -2.3
OTUD4-208ENST00000509620 COL14A1Q05707 1796 aaKnown RBP0.66□□□□□ -2.3
OTUD4-208ENST00000509620 SPINK4O60575 86 aa0.66□□□□□ -2.3
OTUD4-208ENST00000509620 IFI27P40305 119 aaPredicted RBP0.66□□□□□ -2.3
OTUD4-208ENST00000509620 DEFB105AQ8NG35 78 aa0.66□□□□□ -2.3
OTUD4-208ENST00000509620 MRPL34Q9BQ48 92 aaKnown RBP0.66□□□□□ -2.3
OTUD4-208ENST00000509620 SMCO4Q9NRQ5 59 aa0.66□□□□□ -2.3
OTUD4-208ENST00000509620 NCOA2Q15596 1464 aa0.66□□□□□ -2.3
OTUD4-208ENST00000509620 POLQO75417 2590 aa0.65□□□□□ -2.3
OTUD4-208ENST00000509620 RGPD1P0DJD0 1748 aa0.65□□□□□ -2.31
OTUD4-208ENST00000509620 CCL22O00626 93 aa0.65□□□□□ -2.31
OTUD4-208ENST00000509620 IFI6P09912 130 aa0.65□□□□□ -2.31
OTUD4-208ENST00000509620 TPRP12270 2363 aaKnown RBP0.65□□□□□ -2.31
OTUD4-208ENST00000509620 CACNA1EQ15878 2313 aa0.65□□□□□ -2.31
OTUD4-208ENST00000509620 TSC2P49815 1807 aa0.64□□□□□ -2.31
OTUD4-208ENST00000509620 ZNF292O60281 2723 aa0.64□□□□□ -2.31
OTUD4-208ENST00000509620 PDCD5O14737 125 aa0.64□□□□□ -2.31
OTUD4-208ENST00000509620 U3KQA8 63 aa0.64□□□□□ -2.31
OTUD4-208ENST00000509620 PPRC1Q5VV67 1664 aaKnown RBP0.64□□□□□ -2.31
OTUD4-208ENST00000509620 PTPRQQ9UMZ3 2332 aa0.64□□□□□ -2.31
OTUD4-208ENST00000509620 FRAS1Q86XX4 4008 aa0.63□□□□□ -2.31
OTUD4-208ENST00000509620 CFAP74Q9C0B2 1584 aa0.63□□□□□ -2.31
OTUD4-208ENST00000509620 DEFA5Q01523 94 aa0.62□□□□□ -2.31
OTUD4-208ENST00000509620 HEPN1Q6WQI6 88 aa0.62□□□□□ -2.31
OTUD4-208ENST00000509620 MAP3K1Q13233 1512 aa0.62□□□□□ -2.31
OTUD4-208ENST00000509620 PIK3C2BO00750 1634 aa0.61□□□□□ -2.31
OTUD4-208ENST00000509620 PTPN23Q9H3S7 1636 aa0.61□□□□□ -2.31
OTUD4-208ENST00000509620 RGPD8O14715 1765 aaPredicted RBP0.61□□□□□ -2.31
OTUD4-208ENST00000509620 LTN1O94822 1766 aa0.61□□□□□ -2.31
OTUD4-208ENST00000509620 RGPD5Q99666 1765 aa0.61□□□□□ -2.31
OTUD4-208ENST00000509620 KLK9Q2XQG4 91 aa0.61□□□□□ -2.31
OTUD4-208ENST00000509620 PTPRZ1P23471 2315 aaPredicted RBP0.61□□□□□ -2.31
OTUD4-208ENST00000509620 QSER1Q2KHR3 1735 aa0.61□□□□□ -2.31
OTUD4-208ENST00000509620 PIEZO2Q9H5I5 2752 aa0.6□□□□□ -2.31
OTUD4-208ENST00000509620 HMGA1P17096 107 aaKnown RBP0.6□□□□□ -2.31
OTUD4-208ENST00000509620 NREPQ16612 68 aa0.6□□□□□ -2.31
OTUD4-208ENST00000509620 CDKN2A-AS1Q9UH64 79 aa0.6□□□□□ -2.31
OTUD4-208ENST00000509620 USP32Q8NFA0 1604 aa0.6□□□□□ -2.31
OTUD4-208ENST00000509620 H1FX-AS1Q4G0G2 97 aa0.59□□□□□ -2.31
OTUD4-208ENST00000509620 PKDREJQ9NTG1 2253 aa0.59□□□□□ -2.32
OTUD4-208ENST00000509620 OTOGQ6ZRI0 2925 aa0.58□□□□□ -2.32
OTUD4-208ENST00000509620 BCORQ6W2J9 1755 aa0.58□□□□□ -2.32
OTUD4-208ENST00000509620 H3BVH4 76 aa0.58□□□□□ -2.32
OTUD4-208ENST00000509620 COX6B2Q6YFQ2 88 aa0.58□□□□□ -2.32
OTUD4-208ENST00000509620 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
OTUD4-208ENST00000509620 ABCA8O94911 1581 aa0.57□□□□□ -2.32
OTUD4-208ENST00000509620 CEP170BQ9Y4F5 1589 aaPredicted RBP0.57□□□□□ -2.32
OTUD4-208ENST00000509620 ZNF831Q5JPB2 1677 aa0.56□□□□□ -2.32
OTUD4-208ENST00000509620 POLR1AO95602 1720 aaPredicted RBP0.56□□□□□ -2.32
OTUD4-208ENST00000509620 MAGI3Q5TCQ9 1506 aa0.56□□□□□ -2.32
OTUD4-208ENST00000509620 LCE6AA0A183 80 aa0.56□□□□□ -2.32
OTUD4-208ENST00000509620 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
OTUD4-208ENST00000509620 ARFGEF2Q9Y6D5 1785 aa0.55□□□□□ -2.32
OTUD4-208ENST00000509620 UGGT2Q9NYU1 1516 aa0.54□□□□□ -2.32
OTUD4-208ENST00000509620 AKAP6Q13023 2319 aa0.54□□□□□ -2.32
OTUD4-208ENST00000509620 SPTBN1Q01082 2364 aaKnown RBP0.54□□□□□ -2.32
OTUD4-208ENST00000509620 NDUFA4O00483 81 aa0.54□□□□□ -2.32
OTUD4-208ENST00000509620 NDUFA3O95167 84 aa0.54□□□□□ -2.32
OTUD4-208ENST00000509620 DOT1LQ8TEK3 1739 aa0.54□□□□□ -2.32
OTUD4-208ENST00000509620 CCDC88BA6NC98 1476 aa0.54□□□□□ -2.32
OTUD4-208ENST00000509620 DUOX2Q9NRD8 1548 aa0.54□□□□□ -2.32
OTUD4-208ENST00000509620 LRRIQ1Q96JM4 1722 aa0.53□□□□□ -2.32
OTUD4-208ENST00000509620 PIEZO1Q92508 2521 aa0.53□□□□□ -2.32
OTUD4-208ENST00000509620 WFDC13Q8IUB5 93 aa0.53□□□□□ -2.32
OTUD4-208ENST00000509620 ANKRD50Q9ULJ7 1429 aa0.53□□□□□ -2.32
OTUD4-208ENST00000509620 PREX1Q8TCU6 1659 aa0.53□□□□□ -2.33
OTUD4-208ENST00000509620 IGF2RP11717 2491 aa0.52□□□□□ -2.33
OTUD4-208ENST00000509620 LELP1Q5T871 98 aa0.52□□□□□ -2.33
OTUD4-208ENST00000509620 TIAM2Q8IVF5 1701 aa0.52□□□□□ -2.33
OTUD4-208ENST00000509620 LOC730098B7Z3J9 87 aa0.51□□□□□ -2.33
OTUD4-208ENST00000509620 NWD1Q149M9 1564 aa0.51□□□□□ -2.33
OTUD4-208ENST00000509620 MYO5CQ9NQX4 1742 aa0.51□□□□□ -2.33
OTUD4-208ENST00000509620 CD163L1Q9NR16 1453 aa0.51□□□□□ -2.33
OTUD4-208ENST00000509620 SCN11AQ9UI33 1791 aa0.51□□□□□ -2.33
OTUD4-208ENST00000509620 TENM4Q6N022 2769 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms