RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 V9GYV3 84 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 EYSQ5T1H1 3165 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 ZNF236Q9UL36 1845 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 PKD1L2Q7Z442 2459 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 PIEZO1Q92508 2521 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 SIPA1L3O60292 1781 aaPredicted RBP1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 BCORQ6W2J9 1755 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 A0A087WTM6 91 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 UQCRHLA0A096LP55 91 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 NDUFC1O43677 76 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 ALKAL2Q6UX46 152 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 CCL19Q99731 98 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 CDC42SE2Q9NRR3 84 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 HIGD1BQ9P298 99 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 LENEPQ9Y5L5 61 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 BRCA2P51587 3418 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 MRC1P22897 1456 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 LAMA3Q16787 3333 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 SCN7AQ01118 1682 aa1.04□□□□□ -2.24
SCAMP1-205ENST00000614488 LTN1O94822 1766 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 SCN11AQ9UI33 1791 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 LAMA4Q16363 1823 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 PRUNE2Q8WUY3 3088 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 NCOA6Q14686 2063 aaPredicted RBP1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 MYO7BQ6PIF6 2116 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 RANBP2P49792 3224 aaKnown RBP1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 MED13LQ71F56 2210 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 C10orf142B7Z368 130 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 H7BZZ5 65 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 COX6CP09669 75 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 TMEM170BQ5T4T1 132 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 Q6ZQY7 126 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 ZNF720Q7Z2F6 126 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 FAM223AQ8IWN6 122 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 S100A13Q99584 98 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 ARL2-SNX15V9GYD0 113 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 V9GYH0 126 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 EDC4Q6P2E9 1401 aaKnown RBP1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 CENPFP49454 3210 aa1.03□□□□□ -2.24
SCAMP1-205ENST00000614488 LAMA2P24043 3122 aaKnown RBP1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 HTTP42858 3142 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 IGLC7A0M8Q6 106 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 TMEM14DPA8MWL7 114 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 NCOR1O75376 2440 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 UQCRHP07919 91 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 CCL18P55774 89 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 CAV3P56539 151 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 KLKP1Q107X0 134 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 VMO1Q7Z5L0 202 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 DOT1LQ8TEK3 1739 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 PPP1R1CQ8WVI7 109 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 DCHS1Q96JQ0 3298 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 Q96NJ1 140 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 PLIN4Q96Q06 1357 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 R4GMQ9 66 aa1.02□□□□□ -2.25
SCAMP1-205ENST00000614488 KIF20BQ96Q89 1820 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 TJP1Q07157 1748 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 TRGV1A0A0A0MS02 117 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 CTXND1A0A1B0GTU2 59 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 LOC285095A0A1B0GVY8 99 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 F8VRH5 84 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 M0R135 149 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 NCR3O14931 201 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 EFNA4P52798 201 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 ETDBQ3ZM63 59 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 WFDC6Q9BQY6 131 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 TMEM14BQ9NUH8 114 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 SPCS1Q9Y6A9 102 aa1.01□□□□□ -2.25
SCAMP1-205ENST00000614488 DUOX1Q9NRD9 1551 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 NFAT5O94916 1531 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 ANKRD50Q9ULJ7 1429 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 TRBV25-1A0A075B6N4 114 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 TRAV1-2A0A0B4J238 106 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 TRBV30A0A0K0K1B3 111 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 M0R3E3 92 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 ACYP2P14621 99 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 WFDC2Q14508 124 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 PMCHL1Q16048 86 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 NMSQ5H8A3 153 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 ZFHX4Q86UP3 3567 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 ABCA1O95477 2261 aa1□□□□□ -2.25
SCAMP1-205ENST00000614488 TTC28Q96AY4 2481 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 CACNA1BQ00975 2339 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 USP34Q70CQ2 3546 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 FAM223BA6NKX1 122 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 ZNF815PA8K554 130 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 ADIRFQ15847 76 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 PSMG4Q5JS54 123 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 C6orf52Q5T4I8 152 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 BAGE3Q86Y29 109 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 BAGE2Q86Y30 109 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 DEFB123Q8N688 67 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 FDCSPQ8NFU4 85 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 PRR15LQ9BU68 103 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 ST20Q9HBF5 79 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 RABAC1Q9UI14 185 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 LINC01558Q9Y6Z2 57 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 ZFHX3Q15911 3703 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 CDH23Q9H251 3354 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 MYO7AQ13402 2215 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms