RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 ATRQ13535 2644 aa11.76□□□□□ -0.53
HOXB3-205ENST00000470495 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
HOXB3-205ENST00000470495 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
HOXB3-205ENST00000470495 COX7B2Q8TF08 81 aa11.75□□□□□ -0.53
HOXB3-205ENST00000470495 IGHV4-28A0A0C4DH34 117 aa11.75□□□□□ -0.53
HOXB3-205ENST00000470495 PRYO14603 147 aa11.74□□□□□ -0.53
HOXB3-205ENST00000470495 Q8N3U1 123 aa11.73□□□□□ -0.53
HOXB3-205ENST00000470495 FP248Q71RG6 208 aaPredicted RBP11.73□□□□□ -0.53
HOXB3-205ENST00000470495 NF1P21359 2839 aa11.73□□□□□ -0.53
HOXB3-205ENST00000470495 A8MUN3 132 aa11.73□□□□□ -0.53
HOXB3-205ENST00000470495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.73□□□□□ -0.53
HOXB3-205ENST00000470495 ANGP03950 147 aaKnown RBP11.72□□□□□ -0.53
HOXB3-205ENST00000470495 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
HOXB3-205ENST00000470495 IGLV10-54A0A075B6I4 117 aa11.72□□□□□ -0.53
HOXB3-205ENST00000470495 FBN2P35556 2912 aa11.72□□□□□ -0.53
HOXB3-205ENST00000470495 HCG22E2RYF7 251 aa11.71□□□□□ -0.53
HOXB3-205ENST00000470495 H7BZZ5 65 aa11.71□□□□□ -0.53
HOXB3-205ENST00000470495 MXRA5Q9NR99 2828 aa11.71□□□□□ -0.53
HOXB3-205ENST00000470495 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
HOXB3-205ENST00000470495 PRR15Q8IV56 129 aa11.7□□□□□ -0.54
HOXB3-205ENST00000470495 KRTAP1-1Q07627 177 aa11.69□□□□□ -0.54
HOXB3-205ENST00000470495 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
HOXB3-205ENST00000470495 GCN1Q92616 2671 aaKnown RBP11.69□□□□□ -0.54
HOXB3-205ENST00000470495 TRBV6-4A0A1B0GX49 114 aa11.68□□□□□ -0.54
HOXB3-205ENST00000470495 PRO0255Q9UI72 69 aa11.68□□□□□ -0.54
HOXB3-205ENST00000470495 SETXQ7Z333 2677 aaKnown RBP11.68□□□□□ -0.54
HOXB3-205ENST00000470495 BPY2O14599 106 aa11.67□□□□□ -0.54
HOXB3-205ENST00000470495 AMELXQ99217 191 aa11.67□□□□□ -0.54
HOXB3-205ENST00000470495 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
HOXB3-205ENST00000470495 COX6A2Q02221 97 aa11.66□□□□□ -0.54
HOXB3-205ENST00000470495 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
HOXB3-205ENST00000470495 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.54
HOXB3-205ENST00000470495 REG3AQ06141 175 aa11.65□□□□□ -0.54
HOXB3-205ENST00000470495 MP68P56378 58 aa11.65□□□□□ -0.54
HOXB3-205ENST00000470495 DEFB121Q5J5C9 76 aa11.65□□□□□ -0.54
HOXB3-205ENST00000470495 LINC00242Q5T6M2 205 aa11.65□□□□□ -0.55
HOXB3-205ENST00000470495 LCA10Q71F78 164 aa11.64□□□□□ -0.55
HOXB3-205ENST00000470495 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
HOXB3-205ENST00000470495 CSMD2Q7Z408 3487 aa11.64□□□□□ -0.55
HOXB3-205ENST00000470495 CD164L2Q6UWJ8 174 aa11.63□□□□□ -0.55
HOXB3-205ENST00000470495 Q6ZVQ6 151 aa11.63□□□□□ -0.55
HOXB3-205ENST00000470495 CDC42SE2Q9NRR3 84 aa11.63□□□□□ -0.55
HOXB3-205ENST00000470495 A8MTW9 85 aa11.62□□□□□ -0.55
HOXB3-205ENST00000470495 NTM-AS1Q6ZSK4 140 aa11.62□□□□□ -0.55
HOXB3-205ENST00000470495 FAM30AQ9NZY2 134 aa11.61□□□□□ -0.55
HOXB3-205ENST00000470495 TRAV10A0A0B4J240 114 aa11.6□□□□□ -0.55
HOXB3-205ENST00000470495 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
HOXB3-205ENST00000470495 TEP1Q99973 2627 aaKnown RBP11.6□□□□□ -0.55
HOXB3-205ENST00000470495 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
HOXB3-205ENST00000470495 M0R378 163 aa11.59□□□□□ -0.55
HOXB3-205ENST00000470495 NBEAL2Q6ZNJ1 2754 aa11.59□□□□□ -0.55
HOXB3-205ENST00000470495 CASC2Q6XLA1 102 aa11.59□□□□□ -0.55
HOXB3-205ENST00000470495 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
HOXB3-205ENST00000470495 NDUFA1O15239 70 aa11.58□□□□□ -0.56
HOXB3-205ENST00000470495 TM2D3Q9BRN9 247 aa11.58□□□□□ -0.56
HOXB3-205ENST00000470495 KRTAP10-3P60369 221 aa11.58□□□□□ -0.56
HOXB3-205ENST00000470495 RETNLBQ9BQ08 111 aa11.57□□□□□ -0.56
HOXB3-205ENST00000470495 GIG44P09565 113 aaPredicted RBP11.56□□□□□ -0.56
HOXB3-205ENST00000470495 C7orf65Q6ZTY9 151 aa11.56□□□□□ -0.56
HOXB3-205ENST00000470495 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
HOXB3-205ENST00000470495 KLK12Q9UKR0 248 aa11.56□□□□□ -0.56
HOXB3-205ENST00000470495 VPS13CQ709C8 3753 aa11.56□□□□□ -0.56
HOXB3-205ENST00000470495 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
HOXB3-205ENST00000470495 CXCL6P80162 114 aa11.54□□□□□ -0.56
HOXB3-205ENST00000470495 A0A087WYN8 130 aa11.54□□□□□ -0.56
HOXB3-205ENST00000470495 C19orf73Q9NVV2 129 aa11.53□□□□□ -0.56
HOXB3-205ENST00000470495 TRAV22A0A0B4J277 110 aa11.52□□□□□ -0.56
HOXB3-205ENST00000470495 LYPD5Q6UWN5 251 aa11.52□□□□□ -0.57
HOXB3-205ENST00000470495 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
HOXB3-205ENST00000470495 MAST4O15021 2626 aa11.51□□□□□ -0.57
HOXB3-205ENST00000470495 Q6ZRU5 148 aa11.51□□□□□ -0.57
HOXB3-205ENST00000470495 SMIM11BQ8TCY0 68 aa11.5□□□□□ -0.57
HOXB3-205ENST00000470495 KLKP1Q107X0 134 aa11.5□□□□□ -0.57
HOXB3-205ENST00000470495 CSNK1G2-AS1Q8NCQ2 148 aa11.49□□□□□ -0.57
HOXB3-205ENST00000470495 CHCHD10Q8WYQ3 142 aaPredicted RBP11.49□□□□□ -0.57
HOXB3-205ENST00000470495 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
HOXB3-205ENST00000470495 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
HOXB3-205ENST00000470495 Q8N9L7 120 aa11.49□□□□□ -0.57
HOXB3-205ENST00000470495 LINC01547P58512 204 aaPredicted RBP11.48□□□□□ -0.57
HOXB3-205ENST00000470495 X6R8D5 127 aa11.48□□□□□ -0.57
HOXB3-205ENST00000470495 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
HOXB3-205ENST00000470495 CUBNO60494 3623 aa11.47□□□□□ -0.57
HOXB3-205ENST00000470495 A0A0J9YWU9 116 aa11.47□□□□□ -0.57
HOXB3-205ENST00000470495 ATP11AUNQ6ZP68 121 aa11.46□□□□□ -0.58
HOXB3-205ENST00000470495 TENM4Q6N022 2769 aa11.45□□□□□ -0.58
HOXB3-205ENST00000470495 DEFB105AQ8NG35 78 aa11.45□□□□□ -0.58
HOXB3-205ENST00000470495 FAM218AQ96MZ4 157 aa11.45□□□□□ -0.58
HOXB3-205ENST00000470495 LIMD2Q9BT23 127 aa11.45□□□□□ -0.58
HOXB3-205ENST00000470495 ZFHX3Q15911 3703 aa11.44□□□□□ -0.58
HOXB3-205ENST00000470495 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
HOXB3-205ENST00000470495 PRR26Q8N8Z3 221 aa11.44□□□□□ -0.58
HOXB3-205ENST00000470495 IGKV2D-24A0A075B6R9 120 aa11.43□□□□□ -0.58
HOXB3-205ENST00000470495 C3orf84H3BNL1 204 aa11.42□□□□□ -0.58
HOXB3-205ENST00000470495 IGLV5-39A0A0G2JS06 123 aa11.41□□□□□ -0.58
HOXB3-205ENST00000470495 PDE6GP18545 87 aa11.4□□□□□ -0.58
HOXB3-205ENST00000470495 IBA57-AS1B1ANH7 110 aa11.4□□□□□ -0.58
HOXB3-205ENST00000470495 IGLV5-45A0A087WSX0 123 aa11.4□□□□□ -0.58
HOXB3-205ENST00000470495 SYCNQ0VAF6 134 aa11.4□□□□□ -0.59
HOXB3-205ENST00000470495 TRBV10-3A0A0K0K1G6 114 aa11.39□□□□□ -0.59
HOXB3-205ENST00000470495 PRAC1Q96KF2 57 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms