RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 PIN1P1O15428 100 aa2.43□□□□□ -2.02
PTP4A1P1-201ENST00000420539 RPL37P61927 97 aaKnown RBP2.43□□□□□ -2.02
PTP4A1P1-201ENST00000420539 SSBP3-AS1Q7Z2R9 100 aa2.43□□□□□ -2.02
PTP4A1P1-201ENST00000420539 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
PTP4A1P1-201ENST00000420539 UGGT1Q9NYU2 1555 aa2.42□□□□□ -2.02
PTP4A1P1-201ENST00000420539 ENHOQ6UWT2 76 aa2.42□□□□□ -2.02
PTP4A1P1-201ENST00000420539 CADP27708 2225 aa2.42□□□□□ -2.02
PTP4A1P1-201ENST00000420539 SLIT1O75093 1534 aa2.42□□□□□ -2.02
PTP4A1P1-201ENST00000420539 CROCC2H7BZ55 1655 aa2.41□□□□□ -2.02
PTP4A1P1-201ENST00000420539 CACNA1BQ00975 2339 aa2.41□□□□□ -2.02
PTP4A1P1-201ENST00000420539 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
PTP4A1P1-201ENST00000420539 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
PTP4A1P1-201ENST00000420539 DOT1LQ8TEK3 1739 aa2.41□□□□□ -2.02
PTP4A1P1-201ENST00000420539 COX7BP24311 80 aa2.39□□□□□ -2.03
PTP4A1P1-201ENST00000420539 A0A0G2JMZ2 1700 aa2.39□□□□□ -2.03
PTP4A1P1-201ENST00000420539 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
PTP4A1P1-201ENST00000420539 UBL5Q9BZL1 73 aa2.37□□□□□ -2.03
PTP4A1P1-201ENST00000420539 BIVM-ERCC5R4GMW8 1640 aa2.37□□□□□ -2.03
PTP4A1P1-201ENST00000420539 PLXNB2O15031 1838 aa2.36□□□□□ -2.03
PTP4A1P1-201ENST00000420539 NDUFA4O00483 81 aa2.36□□□□□ -2.03
PTP4A1P1-201ENST00000420539 FCER1GP30273 86 aa2.35□□□□□ -2.03
PTP4A1P1-201ENST00000420539 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
PTP4A1P1-201ENST00000420539 NCBP2-AS2Q69YL0 99 aa2.35□□□□□ -2.03
PTP4A1P1-201ENST00000420539 ASXL3Q9C0F0 2248 aa2.35□□□□□ -2.03
PTP4A1P1-201ENST00000420539 ANKRD17O75179 2603 aaKnown RBP2.35□□□□□ -2.03
PTP4A1P1-201ENST00000420539 LY75O60449 1722 aa2.34□□□□□ -2.03
PTP4A1P1-201ENST00000420539 ERCC6L2Q5T890 1561 aa2.34□□□□□ -2.03
PTP4A1P1-201ENST00000420539 QSER1Q2KHR3 1735 aa2.34□□□□□ -2.04
PTP4A1P1-201ENST00000420539 ABCA5Q8WWZ7 1642 aa2.33□□□□□ -2.04
PTP4A1P1-201ENST00000420539 UBE2DNLQ8IWF7 75 aa2.33□□□□□ -2.04
PTP4A1P1-201ENST00000420539 EFCAB6Q5THR3 1501 aa2.32□□□□□ -2.04
PTP4A1P1-201ENST00000420539 LRRC37AA6NMS7 1700 aa2.32□□□□□ -2.04
PTP4A1P1-201ENST00000420539 TULP4Q9NRJ4 1543 aa2.32□□□□□ -2.04
PTP4A1P1-201ENST00000420539 TECTAO75443 2155 aa2.32□□□□□ -2.04
PTP4A1P1-201ENST00000420539 K7EMI3 77 aa2.31□□□□□ -2.04
PTP4A1P1-201ENST00000420539 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
PTP4A1P1-201ENST00000420539 ZDBF2Q9HCK1 2354 aa2.31□□□□□ -2.04
PTP4A1P1-201ENST00000420539 NOTCH2Q04721 2471 aa2.3□□□□□ -2.04
PTP4A1P1-201ENST00000420539 FLG2Q5D862 2391 aaPredicted RBP2.29□□□□□ -2.04
PTP4A1P1-201ENST00000420539 C3P01024 1663 aa2.29□□□□□ -2.04
PTP4A1P1-201ENST00000420539 ADCY10Q96PN6 1610 aa2.29□□□□□ -2.04
PTP4A1P1-201ENST00000420539 KNTC1P50748 2209 aa2.28□□□□□ -2.04
PTP4A1P1-201ENST00000420539 CPSF4LA6NMK7 179 aaKnown RBP2.28□□□□□ -2.04
PTP4A1P1-201ENST00000420539 K7EIL1 84 aa2.28□□□□□ -2.04
PTP4A1P1-201ENST00000420539 RPL38P63173 70 aaKnown RBP2.28□□□□□ -2.04
PTP4A1P1-201ENST00000420539 TJP1Q07157 1748 aa2.27□□□□□ -2.05
PTP4A1P1-201ENST00000420539 ANKRD36CQ5JPF3 1778 aa2.26□□□□□ -2.05
PTP4A1P1-201ENST00000420539 SPTY2D1-AS1A0A0U1RR47 76 aa2.26□□□□□ -2.05
PTP4A1P1-201ENST00000420539 TOMM5Q8N4H5 51 aa2.26□□□□□ -2.05
PTP4A1P1-201ENST00000420539 NWD1Q149M9 1564 aa2.26□□□□□ -2.05
PTP4A1P1-201ENST00000420539 PRH1P02810 166 aa2.25□□□□□ -2.05
PTP4A1P1-201ENST00000420539 TNCP24821 2201 aa2.24□□□□□ -2.05
PTP4A1P1-201ENST00000420539 ANGP03950 147 aaKnown RBP2.24□□□□□ -2.05
PTP4A1P1-201ENST00000420539 DEFB119Q8N690 84 aa2.24□□□□□ -2.05
PTP4A1P1-201ENST00000420539 KCNQ1DNQ9H478 68 aa2.24□□□□□ -2.05
PTP4A1P1-201ENST00000420539 URB1O60287 2271 aaKnown RBP2.23□□□□□ -2.05
PTP4A1P1-201ENST00000420539 NMES1Q9C002 83 aa2.23□□□□□ -2.05
PTP4A1P1-201ENST00000420539 NRXN3Q9Y4C0 1643 aa2.23□□□□□ -2.05
PTP4A1P1-201ENST00000420539 M0R1W7 72 aa2.22□□□□□ -2.05
PTP4A1P1-201ENST00000420539 ARL14EPLP0DKL9 152 aa2.22□□□□□ -2.05
PTP4A1P1-201ENST00000420539 FXYD6P3P58550 94 aa2.22□□□□□ -2.05
PTP4A1P1-201ENST00000420539 DEFB114Q30KQ6 69 aa2.22□□□□□ -2.05
PTP4A1P1-201ENST00000420539 AHCTF1Q8WYP5 2266 aa2.22□□□□□ -2.05
PTP4A1P1-201ENST00000420539 CNTRLQ7Z7A1 2325 aa2.21□□□□□ -2.06
PTP4A1P1-201ENST00000420539 CMC2Q9NRP2 79 aa2.21□□□□□ -2.06
PTP4A1P1-201ENST00000420539 IQGAP2Q13576 1575 aa2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 GOLGA4Q13439 2230 aaKnown RBP2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 ETDCA0A1B0GVM5 59 aa2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 I3L2K1 104 aa2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 KRTAP13-1Q8IUC0 172 aa2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 CRIPTQ9P021 101 aa2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 AGLP35573 1532 aa2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 KIAA0586Q9BVV6 1533 aa2.2□□□□□ -2.06
PTP4A1P1-201ENST00000420539 ABCC8Q09428 1581 aa2.19□□□□□ -2.06
PTP4A1P1-201ENST00000420539 FBN1P35555 2871 aaKnown RBP2.19□□□□□ -2.06
PTP4A1P1-201ENST00000420539 LYNX1P0DP58 116 aa2.19□□□□□ -2.06
PTP4A1P1-201ENST00000420539 TP53AIP1Q9HCN2 124 aa2.19□□□□□ -2.06
PTP4A1P1-201ENST00000420539 DDX60LQ5H9U9 1706 aaKnown RBP2.18□□□□□ -2.06
PTP4A1P1-201ENST00000420539 IGIPA6NJ69 53 aa2.18□□□□□ -2.06
PTP4A1P1-201ENST00000420539 SERF2P84101 59 aa2.18□□□□□ -2.06
PTP4A1P1-201ENST00000420539 NAV3Q8IVL0 2385 aa2.18□□□□□ -2.06
PTP4A1P1-201ENST00000420539 JMJD1CQ15652 2540 aa2.17□□□□□ -2.06
PTP4A1P1-201ENST00000420539 I3L3M4 83 aa2.17□□□□□ -2.06
PTP4A1P1-201ENST00000420539 PLNP26678 52 aa2.16□□□□□ -2.06
PTP4A1P1-201ENST00000420539 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
PTP4A1P1-201ENST00000420539 DEFB123Q8N688 67 aa2.15□□□□□ -2.07
PTP4A1P1-201ENST00000420539 DEFB131BA0A096LNP1 70 aa2.14□□□□□ -2.07
PTP4A1P1-201ENST00000420539 K7EQZ3 153 aa2.14□□□□□ -2.07
PTP4A1P1-201ENST00000420539 ABRACLQ9P1F3 81 aa2.14□□□□□ -2.07
PTP4A1P1-201ENST00000420539 MRPL33O75394 65 aaKnown RBP2.13□□□□□ -2.07
PTP4A1P1-201ENST00000420539 PIGYQ3MUY2 71 aa2.13□□□□□ -2.07
PTP4A1P1-201ENST00000420539 USMG5Q96IX5 58 aa2.13□□□□□ -2.07
PTP4A1P1-201ENST00000420539 FAM208BQ5VWN6 2430 aa2.12□□□□□ -2.07
PTP4A1P1-201ENST00000420539 CRIP1P50238 77 aa2.12□□□□□ -2.07
PTP4A1P1-201ENST00000420539 C10orf95Q9H7T3 257 aa2.12□□□□□ -2.07
PTP4A1P1-201ENST00000420539 CACNA1EQ15878 2313 aa2.11□□□□□ -2.07
PTP4A1P1-201ENST00000420539 SMIM27A0A1W2PRY6 76 aa2.11□□□□□ -2.07
PTP4A1P1-201ENST00000420539 J3QKU1 62 aa2.11□□□□□ -2.07
PTP4A1P1-201ENST00000420539 COX6B1P14854 86 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms