RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 PIPP12273 146 aaPredicted RBP1.3□□□□□ -2.2
CMSS1-207ENST00000494412 MEIG1Q5JSS6 88 aa1.3□□□□□ -2.2
CMSS1-207ENST00000494412 RPL7L1Q6DKI1 246 aaKnown RBP1.3□□□□□ -2.2
CMSS1-207ENST00000494412 Q8N6K4 173 aa1.3□□□□□ -2.2
CMSS1-207ENST00000494412 TSKUQ8WUA8 353 aa1.3□□□□□ -2.2
CMSS1-207ENST00000494412 HSPG2P98160 4391 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 FAT2Q9NYQ8 4349 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 TCRBV3S1A0A5B6 114 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 A6NIN4 97 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 K7EIL1 84 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 DLEU1O43261 78 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 UBA52P62987 128 aaKnown RBP1.29□□□□□ -2.2
CMSS1-207ENST00000494412 ZNF56Q15929 161 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 SLC48A1Q6P1K1 146 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 NDUFA11Q86Y39 141 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 COPS9Q8WXC6 57 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 TMEM141Q96I45 108 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 SEC11CQ9BY50 192 aa1.29□□□□□ -2.2
CMSS1-207ENST00000494412 HUWE1Q7Z6Z7 4374 aaKnown RBP1.29□□□□□ -2.2
CMSS1-207ENST00000494412 DNAH11Q96DT5 4516 aa1.28□□□□□ -2.2
CMSS1-207ENST00000494412 TEX49A0A1B0GTD5 131 aa1.28□□□□□ -2.2
CMSS1-207ENST00000494412 DEFB108AA8MXU0 73 aa1.28□□□□□ -2.2
CMSS1-207ENST00000494412 NDUFB6O95139 128 aa1.28□□□□□ -2.2
CMSS1-207ENST00000494412 UBE2G1P62253 170 aa1.28□□□□□ -2.2
CMSS1-207ENST00000494412 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.28□□□□□ -2.2
CMSS1-207ENST00000494412 ANKRD36A6QL64 1941 aa1.28□□□□□ -2.2
CMSS1-207ENST00000494412 DYNC1H1Q14204 4646 aaKnown RBP1.28□□□□□ -2.21
CMSS1-207ENST00000494412 APOBP04114 4563 aaKnown RBP1.27□□□□□ -2.21
CMSS1-207ENST00000494412 A0A0D9SFI3 127 aa1.27□□□□□ -2.21
CMSS1-207ENST00000494412 A0A1W2PPM0 123 aa1.27□□□□□ -2.21
CMSS1-207ENST00000494412 LY6G6CO95867 125 aa1.27□□□□□ -2.21
CMSS1-207ENST00000494412 S100A7L2Q5SY68 101 aa1.27□□□□□ -2.21
CMSS1-207ENST00000494412 CYP2G1PQ6ZSU1 146 aa1.27□□□□□ -2.21
CMSS1-207ENST00000494412 AGPAT4-IT1Q9H0P7 198 aa1.27□□□□□ -2.21
CMSS1-207ENST00000494412 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
CMSS1-207ENST00000494412 TRAV12-3A0A0B4J271 114 aa1.26□□□□□ -2.21
CMSS1-207ENST00000494412 LOC100130705A0A1B0GUX0 176 aa1.26□□□□□ -2.21
CMSS1-207ENST00000494412 NPC2P61916 151 aa1.26□□□□□ -2.21
CMSS1-207ENST00000494412 C9orf116Q5BN46 136 aaPredicted RBP1.26□□□□□ -2.21
CMSS1-207ENST00000494412 SNRNP25Q9BV90 132 aaKnown RBP1.26□□□□□ -2.21
CMSS1-207ENST00000494412 RPRMQ9NS64 109 aa1.26□□□□□ -2.21
CMSS1-207ENST00000494412 LINC00587B1AMM8 73 aa1.25□□□□□ -2.21
CMSS1-207ENST00000494412 DCDP81605 110 aaKnown RBP1.25□□□□□ -2.21
CMSS1-207ENST00000494412 RERGLQ9H628 205 aa1.25□□□□□ -2.21
CMSS1-207ENST00000494412 COA4Q9NYJ1 87 aa1.25□□□□□ -2.21
CMSS1-207ENST00000494412 AKAIN1P0CW23 69 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 FGF7P21781 194 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 DEFB110Q30KQ9 67 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 SPTSSBQ8NFR3 76 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 PPP1R1CQ8WVI7 109 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 C2orf88Q9BSF0 95 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 NAA60Q9H7X0 242 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 DNAH2Q9P225 4427 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 LRP2P98164 4655 aa1.24□□□□□ -2.21
CMSS1-207ENST00000494412 DNAH6Q9C0G6 4158 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 CLPSL1A2RUU4 121 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 CBLN1P23435 193 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 KLKP1Q107X0 134 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 C10orf99Q6UWK7 81 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 C10orf82Q8WW14 230 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 BPESC1Q9GZL8 116 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 BET1LQ9NYM9 111 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 SERP1Q9Y6X1 66 aa1.23□□□□□ -2.21
CMSS1-207ENST00000494412 DNAH5Q8TE73 4624 aa1.22□□□□□ -2.21
CMSS1-207ENST00000494412 FAT1Q14517 4588 aa1.22□□□□□ -2.21
CMSS1-207ENST00000494412 VPS13BQ7Z7G8 4022 aa1.22□□□□□ -2.21
CMSS1-207ENST00000494412 ASIPP42127 132 aa1.22□□□□□ -2.21
CMSS1-207ENST00000494412 C20orf197Q8N268 126 aa1.22□□□□□ -2.21
CMSS1-207ENST00000494412 LSM10Q969L4 123 aaKnown RBP1.22□□□□□ -2.21
CMSS1-207ENST00000494412 TMEM14BQ9NUH8 114 aa1.22□□□□□ -2.21
CMSS1-207ENST00000494412 FAIMQ9NVQ4 179 aa1.22□□□□□ -2.21
CMSS1-207ENST00000494412 MCRIP1C9JLW8 97 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 IFNA17P01571 189 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 SPINT3P49223 89 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 ELOF1P60002 83 aaKnown RBP1.21□□□□□ -2.22
CMSS1-207ENST00000494412 BTG2P78543 158 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 PP6455Q8WZ26 134 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 SCN3BQ9NY72 215 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 PKHD1L1Q86WI1 4243 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 LRP1BQ9NZR2 4599 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 PKD1P98161 4303 aa1.21□□□□□ -2.22
CMSS1-207ENST00000494412 VPS13DQ5THJ4 4388 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 UQCRHLA0A096LP55 91 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 SNAPC5O75971 98 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 Q56UQ5 140 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 Q6AWC8 147 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 TMEM203Q969S6 136 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 GNG8Q9UK08 70 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 DNAH17Q9UFH2 4485 aa1.2□□□□□ -2.22
CMSS1-207ENST00000494412 RBAKDNA6NC62 111 aa1.19□□□□□ -2.22
CMSS1-207ENST00000494412 MIF4GDA9UHW6 222 aaKnown RBP1.19□□□□□ -2.22
CMSS1-207ENST00000494412 CCL3L1P16619 93 aa1.19□□□□□ -2.22
CMSS1-207ENST00000494412 RBM3P98179 157 aaKnown RBP1.19□□□□□ -2.22
CMSS1-207ENST00000494412 SPINK13Q1W4C9 94 aa1.19□□□□□ -2.22
CMSS1-207ENST00000494412 LELP1Q5T871 98 aa1.19□□□□□ -2.22
CMSS1-207ENST00000494412 C4orf33Q8N1A6 199 aa1.19□□□□□ -2.22
CMSS1-207ENST00000494412 COX7B2Q8TF08 81 aa1.19□□□□□ -2.22
CMSS1-207ENST00000494412 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
CMSS1-207ENST00000494412 PIGBOS1A0A0B4J2F0 54 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms