RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 C4orf48Q5BLP8 95 aa6.6□□□□□ -1.35
SF3A3-201ENST00000373019 C6orf223Q8N319 242 aa6.6□□□□□ -1.35
SF3A3-201ENST00000373019 BPY2O14599 106 aa6.59□□□□□ -1.35
SF3A3-201ENST00000373019 ZNF561-AS1K7EIQ3 104 aa6.59□□□□□ -1.35
SF3A3-201ENST00000373019 PRYO14603 147 aa6.59□□□□□ -1.35
SF3A3-201ENST00000373019 NF1P21359 2839 aa6.58□□□□□ -1.36
SF3A3-201ENST00000373019 FUSP35637 526 aaKnown RBP eCLIP6.58□□□□□ -1.36
SF3A3-201ENST00000373019 PDZD2O15018 2839 aa6.58□□□□□ -1.36
SF3A3-201ENST00000373019 Q1T7F1 81 aa6.58□□□□□ -1.36
SF3A3-201ENST00000373019 OCR1Q9BZK8 76 aa6.58□□□□□ -1.36
SF3A3-201ENST00000373019 C9orf66Q5T8R8 295 aa6.57□□□□□ -1.36
SF3A3-201ENST00000373019 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
SF3A3-201ENST00000373019 LMO4P61968 165 aa6.57□□□□□ -1.36
SF3A3-201ENST00000373019 LRCOL1A6NCL2 159 aa6.57□□□□□ -1.36
SF3A3-201ENST00000373019 LINC00575Q6W349 94 aa6.57□□□□□ -1.36
SF3A3-201ENST00000373019 A8MTW9 85 aa6.56□□□□□ -1.36
SF3A3-201ENST00000373019 BRD3OSQ6XYD6 125 aa6.56□□□□□ -1.36
SF3A3-201ENST00000373019 LAMTOR3Q9UHA4 124 aa6.56□□□□□ -1.36
SF3A3-201ENST00000373019 C6orf99Q4VX62 202 aa6.56□□□□□ -1.36
SF3A3-201ENST00000373019 CD164L2Q6UWJ8 174 aa6.56□□□□□ -1.36
SF3A3-201ENST00000373019 IGKV3OR2-268A0A0C4DH90 116 aa6.56□□□□□ -1.36
SF3A3-201ENST00000373019 LY6EQ16553 131 aa6.56□□□□□ -1.36
SF3A3-201ENST00000373019 Q8NDZ9 215 aa6.55□□□□□ -1.36
SF3A3-201ENST00000373019 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
SF3A3-201ENST00000373019 A8MU10 97 aa6.55□□□□□ -1.36
SF3A3-201ENST00000373019 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
SF3A3-201ENST00000373019 IGHV4-38-2P0DP08 117 aa6.55□□□□□ -1.36
SF3A3-201ENST00000373019 IGLV4-60A0A075B6I1 120 aa6.55□□□□□ -1.36
SF3A3-201ENST00000373019 DYNLRB2Q8TF09 96 aa6.55□□□□□ -1.36
SF3A3-201ENST00000373019 C11orf44Q8N8P7 122 aa6.54□□□□□ -1.36
SF3A3-201ENST00000373019 NSD1Q96L73 2696 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-201ENST00000373019 Q8N9L7 120 aa6.54□□□□□ -1.36
SF3A3-201ENST00000373019 MUC7Q8TAX7 377 aa6.54□□□□□ -1.36
SF3A3-201ENST00000373019 DAD1P61803 113 aa6.54□□□□□ -1.36
SF3A3-201ENST00000373019 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
SF3A3-201ENST00000373019 UBE2L6O14933 153 aa6.53□□□□□ -1.36
SF3A3-201ENST00000373019 DEFB131AP59861 70 aa6.53□□□□□ -1.36
SF3A3-201ENST00000373019 PSPHP1O15172 72 aa6.53□□□□□ -1.36
SF3A3-201ENST00000373019 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
SF3A3-201ENST00000373019 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
SF3A3-201ENST00000373019 KRTAP1-3Q8IUG1 177 aa6.52□□□□□ -1.37
SF3A3-201ENST00000373019 PDE6GP18545 87 aa6.51□□□□□ -1.37
SF3A3-201ENST00000373019 LINC01006Q8NI28 216 aa6.51□□□□□ -1.37
SF3A3-201ENST00000373019 C11orf45Q8TAV5 145 aa6.51□□□□□ -1.37
SF3A3-201ENST00000373019 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
SF3A3-201ENST00000373019 A6NDX4 124 aa6.51□□□□□ -1.37
SF3A3-201ENST00000373019 H3BUX3 64 aa6.5□□□□□ -1.37
SF3A3-201ENST00000373019 TRGV1A0A0A0MS02 117 aa6.5□□□□□ -1.37
SF3A3-201ENST00000373019 Q6ZQY7 126 aa6.5□□□□□ -1.37
SF3A3-201ENST00000373019 STHQ8IWL8 128 aa6.5□□□□□ -1.37
SF3A3-201ENST00000373019 KHDC1LQ5JSQ8 128 aa6.49□□□□□ -1.37
SF3A3-201ENST00000373019 LINC00612Q8N6U2 182 aa6.49□□□□□ -1.37
SF3A3-201ENST00000373019 NOTCH1P46531 2555 aa6.49□□□□□ -1.37
SF3A3-201ENST00000373019 LOC100131303A0A0U1RQF7 123 aa6.49□□□□□ -1.37
SF3A3-201ENST00000373019 CR1P17927 2039 aa6.48□□□□□ -1.37
SF3A3-201ENST00000373019 LINC00959A0A1B0GUT2 108 aa6.47□□□□□ -1.37
SF3A3-201ENST00000373019 Q8IZM0 81 aa6.47□□□□□ -1.37
SF3A3-201ENST00000373019 RBM12B-AS1Q9P1G2 102 aa6.47□□□□□ -1.37
SF3A3-201ENST00000373019 SYCNQ0VAF6 134 aa6.47□□□□□ -1.37
SF3A3-201ENST00000373019 LCE6AA0A183 80 aa6.46□□□□□ -1.37
SF3A3-201ENST00000373019 C9orf116Q5BN46 136 aaPredicted RBP6.46□□□□□ -1.37
SF3A3-201ENST00000373019 INSP01308 110 aa6.45□□□□□ -1.38
SF3A3-201ENST00000373019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-201ENST00000373019 TRGV2A0A075B6R0 118 aa6.45□□□□□ -1.38
SF3A3-201ENST00000373019 A8MUN3 132 aa6.45□□□□□ -1.38
SF3A3-201ENST00000373019 KIAA0087Q14695 138 aa6.45□□□□□ -1.38
SF3A3-201ENST00000373019 LINC00588Q9Y4M8 146 aa6.45□□□□□ -1.38
SF3A3-201ENST00000373019 MXRA5Q9NR99 2828 aa6.44□□□□□ -1.38
SF3A3-201ENST00000373019 C10orf25Q5T742 122 aa6.44□□□□□ -1.38
SF3A3-201ENST00000373019 TRBV6-8A0A0A6YYG3 113 aa6.44□□□□□ -1.38
SF3A3-201ENST00000373019 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
SF3A3-201ENST00000373019 ZCCHC13Q8WW36 166 aaKnown RBP6.44□□□□□ -1.38
SF3A3-201ENST00000373019 MAP6D1Q9H9H5 199 aa6.44□□□□□ -1.38
SF3A3-201ENST00000373019 COX17Q14061 63 aa6.44□□□□□ -1.38
SF3A3-201ENST00000373019 PSCAO43653 123 aa6.43□□□□□ -1.38
SF3A3-201ENST00000373019 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
SF3A3-201ENST00000373019 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
SF3A3-201ENST00000373019 Q5VV11 94 aa6.43□□□□□ -1.38
SF3A3-201ENST00000373019 UBE2E2Q96LR5 201 aa6.43□□□□□ -1.38
SF3A3-201ENST00000373019 FAM30AQ9NZY2 134 aa6.43□□□□□ -1.38
SF3A3-201ENST00000373019 DEFB112Q30KQ8 113 aa6.43□□□□□ -1.38
SF3A3-201ENST00000373019 COX7BP24311 80 aa6.42□□□□□ -1.38
SF3A3-201ENST00000373019 CELA1Q9UNI1 258 aa6.42□□□□□ -1.38
SF3A3-201ENST00000373019 H3BS24 57 aa6.42□□□□□ -1.38
SF3A3-201ENST00000373019 TRGV4A0A0C4DH28 118 aa6.41□□□□□ -1.38
SF3A3-201ENST00000373019 SMIM29Q86T20 159 aa6.41□□□□□ -1.38
SF3A3-201ENST00000373019 ZNF469Q96JG9 3925 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-201ENST00000373019 IGHV4-28A0A0C4DH34 117 aa6.41□□□□□ -1.38
SF3A3-201ENST00000373019 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
SF3A3-201ENST00000373019 NOP10Q9NPE3 64 aaKnown RBP6.41□□□□□ -1.38
SF3A3-201ENST00000373019 C16orf90A8MZG2 172 aa6.4□□□□□ -1.38
SF3A3-201ENST00000373019 H3BQ85 93 aa6.4□□□□□ -1.38
SF3A3-201ENST00000373019 M0R378 163 aa6.4□□□□□ -1.38
SF3A3-201ENST00000373019 SLURP1P55000 103 aa6.4□□□□□ -1.39
SF3A3-201ENST00000373019 LINC00269Q8N2A0 174 aa6.4□□□□□ -1.39
SF3A3-201ENST00000373019 CYP4F30PQ9H0H9 118 aa6.4□□□□□ -1.39
SF3A3-201ENST00000373019 KLK12Q9UKR0 248 aa6.4□□□□□ -1.39
SF3A3-201ENST00000373019 IGHV4-59P01825 116 aa6.39□□□□□ -1.39
SF3A3-201ENST00000373019 ESM1Q9NQ30 184 aa6.39□□□□□ -1.39
SF3A3-201ENST00000373019 IGHV4-30-4P0DP06 118 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms