RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 CRYBG1Q9Y4K1 1723 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 TRBV7-4A0A0J9YYF1 115 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 A0A1B0GU69 56 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 LINC00959A0A1B0GUT2 108 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 PDCD5O14737 125 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 FAM103A1Q9BTL3 118 aaKnown RBP0.57□□□□□ -2.32
XRCC4-204ENST00000509268 SLIT1O75093 1534 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 ABCC1P33527 1531 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 C2CD3Q4AC94 2353 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 ATP7BP35670 1465 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 LRRC9Q6ZRR7 1453 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 MEGF8Q7Z7M0 2845 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 A0A1B0GUT8 65 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 SAMD9Q5K651 1589 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 NEBP20929 6669 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 XRN1Q8IZH2 1706 aaKnown RBP0.56□□□□□ -2.32
XRCC4-204ENST00000509268 ZANQ9Y493 2812 aa0.56□□□□□ -2.32
XRCC4-204ENST00000509268 TULP4Q9NRJ4 1543 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 C5P01031 1676 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 PPRC1Q5VV67 1664 aaKnown RBP0.55□□□□□ -2.32
XRCC4-204ENST00000509268 I3L2K1 104 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 SMIM13P0DJ93 91 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 ADAMTS12P58397 1594 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 ZNF292O60281 2723 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 KIF20BQ96Q89 1820 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 UGGT2Q9NYU1 1516 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 NBEAL2Q6ZNJ1 2754 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 IQGAP3Q86VI3 1631 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 PTPN23Q9H3S7 1636 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 ALKQ9UM73 1620 aa0.55□□□□□ -2.32
XRCC4-204ENST00000509268 RYR1P21817 5038 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 S100A3P33764 101 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 HEPN1Q6WQI6 88 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 ZNF831Q5JPB2 1677 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 LTN1O94822 1766 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 CACNA1HO95180 2353 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 CCDC141Q6ZP82 1450 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 RGPD1P0DJD0 1748 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 THOC2Q8NI27 1593 aaKnown RBP0.54□□□□□ -2.32
XRCC4-204ENST00000509268 CEP170BQ9Y4F5 1589 aaPredicted RBP0.54□□□□□ -2.32
XRCC4-204ENST00000509268 SPG11Q96JI7 2443 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 ANKRD36A6QL64 1941 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 ZC3H13Q5T200 1668 aaKnown RBP0.54□□□□□ -2.32
XRCC4-204ENST00000509268 RYR2Q92736 4967 aa0.54□□□□□ -2.32
XRCC4-204ENST00000509268 RGPD2P0DJD1 1756 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 ERICH3Q5RHP9 1530 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 TRAV21A0A0B4J279 112 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 PRB3Q04118 309 aaPredicted RBP0.53□□□□□ -2.32
XRCC4-204ENST00000509268 DEFB112Q30KQ8 113 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 TP53AIP1Q9HCN2 124 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 SSPOA2VEC9 5147 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 MYO5CQ9NQX4 1742 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 SETBP1Q9Y6X0 1596 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 ARFGEF2Q9Y6D5 1785 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 CLIP1P30622 1438 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 HIVEP3Q5T1R4 2406 aa0.53□□□□□ -2.32
XRCC4-204ENST00000509268 ZFYVE26Q68DK2 2539 aa0.53□□□□□ -2.33
XRCC4-204ENST00000509268 USP32Q8NFA0 1604 aa0.53□□□□□ -2.33
XRCC4-204ENST00000509268 MADDQ8WXG6 1647 aa0.53□□□□□ -2.33
XRCC4-204ENST00000509268 ITSN1Q15811 1721 aa0.53□□□□□ -2.33
XRCC4-204ENST00000509268 SMIM31A0A1B0GVY4 71 aa0.53□□□□□ -2.33
XRCC4-204ENST00000509268 IFI6P09912 130 aa0.53□□□□□ -2.33
XRCC4-204ENST00000509268 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.33
XRCC4-204ENST00000509268 KIF1AQ12756 1690 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 SONP18583 2426 aaKnown RBP0.52□□□□□ -2.33
XRCC4-204ENST00000509268 A0A0G2JMZ2 1700 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 PDE4DIPQ5VU43 2346 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 PLCE1Q9P212 2302 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 A0A087WXM4 84 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 A0A0D9SFI3 127 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 UMAD1C9J7I0 102 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 HMGA1P17096 107 aaKnown RBP0.52□□□□□ -2.33
XRCC4-204ENST00000509268 IFI27P40305 119 aaPredicted RBP0.52□□□□□ -2.33
XRCC4-204ENST00000509268 ATP5EP2Q5VTU8 51 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 DEFB123Q8N688 67 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 GAFA1Q96PS6 74 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 CNFNQ9BYD5 112 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 CRIPTQ9P021 101 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 CD163L1Q9NR16 1453 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 RGPD8O14715 1765 aaPredicted RBP0.52□□□□□ -2.33
XRCC4-204ENST00000509268 RGPD5Q99666 1765 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 ACACBO00763 2458 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 POLQO75417 2590 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 PIEZO2Q9H5I5 2752 aa0.52□□□□□ -2.33
XRCC4-204ENST00000509268 PIK3C2BO00750 1634 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 PAPPAQ13219 1627 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 URB2Q14146 1524 aaKnown RBP0.51□□□□□ -2.33
XRCC4-204ENST00000509268 LRRC7Q96NW7 1537 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 DUOX2Q9NRD8 1548 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 URB1O60287 2271 aaKnown RBP0.51□□□□□ -2.33
XRCC4-204ENST00000509268 NKTRP30414 1462 aaKnown RBP0.51□□□□□ -2.33
XRCC4-204ENST00000509268 COX6A2Q02221 97 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 PRO0255Q9UI72 69 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 KIAA0556O60303 1618 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 MYO9AB2RTY4 2548 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 A0A0C4DFX4 3053 aa0.51□□□□□ -2.33
XRCC4-204ENST00000509268 USP9YO00507 2555 aaPredicted RBP0.51□□□□□ -2.33
XRCC4-204ENST00000509268 SPTBN2O15020 2390 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
XRCC4-204ENST00000509268 PKD1L3Q7Z443 1732 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms