RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 CNTRLQ7Z7A1 2325 aa2.11□□□□□ -2.07
HMGB3P10-201ENST00000434734 LAMC1P11047 1609 aa2.1□□□□□ -2.07
HMGB3P10-201ENST00000434734 FBN1P35555 2871 aaKnown RBP2.1□□□□□ -2.07
HMGB3P10-201ENST00000434734 LYNX1P0DP58 116 aa2.1□□□□□ -2.07
HMGB3P10-201ENST00000434734 RICTORQ6R327 1708 aa2.1□□□□□ -2.07
HMGB3P10-201ENST00000434734 ANKRD17O75179 2603 aaKnown RBP2.09□□□□□ -2.07
HMGB3P10-201ENST00000434734 K7EIL1 84 aa2.09□□□□□ -2.07
HMGB3P10-201ENST00000434734 KRTAP13-1Q8IUC0 172 aa2.09□□□□□ -2.07
HMGB3P10-201ENST00000434734 SORL1Q92673 2214 aa2.09□□□□□ -2.08
HMGB3P10-201ENST00000434734 URB1O60287 2271 aaKnown RBP2.08□□□□□ -2.08
HMGB3P10-201ENST00000434734 NRAPQ86VF7 1730 aa2.08□□□□□ -2.08
HMGB3P10-201ENST00000434734 LCE6AA0A183 80 aa2.08□□□□□ -2.08
HMGB3P10-201ENST00000434734 ALS2Q96Q42 1657 aa2.08□□□□□ -2.08
HMGB3P10-201ENST00000434734 ERCC6L2Q5T890 1561 aa2.07□□□□□ -2.08
HMGB3P10-201ENST00000434734 EIF2AK4Q9P2K8 1649 aaKnown RBP2.07□□□□□ -2.08
HMGB3P10-201ENST00000434734 LINC01549A6NIU2 74 aa2.07□□□□□ -2.08
HMGB3P10-201ENST00000434734 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
HMGB3P10-201ENST00000434734 GOLGA4Q13439 2230 aaKnown RBP2.07□□□□□ -2.08
HMGB3P10-201ENST00000434734 ANKRD50Q9ULJ7 1429 aa2.07□□□□□ -2.08
HMGB3P10-201ENST00000434734 PRXQ9BXM0 1461 aa2.07□□□□□ -2.08
HMGB3P10-201ENST00000434734 A0A0G2JMZ2 1700 aa2.06□□□□□ -2.08
HMGB3P10-201ENST00000434734 COX7BP24311 80 aa2.06□□□□□ -2.08
HMGB3P10-201ENST00000434734 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
HMGB3P10-201ENST00000434734 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
HMGB3P10-201ENST00000434734 NAV3Q8IVL0 2385 aa2.06□□□□□ -2.08
HMGB3P10-201ENST00000434734 MROH2AA6NES4 1674 aa2.06□□□□□ -2.08
HMGB3P10-201ENST00000434734 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
HMGB3P10-201ENST00000434734 DEFB119Q8N690 84 aa2.05□□□□□ -2.08
HMGB3P10-201ENST00000434734 ENHOQ6UWT2 76 aa2.04□□□□□ -2.08
HMGB3P10-201ENST00000434734 QSER1Q2KHR3 1735 aa2.03□□□□□ -2.08
HMGB3P10-201ENST00000434734 RNF17Q9BXT8 1623 aaKnown RBP2.03□□□□□ -2.08
HMGB3P10-201ENST00000434734 RP1L1Q8IWN7 2480 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P10-201ENST00000434734 CRIPTQ9P021 101 aa2.02□□□□□ -2.09
HMGB3P10-201ENST00000434734 TULP4Q9NRJ4 1543 aa2.01□□□□□ -2.09
HMGB3P10-201ENST00000434734 JMJD1CQ15652 2540 aa2□□□□□ -2.09
HMGB3P10-201ENST00000434734 TNCP24821 2201 aa1.99□□□□□ -2.09
HMGB3P10-201ENST00000434734 J3QKU1 62 aa1.99□□□□□ -2.09
HMGB3P10-201ENST00000434734 NDUFA4O00483 81 aa1.99□□□□□ -2.09
HMGB3P10-201ENST00000434734 LRRC37AA6NMS7 1700 aa1.99□□□□□ -2.09
HMGB3P10-201ENST00000434734 COL6A6A6NMZ7 2263 aa1.98□□□□□ -2.09
HMGB3P10-201ENST00000434734 CLASP1Q7Z460 1538 aa1.98□□□□□ -2.09
HMGB3P10-201ENST00000434734 A0A0D9SFI3 127 aa1.98□□□□□ -2.09
HMGB3P10-201ENST00000434734 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
HMGB3P10-201ENST00000434734 ROS1P08922 2347 aa1.97□□□□□ -2.09
HMGB3P10-201ENST00000434734 ABCC6O95255 1503 aa1.96□□□□□ -2.09
HMGB3P10-201ENST00000434734 A0A1B0GUL6 1792 aa1.96□□□□□ -2.1
HMGB3P10-201ENST00000434734 Q6ZSA8 131 aa1.96□□□□□ -2.1
HMGB3P10-201ENST00000434734 FXYD6Q9H0Q3 95 aa1.96□□□□□ -2.1
HMGB3P10-201ENST00000434734 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
HMGB3P10-201ENST00000434734 CPS1P31327 1500 aa1.96□□□□□ -2.1
HMGB3P10-201ENST00000434734 MAST1Q9Y2H9 1570 aa1.95□□□□□ -2.1
HMGB3P10-201ENST00000434734 DOPEY2Q9Y3R5 2298 aa1.95□□□□□ -2.1
HMGB3P10-201ENST00000434734 CPSF4LA6NMK7 179 aaKnown RBP1.95□□□□□ -2.1
HMGB3P10-201ENST00000434734 I3L2K1 104 aa1.95□□□□□ -2.1
HMGB3P10-201ENST00000434734 K7EMI3 77 aa1.95□□□□□ -2.1
HMGB3P10-201ENST00000434734 FXYD6P3P58550 94 aa1.95□□□□□ -2.1
HMGB3P10-201ENST00000434734 TJP1Q07157 1748 aa1.94□□□□□ -2.1
HMGB3P10-201ENST00000434734 OTOGLQ3ZCN5 2332 aa1.93□□□□□ -2.1
HMGB3P10-201ENST00000434734 PLCE1Q9P212 2302 aa1.93□□□□□ -2.1
HMGB3P10-201ENST00000434734 SPTY2D1-AS1A0A0U1RR47 76 aa1.93□□□□□ -2.1
HMGB3P10-201ENST00000434734 FCER1GP30273 86 aa1.93□□□□□ -2.1
HMGB3P10-201ENST00000434734 TP53AIP1Q9HCN2 124 aa1.93□□□□□ -2.1
HMGB3P10-201ENST00000434734 FAM208BQ5VWN6 2430 aa1.93□□□□□ -2.1
HMGB3P10-201ENST00000434734 CROCC2H7BZ55 1655 aa1.93□□□□□ -2.1
HMGB3P10-201ENST00000434734 UBL5Q9BZL1 73 aa1.92□□□□□ -2.1
HMGB3P10-201ENST00000434734 UGGT1Q9NYU2 1555 aa1.92□□□□□ -2.1
HMGB3P10-201ENST00000434734 NWD1Q149M9 1564 aa1.91□□□□□ -2.1
HMGB3P10-201ENST00000434734 FANCD2Q9BXW9 1451 aa1.9□□□□□ -2.11
HMGB3P10-201ENST00000434734 LY75O60449 1722 aa1.9□□□□□ -2.11
HMGB3P10-201ENST00000434734 SYCP2Q9BX26 1530 aa1.9□□□□□ -2.11
HMGB3P10-201ENST00000434734 ANGP03950 147 aaKnown RBP1.89□□□□□ -2.11
HMGB3P10-201ENST00000434734 SPINK9Q5DT21 86 aa1.89□□□□□ -2.11
HMGB3P10-201ENST00000434734 CACNA1EQ15878 2313 aa1.89□□□□□ -2.11
HMGB3P10-201ENST00000434734 SNRPGP15A8MWD9 76 aa1.88□□□□□ -2.11
HMGB3P10-201ENST00000434734 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.88□□□□□ -2.11
HMGB3P10-201ENST00000434734 K7EQZ3 153 aa1.87□□□□□ -2.11
HMGB3P10-201ENST00000434734 ARL14EPLP0DKL9 152 aa1.87□□□□□ -2.11
HMGB3P10-201ENST00000434734 RPL38P63173 70 aaKnown RBP1.87□□□□□ -2.11
HMGB3P10-201ENST00000434734 DDX60LQ5H9U9 1706 aaKnown RBP1.87□□□□□ -2.11
HMGB3P10-201ENST00000434734 NCBP2-AS2Q69YL0 99 aa1.87□□□□□ -2.11
HMGB3P10-201ENST00000434734 ANKRD36CQ5JPF3 1778 aa1.87□□□□□ -2.11
HMGB3P10-201ENST00000434734 DEFB123Q8N688 67 aa1.86□□□□□ -2.11
HMGB3P10-201ENST00000434734 HIVEP2P31629 2446 aa1.86□□□□□ -2.11
HMGB3P10-201ENST00000434734 A0A0D9SG42 100 aa1.85□□□□□ -2.11
HMGB3P10-201ENST00000434734 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
HMGB3P10-201ENST00000434734 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
HMGB3P10-201ENST00000434734 PIGYQ3MUY2 71 aa1.85□□□□□ -2.11
HMGB3P10-201ENST00000434734 KCNQ1DNQ9H478 68 aa1.84□□□□□ -2.11
HMGB3P10-201ENST00000434734 CNOT1A5YKK6 2376 aaKnown RBP1.84□□□□□ -2.12
HMGB3P10-201ENST00000434734 ASH1LQ9NR48 2969 aaKnown RBP1.83□□□□□ -2.12
HMGB3P10-201ENST00000434734 I3L3M4 83 aa1.83□□□□□ -2.12
HMGB3P10-201ENST00000434734 CNFNQ9BYD5 112 aa1.83□□□□□ -2.12
HMGB3P10-201ENST00000434734 BIVM-ERCC5R4GMW8 1640 aa1.83□□□□□ -2.12
HMGB3P10-201ENST00000434734 USF3Q68DE3 2245 aa1.83□□□□□ -2.12
HMGB3P10-201ENST00000434734 COX6A2Q02221 97 aa1.82□□□□□ -2.12
HMGB3P10-201ENST00000434734 PRO0255Q9UI72 69 aa1.82□□□□□ -2.12
HMGB3P10-201ENST00000434734 ETDCA0A1B0GVM5 59 aa1.81□□□□□ -2.12
HMGB3P10-201ENST00000434734 M0R1W7 72 aa1.81□□□□□ -2.12
HMGB3P10-201ENST00000434734 USMG5Q96IX5 58 aa1.81□□□□□ -2.12
HMGB3P10-201ENST00000434734 MRPL34Q9BQ48 92 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms