RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 Q8N814 137 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 C15orf56Q8N910 161 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 RMI2Q96E14 147 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 BPESC1Q9GZL8 116 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 C14orf132Q9NPU4 83 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 WDR87Q6ZQQ6 2873 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 POLEQ07864 2286 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 PKDREJQ9NTG1 2253 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGLV1-50A0A075B6I6 118 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 A8MWP4 228 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 B4DSR2 109 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 C3orf84H3BNL1 204 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 H7BZZ5 65 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 LECT2O14960 151 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 LY6HO94772 140 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 MSMBP08118 114 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 TLX1NBP0CAT3 122 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 FUSP35637 526 aaKnown RBP eCLIP2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 UBE2AP49459 152 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 LINC00158P58513 81 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 DEFB1P60022 68 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 BLCAPP62952 87 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 DEFB123Q8N688 67 aa2.28□□□□□ -2.04
HMGB3P23-201ENST00000414981 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 ZDBF2Q9HCK1 2354 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 ROS1P08922 2347 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 IGKV3-7A0A075B6H7 116 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 IGKV3D-7A0A0C4DH55 119 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 DEFB131AP59861 70 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 KRTAP10-1P60331 282 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 RBM3P98179 157 aaKnown RBP2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 DEFB114Q30KQ6 69 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 Q6ZQT0 140 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 NTM-AS1Q6ZSK4 140 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 CAMK2N1Q7Z7J9 78 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 DYNLRB2Q8TF09 96 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 C4orf3Q8WVX3 66 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 USP34Q70CQ2 3546 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 FRYQ5TBA9 3013 aa2.27□□□□□ -2.05
HMGB3P23-201ENST00000414981 TNRC18O15417 2968 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 TPRP12270 2363 aaKnown RBP2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 TRBV6-8A0A0A6YYG3 113 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 IGHV3-73A0A0B4J1V6 119 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 BPY2O14599 106 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 NCR3O14931 201 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 ENHOQ6UWT2 76 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 LINC00575Q6W349 94 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 C20orf197Q8N268 126 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 CYSTM1Q9H1C7 97 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 XAGE1AQ9HD64 81 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 TRIOO75962 3097 aa2.26□□□□□ -2.05
HMGB3P23-201ENST00000414981 GPR179Q6PRD1 2367 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 SPTBN5Q9NRC6 3674 aaKnown RBP2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 TRAV23DV6A0A075B6W5 121 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 A0A087WVE0 104 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 GVQW2A0A096LPI5 108 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 TRGV1A0A0A0MS02 117 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 LINC00959A0A1B0GUT2 108 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 ZZEF1O43149 2961 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 MIFP14174 115 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 LY6EQ16553 131 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 BRD3OSQ6XYD6 125 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 DEFB104AQ8WTQ1 72 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 NBEAQ8NFP9 2946 aa2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 ANKHD1Q8IWZ3 2542 aaKnown RBP2.25□□□□□ -2.05
HMGB3P23-201ENST00000414981 DOPEY2Q9Y3R5 2298 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 TRBV7-4A0A0J9YYF1 115 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 A6NED7 52 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 IGLV6-57P01721 117 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 HTN1P15515 57 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 Q8NDZ9 215 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 TOMM7Q9P0U1 55 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 CFAP54Q96N23 3096 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 WDFY3Q8IZQ1 3526 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 CNOT1A5YKK6 2376 aaKnown RBP2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 SPEGQ15772 3267 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 FRYLO94915 3013 aa2.24□□□□□ -2.05
HMGB3P23-201ENST00000414981 APC2O95996 2303 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 A0A096LNT2 108 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 TRGV4A0A0C4DH28 118 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 K7ERS5 55 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 IGLV1-51P01701 117 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 COX7BP24311 80 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 SYCNQ0VAF6 134 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 ESRGQ1W209 222 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 DEFB112Q30KQ8 113 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 ATP11AUNQ6ZP68 121 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 TMEM254Q8TBM7 123 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 CCL19Q99731 98 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 KLK12Q9UKR0 248 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 OTOGLQ3ZCN5 2332 aa2.23□□□□□ -2.05
HMGB3P23-201ENST00000414981 COL6A3P12111 3177 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 FREM2Q5SZK8 3169 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 PCNX1Q96RV3 2341 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 VPS13AQ96RL7 3174 aa2.22□□□□□ -2.05
HMGB3P23-201ENST00000414981 IGLV4-60A0A075B6I1 120 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms