RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FXYD6Q9H0Q3 95 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 CPS1P31327 1500 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 CDC42BPAQ5VT25 1732 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 A0A0D9SFI3 127 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 M0R2N4 97 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 FXYD4P59646 89 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 ATXN8Q156A1 80 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 GDF5OSQ5U4N7 250 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 DEFB107AQ8IZN7 70 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 LINC00846Q9NV44 126 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 QSER1Q2KHR3 1735 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 PLXNB2O15031 1838 aa1.43□□□□□ -2.18
SF3B1-210ENST00000482158 ANKRD50Q9ULJ7 1429 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 TRAV1-2A0A0B4J238 106 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 SNRPGP15A8MWD9 76 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 HMGA1P17096 107 aaKnown RBP1.42□□□□□ -2.18
SF3B1-210ENST00000482158 SPINK7P58062 85 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 LINC00472Q9H8W2 130 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 LRRC37A2A6NM11 1700 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 E9PCH4 1651 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 IQGAP1P46940 1657 aa1.42□□□□□ -2.18
SF3B1-210ENST00000482158 ZFHX3Q15911 3703 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 ATP7AQ04656 1500 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 DEPDC5O75140 1603 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 ABCA1O95477 2261 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 TRGV1A0A0A0MS02 117 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 A0A1B0GUT8 65 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 H0Y9P7 68 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 IFI6P09912 130 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 SPATA8Q6RVD6 105 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 SAMD9LQ8IVG5 1584 aa1.41□□□□□ -2.18
SF3B1-210ENST00000482158 COX17Q14061 63 aa1.4□□□□□ -2.19
SF3B1-210ENST00000482158 TMEM263Q8WUH6 116 aaKnown RBP1.4□□□□□ -2.19
SF3B1-210ENST00000482158 CACNA1BQ00975 2339 aa1.4□□□□□ -2.19
SF3B1-210ENST00000482158 F5P12259 2224 aa1.4□□□□□ -2.19
SF3B1-210ENST00000482158 SLIT1O75093 1534 aa1.4□□□□□ -2.19
SF3B1-210ENST00000482158 TECTAO75443 2155 aa1.4□□□□□ -2.19
SF3B1-210ENST00000482158 CADP27708 2225 aa1.39□□□□□ -2.19
SF3B1-210ENST00000482158 LINC01549A6NIU2 74 aa1.39□□□□□ -2.19
SF3B1-210ENST00000482158 FAM208AQ9UK61 1670 aaKnown RBP1.39□□□□□ -2.19
SF3B1-210ENST00000482158 TRAV21A0A0B4J279 112 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 ACYP2P14621 99 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 NREPQ16612 68 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 C10orf113Q5VZT2 155 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 Q6ZQY7 126 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 SMIM4Q8WVI0 70 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 EFCAB6Q5THR3 1501 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 ROS1P08922 2347 aa1.38□□□□□ -2.19
SF3B1-210ENST00000482158 LCE6AA0A183 80 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 NDUFB1O75438 58 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 CAV3P56539 151 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 CCL19Q99731 98 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 SSC5DA1L4H1 1573 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 NWD1Q149M9 1564 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 A0A0G2JMZ2 1700 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 TOGARAM1Q9Y4F4 1720 aa1.37□□□□□ -2.19
SF3B1-210ENST00000482158 TRPM2O94759 1503 aa1.36□□□□□ -2.19
SF3B1-210ENST00000482158 GCC2Q8IWJ2 1684 aa1.36□□□□□ -2.19
SF3B1-210ENST00000482158 TRBV30A0A0K0K1B3 111 aa1.36□□□□□ -2.19
SF3B1-210ENST00000482158 OBSCN-AS1Q96MR7 158 aa1.36□□□□□ -2.19
SF3B1-210ENST00000482158 TRBV6-1A0A0K0K1D8 114 aa1.35□□□□□ -2.19
SF3B1-210ENST00000482158 NCBP2-AS2Q69YL0 99 aa1.35□□□□□ -2.19
SF3B1-210ENST00000482158 WFDC9Q8NEX5 89 aa1.35□□□□□ -2.19
SF3B1-210ENST00000482158 G3V318 75 aa1.34□□□□□ -2.19
SF3B1-210ENST00000482158 DEFB112Q30KQ8 113 aa1.34□□□□□ -2.19
SF3B1-210ENST00000482158 C10orf99Q6UWK7 81 aa1.34□□□□□ -2.19
SF3B1-210ENST00000482158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.34□□□□□ -2.19
SF3B1-210ENST00000482158 LRRC37AA6NMS7 1700 aa1.34□□□□□ -2.2
SF3B1-210ENST00000482158 DDX60Q8IY21 1712 aaKnown RBP1.33□□□□□ -2.2
SF3B1-210ENST00000482158 A0A1B0GU69 56 aa1.33□□□□□ -2.2
SF3B1-210ENST00000482158 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
SF3B1-210ENST00000482158 ENHOQ6UWT2 76 aa1.33□□□□□ -2.2
SF3B1-210ENST00000482158 GAFA1Q96PS6 74 aa1.33□□□□□ -2.2
SF3B1-210ENST00000482158 TNCP24821 2201 aa1.32□□□□□ -2.2
SF3B1-210ENST00000482158 A0A096LNT2 108 aa1.32□□□□□ -2.2
SF3B1-210ENST00000482158 TOMM5Q8N4H5 51 aa1.32□□□□□ -2.2
SF3B1-210ENST00000482158 ASCC3Q8N3C0 2202 aaKnown RBP1.32□□□□□ -2.2
SF3B1-210ENST00000482158 GVQW2A0A096LPI5 108 aaPredicted RBP1.31□□□□□ -2.2
SF3B1-210ENST00000482158 K7EMI3 77 aa1.31□□□□□ -2.2
SF3B1-210ENST00000482158 FCER1GP30273 86 aa1.31□□□□□ -2.2
SF3B1-210ENST00000482158 Q6ZRX8 168 aa1.31□□□□□ -2.2
SF3B1-210ENST00000482158 SMIM11BQ8TCY0 68 aa1.31□□□□□ -2.2
SF3B1-210ENST00000482158 PLAC4Q8WY50 150 aa1.31□□□□□ -2.2
SF3B1-210ENST00000482158 PDE4DIPQ5VU43 2346 aa1.31□□□□□ -2.2
SF3B1-210ENST00000482158 CLTCL1P53675 1640 aa1.3□□□□□ -2.2
SF3B1-210ENST00000482158 URB1O60287 2271 aaKnown RBP1.3□□□□□ -2.2
SF3B1-210ENST00000482158 NCR3O14931 201 aa1.3□□□□□ -2.2
SF3B1-210ENST00000482158 COX7BP24311 80 aa1.3□□□□□ -2.2
SF3B1-210ENST00000482158 NMES1Q9C002 83 aa1.3□□□□□ -2.2
SF3B1-210ENST00000482158 NFAT5O94916 1531 aa1.3□□□□□ -2.2
SF3B1-210ENST00000482158 NDUFA4O00483 81 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 LY6G6CO95867 125 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 PRH1P02810 166 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 HAMPP81172 84 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 UBL5Q9BZL1 73 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 CMC2Q9NRP2 79 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 C4AP0C0L4 1744 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 EP400Q96L91 3159 aa1.29□□□□□ -2.2
SF3B1-210ENST00000482158 PRB3Q04118 309 aaPredicted RBP1.28□□□□□ -2.2
SF3B1-210ENST00000482158 TULP4Q9NRJ4 1543 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 248.5 ms