RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 FRYQ5TBA9 3013 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 ASPMQ8IZT6 3477 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 NIPBLQ6KC79 2804 aaeCLIP0.54□□□□□ -2.32
LINC00557-201ENST00000563184 C2CD3Q4AC94 2353 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 EDC4Q6P2E9 1401 aaKnown RBP0.54□□□□□ -2.32
LINC00557-201ENST00000563184 CHD9Q3L8U1 2897 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 XIRP2A4UGR9 3374 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 CDH23Q9H251 3354 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 DNAH14Q0VDD8 3507 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 DNAH12Q6ZR08 3092 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 STAB1Q9NY15 2570 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 IGSF10Q6WRI0 2623 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 NRXN3Q9Y4C0 1643 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 DCHS1Q96JQ0 3298 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 NHSQ6T4R5 1651 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 CDC42BPAQ5VT25 1732 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 SPG11Q96JI7 2443 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 TRPM7Q96QT4 1865 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 TRBV7-3A0A075B6L6 115 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 OOSP1A8MZH6 123 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 PIN1P1O15428 100 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 TFF1P04155 84 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 S100A8P05109 93 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 SPINK8P0C7L1 97 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 LINC00032P0C843 101 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 INSL4Q14641 139 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 VMO1Q7Z5L0 202 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 SMIM4Q8WVI0 70 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 MGST2Q99735 147 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 ATRQ13535 2644 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 ESPL1Q14674 2120 aa0.53□□□□□ -2.32
LINC00557-201ENST00000563184 LAMA5O15230 3695 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 PCNX1Q96RV3 2341 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 SPTBN2O15020 2390 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 WDFY4Q6ZS81 3184 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 MAP1BP46821 2468 aaKnown RBP0.53□□□□□ -2.33
LINC00557-201ENST00000563184 PLCH1Q4KWH8 1693 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 TOPAZ1Q8N9V7 1692 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 ALS2Q96Q42 1657 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 JMJD1CQ15652 2540 aa0.53□□□□□ -2.33
LINC00557-201ENST00000563184 TLN1Q9Y490 2541 aaKnown RBP0.53□□□□□ -2.33
LINC00557-201ENST00000563184 USP9YO00507 2555 aaPredicted RBP0.52□□□□□ -2.33
LINC00557-201ENST00000563184 NALCNQ8IZF0 1738 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 MYO15AQ9UKN7 3530 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 TENM4Q6N022 2769 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 NBEAQ8NFP9 2946 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 FRYLO94915 3013 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 DMXL2Q8TDJ6 3036 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 A0A087WTM6 91 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 CLPSL1A2RUU4 121 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 NAP1L6A6NFF2 107 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 TMEM14DPA8MWL7 114 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 LOC730098B7Z3J9 87 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 PPP1R17O96001 155 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 SMIM5Q71RC9 77 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 SMIM11BQ8TCY0 68 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 PROK2Q9HC23 129 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 DYNLRB1Q9NP97 96 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 AP4S1Q9Y587 144 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 CENPEQ02224 2701 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 PKD1L1Q8TDX9 2849 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 DMXL1Q9Y485 3027 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 ZNF831Q5JPB2 1677 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 C4AP0C0L4 1744 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 PKD1L3Q7Z443 1732 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 FMN2Q9NZ56 1722 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 ARFGEF1Q9Y6D6 1849 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 PI4KAP42356 2102 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 MYO7AQ13402 2215 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 IGF2RP11717 2491 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
LINC00557-201ENST00000563184 ITPR2Q14571 2701 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 CHD7Q9P2D1 2997 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 SPEGQ15772 3267 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 NBASA2RRP1 2371 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 M0R143 59 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 PLXNA2O75051 1894 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 NFAT5O94916 1531 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 C5P01031 1676 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 C4BP0C0L5 1744 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 LRBAP50851 2863 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 SPAG11BQ08648 103 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 FREM2Q5SZK8 3169 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 TMEM170BQ5T4T1 132 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 SPAG11AQ6PDA7 123 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 RBBP6Q7Z6E9 1792 aaKnown RBP0.51□□□□□ -2.33
LINC00557-201ENST00000563184 SBF2Q86WG5 1849 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 ANKHD1Q8IWZ3 2542 aaKnown RBP0.51□□□□□ -2.33
LINC00557-201ENST00000563184 VPS13AQ96RL7 3174 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 COL12A1Q99715 3063 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 FAM103A1Q9BTL3 118 aaKnown RBP0.51□□□□□ -2.33
LINC00557-201ENST00000563184 PRR15LQ9BU68 103 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 PAPPA2Q9BXP8 1791 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 ASXL3Q9C0F0 2248 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 UQCR10Q9UDW1 63 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 DLEC1Q9Y238 1755 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 V9GYH0 126 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 OTOGQ6ZRI0 2925 aa0.51□□□□□ -2.33
LINC00557-201ENST00000563184 COL6A5A8TX70 2615 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms