RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 PKDREJQ9NTG1 2253 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 RGPD2P0DJD1 1756 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 IQCF6A8MYZ5 107 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 ALKAL2Q6UX46 152 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 MAST4O15021 2626 aa0.28□□□□□ -2.37
HMGN3P1-201ENST00000453847 QSER1Q2KHR3 1735 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 NCOR2Q9Y618 2525 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 TNXBP22105 4242 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 CHD6Q8TD26 2715 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 ATP7BP35670 1465 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 DIP2BQ9P265 1576 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 MDN1Q9NU22 5596 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 ZNF831Q5JPB2 1677 aa0.26□□□□□ -2.37
HMGN3P1-201ENST00000453847 NCOR1O75376 2440 aa0.26□□□□□ -2.37
HMGN3P1-201ENST00000453847 HUWE1Q7Z6Z7 4374 aaKnown RBP0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 SMIM11AP58511 58 aa0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 FAT2Q9NYQ8 4349 aa0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 WNK2Q9Y3S1 2297 aa0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 COL14A1Q05707 1796 aaKnown RBP0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 LRRC7Q96NW7 1537 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 DEFB112Q30KQ8 113 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 USMG5Q96IX5 58 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 TENM4Q6N022 2769 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 HIVEP3Q5T1R4 2406 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 SUPT6HQ7KZ85 1726 aaKnown RBP0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 UACAQ9BZF9 1416 aa0.23□□□□□ -2.37
HMGN3P1-201ENST00000453847 KLK9Q2XQG4 91 aa0.23□□□□□ -2.37
HMGN3P1-201ENST00000453847 CCDC141Q6ZP82 1450 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 MAGI2Q86UL8 1455 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 KMT2AQ03164 3969 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 UBR5O95071 2799 aaPredicted RBP0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 MYMXA0A1B0GTQ4 84 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 SNRPFP62306 86 aaKnown RBP0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 POLR1AO95602 1720 aaPredicted RBP0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 USP32Q8NFA0 1604 aa0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 PRM1P04553 51 aa0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 DEFB105AQ8NG35 78 aa0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 BSNQ9UPA5 3926 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 MUC5ACP98088 5654 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 CPSF4LA6NMK7 179 aaKnown RBP0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 COX8AP10176 69 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 PLGLAQ15195 96 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 LINC00643Q86TS7 51 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 FXYD6Q9H0Q3 95 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 CCDC18Q5T9S5 1454 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 A0A1B0GUT8 65 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 MRPL34Q9BQ48 92 aaKnown RBP0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 RABAC1Q9UI14 185 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 APLNQ9ULZ1 77 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 BCORQ6W2J9 1755 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 ARHGAP35Q9NRY4 1499 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 I3L3M4 83 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 LELP1Q5T871 98 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 CACNA1AO00555 2505 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 LTN1O94822 1766 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 SCRIBQ14160 1630 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 LRRC9Q6ZRR7 1453 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 SPTY2D1-AS1A0A0U1RR47 76 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 PREX1Q8TCU6 1659 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 ERVK-7P63135 1459 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 DOT1LQ8TEK3 1739 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 CEP170BQ9Y4F5 1589 aaPredicted RBP0.15□□□□□ -2.38
HMGN3P1-201ENST00000453847 PKD1L1Q8TDX9 2849 aa0.15□□□□□ -2.38
HMGN3P1-201ENST00000453847 ABCA2Q9BZC7 2435 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 DCAF1Q9Y4B6 1507 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 COX7BP24311 80 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 H1FX-AS1Q4G0G2 97 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 UBR3Q6ZT12 1888 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 CSPG4Q6UVK1 2322 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 LPAP08519 4548 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 KMT2DO14686 5537 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 ATRQ13535 2644 aa0.14□□□□□ -2.39
HMGN3P1-201ENST00000453847 CEBPZOSA8MTT3 80 aa0.14□□□□□ -2.39
HMGN3P1-201ENST00000453847 PIK3C2BO00750 1634 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 TRAV21A0A0B4J279 112 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 TIAM2Q8IVF5 1701 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 ALMS1Q8TCU4 4167 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 ACYP1P07311 99 aa0.12□□□□□ -2.39
HMGN3P1-201ENST00000453847 NCOA2Q15596 1464 aa0.11□□□□□ -2.39
HMGN3P1-201ENST00000453847 GAFA1Q96PS6 74 aa0.11□□□□□ -2.39
HMGN3P1-201ENST00000453847 PTPN13Q12923 2485 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 MAGI3Q5TCQ9 1506 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 SPINK4O60575 86 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 ST20Q9HBF5 79 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 SPRR2DP22532 72 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 REV3LO60673 3130 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 SPTA1P02549 2419 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 COL7A1Q02388 2944 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 DMBT1Q9UGM3 2413 aaPredicted RBP0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 URB2Q14146 1524 aaKnown RBP0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 KDM5DQ9BY66 1539 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 CLIP1P30622 1438 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 KANTRA0A1W2PQU2 76 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms