RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 C9orf153Q5TBE3 101 aa9.19□□□□□ -0.94
BRCA1-209ENST00000470026 INAFM1C9JVW0 142 aa9.19□□□□□ -0.94
BRCA1-209ENST00000470026 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
BRCA1-209ENST00000470026 NBEAL2Q6ZNJ1 2754 aa9.18□□□□□ -0.94
BRCA1-209ENST00000470026 CRYGAP11844 174 aa9.18□□□□□ -0.94
BRCA1-209ENST00000470026 SVIPQ8NHG7 77 aa9.18□□□□□ -0.94
BRCA1-209ENST00000470026 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
BRCA1-209ENST00000470026 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
BRCA1-209ENST00000470026 VWFP04275 2813 aa9.17□□□□□ -0.94
BRCA1-209ENST00000470026 HTN3P15516 51 aa9.16□□□□□ -0.94
BRCA1-209ENST00000470026 C3orf56Q8N813 242 aa9.16□□□□□ -0.94
BRCA1-209ENST00000470026 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
BRCA1-209ENST00000470026 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
BRCA1-209ENST00000470026 FASNP49327 2511 aaKnown RBP9.15□□□□□ -0.94
BRCA1-209ENST00000470026 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.94
BRCA1-209ENST00000470026 A0A087WVE0 104 aa9.14□□□□□ -0.95
BRCA1-209ENST00000470026 H3BNG1 76 aa9.14□□□□□ -0.95
BRCA1-209ENST00000470026 H3BQ85 93 aa9.14□□□□□ -0.95
BRCA1-209ENST00000470026 Q6ZQT0 140 aa9.14□□□□□ -0.95
BRCA1-209ENST00000470026 SMIM20Q8N5G0 67 aa9.14□□□□□ -0.95
BRCA1-209ENST00000470026 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
BRCA1-209ENST00000470026 KRTAP26-1Q6PEX3 210 aa9.14□□□□□ -0.95
BRCA1-209ENST00000470026 HELZ2Q9BYK8 2649 aaKnown RBP9.14□□□□□ -0.95
BRCA1-209ENST00000470026 KMT2BQ9UMN6 2715 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-209ENST00000470026 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
BRCA1-209ENST00000470026 SERP2Q8N6R1 65 aa9.13□□□□□ -0.95
BRCA1-209ENST00000470026 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
BRCA1-209ENST00000470026 UPK3BQ9BT76 320 aa9.11□□□□□ -0.95
BRCA1-209ENST00000470026 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
BRCA1-209ENST00000470026 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
BRCA1-209ENST00000470026 NOTCH2Q04721 2471 aa9.1□□□□□ -0.95
BRCA1-209ENST00000470026 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
BRCA1-209ENST00000470026 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
BRCA1-209ENST00000470026 Q6ZQY7 126 aa9.09□□□□□ -0.95
BRCA1-209ENST00000470026 VPREB1P12018 145 aa9.08□□□□□ -0.96
BRCA1-209ENST00000470026 PDE6GP18545 87 aa9.08□□□□□ -0.96
BRCA1-209ENST00000470026 WFDC10BQ8IUB3 73 aa9.08□□□□□ -0.96
BRCA1-209ENST00000470026 EGFEM1PQ0D2K5 195 aa9.08□□□□□ -0.96
BRCA1-209ENST00000470026 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-209ENST00000470026 XAGE1AQ9HD64 81 aa9.08□□□□□ -0.96
BRCA1-209ENST00000470026 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-209ENST00000470026 ELOF1P60002 83 aaKnown RBP9.07□□□□□ -0.96
BRCA1-209ENST00000470026 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-209ENST00000470026 NSD1Q96L73 2696 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-209ENST00000470026 LAMTOR3Q9UHA4 124 aa9.07□□□□□ -0.96
BRCA1-209ENST00000470026 FAM19A1Q7Z5A9 133 aa9.06□□□□□ -0.96
BRCA1-209ENST00000470026 CYSTM1Q9H1C7 97 aa9.06□□□□□ -0.96
BRCA1-209ENST00000470026 TENM1Q9UKZ4 2725 aa9.06□□□□□ -0.96
BRCA1-209ENST00000470026 M0R2N4 97 aa9.05□□□□□ -0.96
BRCA1-209ENST00000470026 COX7BP24311 80 aa9.05□□□□□ -0.96
BRCA1-209ENST00000470026 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
BRCA1-209ENST00000470026 CAMK2N2Q96S95 79 aa9.05□□□□□ -0.96
BRCA1-209ENST00000470026 OTOGQ6ZRI0 2925 aa9.05□□□□□ -0.96
BRCA1-209ENST00000470026 TRBV7-4A0A0J9YYF1 115 aa9.04□□□□□ -0.96
BRCA1-209ENST00000470026 M0R378 163 aa9.04□□□□□ -0.96
BRCA1-209ENST00000470026 HIGD2BQ4VC39 106 aa9.04□□□□□ -0.96
BRCA1-209ENST00000470026 DSCR8Q96T75 97 aa9.04□□□□□ -0.96
BRCA1-209ENST00000470026 GHRHP01286 108 aa9.04□□□□□ -0.96
BRCA1-209ENST00000470026 Q6ZRU5 148 aa9.04□□□□□ -0.96
BRCA1-209ENST00000470026 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
BRCA1-209ENST00000470026 F8WDY8 70 aa9.03□□□□□ -0.96
BRCA1-209ENST00000470026 BCE1O60756 84 aa9.03□□□□□ -0.96
BRCA1-209ENST00000470026 Q6ZTC4 211 aa9.02□□□□□ -0.96
BRCA1-209ENST00000470026 Q6ZVQ6 151 aa9.02□□□□□ -0.96
BRCA1-209ENST00000470026 RETNQ9HD89 108 aa9.02□□□□□ -0.96
BRCA1-209ENST00000470026 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-209ENST00000470026 KRTAP10-11P60412 298 aa9.01□□□□□ -0.97
BRCA1-209ENST00000470026 TMEM258P61165 79 aa9.01□□□□□ -0.97
BRCA1-209ENST00000470026 RPS28P62857 69 aaKnown RBP9.01□□□□□ -0.97
BRCA1-209ENST00000470026 ESRGQ1W209 222 aa9.01□□□□□ -0.97
BRCA1-209ENST00000470026 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
BRCA1-209ENST00000470026 HIVEP1P15822 2718 aa9.01□□□□□ -0.97
BRCA1-209ENST00000470026 CXCL6P80162 114 aa9□□□□□ -0.97
BRCA1-209ENST00000470026 LINC01556Q5JQF7 62 aa9□□□□□ -0.97
BRCA1-209ENST00000470026 OXLD1Q5BKU9 147 aa8.99□□□□□ -0.97
BRCA1-209ENST00000470026 TEP1Q99973 2627 aaKnown RBP8.99□□□□□ -0.97
BRCA1-209ENST00000470026 TRRAPQ9Y4A5 3859 aa8.98□□□□□ -0.97
BRCA1-209ENST00000470026 J3KT08 172 aa8.98□□□□□ -0.97
BRCA1-209ENST00000470026 Q6ZRP5 223 aa8.98□□□□□ -0.97
BRCA1-209ENST00000470026 C1orf43Q9BWL3 253 aa8.97□□□□□ -0.97
BRCA1-209ENST00000470026 ATRQ13535 2644 aa8.97□□□□□ -0.97
BRCA1-209ENST00000470026 HECTD1Q9ULT8 2610 aa8.95□□□□□ -0.98
BRCA1-209ENST00000470026 HAMPP81172 84 aa8.95□□□□□ -0.98
BRCA1-209ENST00000470026 SYCNQ0VAF6 134 aa8.94□□□□□ -0.98
BRCA1-209ENST00000470026 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
BRCA1-209ENST00000470026 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
BRCA1-209ENST00000470026 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
BRCA1-209ENST00000470026 LOC107984640A0A0U1RRK4 108 aa8.93□□□□□ -0.98
BRCA1-209ENST00000470026 DNAH10OSP0CZ25 163 aa8.93□□□□□ -0.98
BRCA1-209ENST00000470026 IGKV2D-24A0A075B6R9 120 aa8.92□□□□□ -0.98
BRCA1-209ENST00000470026 DEFB131BA0A096LNP1 70 aa8.92□□□□□ -0.98
BRCA1-209ENST00000470026 TLX1NBP0CAT3 122 aa8.92□□□□□ -0.98
BRCA1-209ENST00000470026 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
BRCA1-209ENST00000470026 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.99
BRCA1-209ENST00000470026 TRAV10A0A0B4J240 114 aa8.89□□□□□ -0.99
BRCA1-209ENST00000470026 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
BRCA1-209ENST00000470026 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
BRCA1-209ENST00000470026 C20orf197Q8N268 126 aa8.88□□□□□ -0.99
BRCA1-209ENST00000470026 IGLV5-37A0A075B6J1 123 aa8.87□□□□□ -0.99
BRCA1-209ENST00000470026 FAM19A5Q7Z5A7 132 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 355.6 ms