RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 AKAP6Q13023 2319 aa0.13□□□□□ -2.39
SMC4-208ENST00000467468 FXYD6Q9H0Q3 95 aa0.13□□□□□ -2.39
SMC4-208ENST00000467468 RGPD4Q7Z3J3 1758 aa0.13□□□□□ -2.39
SMC4-208ENST00000467468 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
SMC4-208ENST00000467468 HIVEP3Q5T1R4 2406 aa0.13□□□□□ -2.39
SMC4-208ENST00000467468 UBR1Q8IWV7 1749 aa0.13□□□□□ -2.39
SMC4-208ENST00000467468 VWFP04275 2813 aa0.12□□□□□ -2.39
SMC4-208ENST00000467468 CYB5AP00167 134 aa0.12□□□□□ -2.39
SMC4-208ENST00000467468 PRM1P04553 51 aa0.12□□□□□ -2.39
SMC4-208ENST00000467468 PLGLAQ15195 96 aa0.12□□□□□ -2.39
SMC4-208ENST00000467468 KLK9Q2XQG4 91 aa0.12□□□□□ -2.39
SMC4-208ENST00000467468 APLNQ9ULZ1 77 aa0.12□□□□□ -2.39
SMC4-208ENST00000467468 ANKRD36A6QL64 1941 aa0.12□□□□□ -2.39
SMC4-208ENST00000467468 MACF1Q9UPN3 7388 aaKnown RBP0.11□□□□□ -2.39
SMC4-208ENST00000467468 IQCF6A8MYZ5 107 aa0.11□□□□□ -2.39
SMC4-208ENST00000467468 DEFB112Q30KQ8 113 aa0.11□□□□□ -2.39
SMC4-208ENST00000467468 RABAC1Q9UI14 185 aa0.11□□□□□ -2.39
SMC4-208ENST00000467468 ALKQ9UM73 1620 aa0.11□□□□□ -2.39
SMC4-208ENST00000467468 FAT2Q9NYQ8 4349 aa0.11□□□□□ -2.39
SMC4-208ENST00000467468 LPAP08519 4548 aa0.1□□□□□ -2.39
SMC4-208ENST00000467468 RGPD3A6NKT7 1758 aaPredicted RBP0.1□□□□□ -2.39
SMC4-208ENST00000467468 SPTY2D1-AS1A0A0U1RR47 76 aa0.1□□□□□ -2.39
SMC4-208ENST00000467468 SNRPFP62306 86 aaKnown RBP0.1□□□□□ -2.39
SMC4-208ENST00000467468 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
SMC4-208ENST00000467468 A0A1B0GUT8 65 aa0.09□□□□□ -2.4
SMC4-208ENST00000467468 MRPL34Q9BQ48 92 aaKnown RBP0.09□□□□□ -2.4
SMC4-208ENST00000467468 DOPEY2Q9Y3R5 2298 aa0.09□□□□□ -2.4
SMC4-208ENST00000467468 ATP7BP35670 1465 aa0.09□□□□□ -2.4
SMC4-208ENST00000467468 MYMXA0A1B0GTQ4 84 aa0.08□□□□□ -2.4
SMC4-208ENST00000467468 LINC00643Q86TS7 51 aa0.08□□□□□ -2.4
SMC4-208ENST00000467468 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
SMC4-208ENST00000467468 PKD1L3Q7Z443 1732 aa0.07□□□□□ -2.4
SMC4-208ENST00000467468 WNK2Q9Y3S1 2297 aa0.07□□□□□ -2.4
SMC4-208ENST00000467468 SPRR2DP22532 72 aa0.07□□□□□ -2.4
SMC4-208ENST00000467468 MAGI2Q86UL8 1455 aa0.07□□□□□ -2.4
SMC4-208ENST00000467468 KMT2AQ03164 3969 aa0.06□□□□□ -2.4
SMC4-208ENST00000467468 TNXBP22105 4242 aa0.06□□□□□ -2.4
SMC4-208ENST00000467468 CCL22O00626 93 aa0.06□□□□□ -2.4
SMC4-208ENST00000467468 TDRG1Q3Y452 100 aa0.06□□□□□ -2.4
SMC4-208ENST00000467468 H1FX-AS1Q4G0G2 97 aa0.06□□□□□ -2.4
SMC4-208ENST00000467468 RB1CC1Q8TDY2 1594 aa0.06□□□□□ -2.4
SMC4-208ENST00000467468 KIF20BQ96Q89 1820 aa0.06□□□□□ -2.4
SMC4-208ENST00000467468 CLIP1P30622 1438 aa0.05□□□□□ -2.4
SMC4-208ENST00000467468 SPTBN1Q01082 2364 aaKnown RBP0.05□□□□□ -2.4
SMC4-208ENST00000467468 CHD6Q8TD26 2715 aa0.05□□□□□ -2.4
SMC4-208ENST00000467468 CACNA1AO00555 2505 aa0.05□□□□□ -2.4
SMC4-208ENST00000467468 ACYP1P07311 99 aa0.05□□□□□ -2.4
SMC4-208ENST00000467468 COX7BP24311 80 aa0.05□□□□□ -2.4
SMC4-208ENST00000467468 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
SMC4-208ENST00000467468 UACAQ9BZF9 1416 aa0.04□□□□□ -2.4
SMC4-208ENST00000467468 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
SMC4-208ENST00000467468 COL7A1Q02388 2944 aa0.04□□□□□ -2.4
SMC4-208ENST00000467468 KIF14Q15058 1648 aa0.04□□□□□ -2.4
SMC4-208ENST00000467468 ABCA2Q9BZC7 2435 aa0.04□□□□□ -2.4
SMC4-208ENST00000467468 PPLO60437 1756 aa0.04□□□□□ -2.4
SMC4-208ENST00000467468 URB1O60287 2271 aaKnown RBP0.03□□□□□ -2.4
SMC4-208ENST00000467468 UBR5O95071 2799 aaPredicted RBP0.03□□□□□ -2.4
SMC4-208ENST00000467468 PKD1L1Q8TDX9 2849 aa0.03□□□□□ -2.41
SMC4-208ENST00000467468 LRRC9Q6ZRR7 1453 aa0.03□□□□□ -2.41
SMC4-208ENST00000467468 LRRC7Q96NW7 1537 aa0.03□□□□□ -2.41
SMC4-208ENST00000467468 MAP3K4Q9Y6R4 1608 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 QSER1Q2KHR3 1735 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 COL14A1Q05707 1796 aaKnown RBP0.02□□□□□ -2.41
SMC4-208ENST00000467468 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 CEBPZOSA8MTT3 80 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 LOC730098B7Z3J9 87 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 GAFA1Q96PS6 74 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 MED14O60244 1454 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 NCOR1O75376 2440 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 GVINP1Q7Z2Y8 2422 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 TMEM131LA2VDJ0 1609 aa0.02□□□□□ -2.41
SMC4-208ENST00000467468 RGPD1P0DJD0 1748 aa0.01□□□□□ -2.41
SMC4-208ENST00000467468 BSNQ9UPA5 3926 aa0.01□□□□□ -2.41
SMC4-208ENST00000467468 DMBT1Q9UGM3 2413 aaPredicted RBP0.01□□□□□ -2.41
SMC4-208ENST00000467468 RGPD2P0DJD1 1756 aa0.01□□□□□ -2.41
SMC4-208ENST00000467468 PRKDCP78527 4128 aaKnown RBP0□□□□□ -2.41
SMC4-208ENST00000467468 HSPG2P98160 4391 aa0□□□□□ -2.41
SMC4-208ENST00000467468 KANTRA0A1W2PQU2 76 aa0□□□□□ -2.41
SMC4-208ENST00000467468 PTPN13Q12923 2485 aa0□□□□□ -2.41
SMC4-208ENST00000467468 TRAV21A0A0B4J279 112 aa-0.01□□□□□ -2.41
SMC4-208ENST00000467468 DSTQ03001 7570 aaKnown RBP-0.02□□□□□ -2.41
SMC4-208ENST00000467468 LELP1Q5T871 98 aa-0.02□□□□□ -2.41
SMC4-208ENST00000467468 CDKN2A-AS1Q9UH64 79 aa-0.02□□□□□ -2.41
SMC4-208ENST00000467468 UBR3Q6ZT12 1888 aa-0.02□□□□□ -2.41
SMC4-208ENST00000467468 BCORQ6W2J9 1755 aa-0.02□□□□□ -2.41
SMC4-208ENST00000467468 M0R2T5 61 aa-0.03□□□□□ -2.41
SMC4-208ENST00000467468 RPL38P63173 70 aaKnown RBP-0.03□□□□□ -2.41
SMC4-208ENST00000467468 HEPN1Q6WQI6 88 aa-0.03□□□□□ -2.41
SMC4-208ENST00000467468 CSPG4Q6UVK1 2322 aa-0.04□□□□□ -2.42
SMC4-208ENST00000467468 NDUFB1O75438 58 aa-0.05□□□□□ -2.42
SMC4-208ENST00000467468 WFDC9Q8NEX5 89 aa-0.05□□□□□ -2.42
SMC4-208ENST00000467468 PREX1Q8TCU6 1659 aa-0.05□□□□□ -2.42
SMC4-208ENST00000467468 USP32Q8NFA0 1604 aa-0.05□□□□□ -2.42
SMC4-208ENST00000467468 SUPT6HQ7KZ85 1726 aaKnown RBP-0.06□□□□□ -2.42
SMC4-208ENST00000467468 COX6B2Q6YFQ2 88 aa-0.06□□□□□ -2.42
SMC4-208ENST00000467468 S100A13Q99584 98 aa-0.06□□□□□ -2.42
SMC4-208ENST00000467468 ST20Q9HBF5 79 aa-0.06□□□□□ -2.42
SMC4-208ENST00000467468 CCDC18Q5T9S5 1454 aa-0.06□□□□□ -2.42
SMC4-208ENST00000467468 URB2Q14146 1524 aaKnown RBP-0.07□□□□□ -2.42
SMC4-208ENST00000467468 ATRQ13535 2644 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms