RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 KMT2BQ9UMN6 2715 aaPredicted RBP1.71□□□□□ -2.14
KTN1-220ENST00000555172 UNC79Q9P2D8 2635 aa1.71□□□□□ -2.14
KTN1-220ENST00000555172 CACNA1CQ13936 2221 aa1.71□□□□□ -2.14
KTN1-220ENST00000555172 COL4A4P53420 1690 aaPredicted RBP1.71□□□□□ -2.14
KTN1-220ENST00000555172 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
KTN1-220ENST00000555172 GNG13Q9P2W3 67 aa1.7□□□□□ -2.14
KTN1-220ENST00000555172 CACNA1BQ00975 2339 aa1.7□□□□□ -2.14
KTN1-220ENST00000555172 TECTAO75443 2155 aa1.7□□□□□ -2.14
KTN1-220ENST00000555172 FXYD6-FXYD2A0A087WZ82 144 aa1.7□□□□□ -2.14
KTN1-220ENST00000555172 Q6ZRX8 168 aa1.7□□□□□ -2.14
KTN1-220ENST00000555172 KNTC1P50748 2209 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 RGPD1P0DJD0 1748 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 NHSL1Q5SYE7 1610 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 A0A096LNT2 108 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 G3V318 75 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 NCR3O14931 201 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 PRB1P04280 392 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
KTN1-220ENST00000555172 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
KTN1-220ENST00000555172 KRTAP10-10P60014 251 aa1.68□□□□□ -2.14
KTN1-220ENST00000555172 COX17Q14061 63 aa1.68□□□□□ -2.14
KTN1-220ENST00000555172 CEP170BQ9Y4F5 1589 aaPredicted RBP1.68□□□□□ -2.14
KTN1-220ENST00000555172 ABCA10Q8WWZ4 1543 aa1.68□□□□□ -2.14
KTN1-220ENST00000555172 A0A1B0GUT8 65 aa1.68□□□□□ -2.14
KTN1-220ENST00000555172 HAMPP81172 84 aa1.68□□□□□ -2.14
KTN1-220ENST00000555172 TARBP1Q13395 1621 aaKnown RBP1.68□□□□□ -2.14
KTN1-220ENST00000555172 SHPRHQ149N8 1683 aa1.68□□□□□ -2.14
KTN1-220ENST00000555172 ZNF831Q5JPB2 1677 aa1.68□□□□□ -2.14
KTN1-220ENST00000555172 CRYBG1Q9Y4K1 1723 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 ANKRD17O75179 2603 aaKnown RBP1.67□□□□□ -2.14
KTN1-220ENST00000555172 DIP2AQ14689 1571 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
KTN1-220ENST00000555172 HMGA1P17096 107 aaKnown RBP1.67□□□□□ -2.14
KTN1-220ENST00000555172 ATP5EP2Q5VTU8 51 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 FAM103A1Q9BTL3 118 aaKnown RBP1.67□□□□□ -2.14
KTN1-220ENST00000555172 C1orf167Q5SNV9 1468 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 UBR3Q6ZT12 1888 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 TRAV21A0A0B4J279 112 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 LCE3DQ9BYE3 92 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 NUP188Q5SRE5 1749 aa1.67□□□□□ -2.14
KTN1-220ENST00000555172 FBN1P35555 2871 aaKnown RBP1.66□□□□□ -2.14
KTN1-220ENST00000555172 ATP7BP35670 1465 aa1.66□□□□□ -2.14
KTN1-220ENST00000555172 CDC42BPGQ6DT37 1551 aa1.66□□□□□ -2.14
KTN1-220ENST00000555172 C10orf99Q6UWK7 81 aa1.66□□□□□ -2.14
KTN1-220ENST00000555172 CD163L1Q9NR16 1453 aa1.66□□□□□ -2.14
KTN1-220ENST00000555172 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.14
KTN1-220ENST00000555172 SMIM11BQ8TCY0 68 aa1.65□□□□□ -2.14
KTN1-220ENST00000555172 LMTK2Q8IWU2 1503 aa1.65□□□□□ -2.15
KTN1-220ENST00000555172 SSC5DA1L4H1 1573 aa1.65□□□□□ -2.15
KTN1-220ENST00000555172 LRP6O75581 1613 aa1.65□□□□□ -2.15
KTN1-220ENST00000555172 ABCA9Q8IUA7 1624 aa1.65□□□□□ -2.15
KTN1-220ENST00000555172 FLG2Q5D862 2391 aaPredicted RBP1.65□□□□□ -2.15
KTN1-220ENST00000555172 NKTRP30414 1462 aaKnown RBP1.65□□□□□ -2.15
KTN1-220ENST00000555172 SSBP3-AS1Q7Z2R9 100 aa1.65□□□□□ -2.15
KTN1-220ENST00000555172 PIK3C2BO00750 1634 aa1.64□□□□□ -2.15
KTN1-220ENST00000555172 RALGAPBQ86X10 1494 aa1.64□□□□□ -2.15
KTN1-220ENST00000555172 LINC00959A0A1B0GUT2 108 aa1.64□□□□□ -2.15
KTN1-220ENST00000555172 DEFB112Q30KQ8 113 aa1.64□□□□□ -2.15
KTN1-220ENST00000555172 WFDC9Q8NEX5 89 aa1.64□□□□□ -2.15
KTN1-220ENST00000555172 A0A1B0GU69 56 aa1.63□□□□□ -2.15
KTN1-220ENST00000555172 ATXN8Q156A1 80 aa1.63□□□□□ -2.15
KTN1-220ENST00000555172 SMIM5Q71RC9 77 aa1.63□□□□□ -2.15
KTN1-220ENST00000555172 MAP2P11137 1827 aaKnown RBP1.63□□□□□ -2.15
KTN1-220ENST00000555172 C5P01031 1676 aa1.63□□□□□ -2.15
KTN1-220ENST00000555172 CCDC180Q9P1Z9 1646 aa1.63□□□□□ -2.15
KTN1-220ENST00000555172 PREX2Q70Z35 1606 aa1.62□□□□□ -2.15
KTN1-220ENST00000555172 RAPGEF6Q8TEU7 1601 aa1.62□□□□□ -2.15
KTN1-220ENST00000555172 URB2Q14146 1524 aaKnown RBP1.62□□□□□ -2.15
KTN1-220ENST00000555172 NREPQ16612 68 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 GAFA1Q96PS6 74 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 PAPPA2Q9BXP8 1791 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 GOLGA4Q13439 2230 aaKnown RBP1.61□□□□□ -2.15
KTN1-220ENST00000555172 PKD1L3Q7Z443 1732 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 RPL37P61927 97 aaKnown RBP1.61□□□□□ -2.15
KTN1-220ENST00000555172 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 LINC00575Q6W349 94 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 PREX1Q8TCU6 1659 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 USP32Q8NFA0 1604 aa1.61□□□□□ -2.15
KTN1-220ENST00000555172 ALKQ9UM73 1620 aa1.6□□□□□ -2.15
KTN1-220ENST00000555172 PLXNC1O60486 1568 aa1.6□□□□□ -2.15
KTN1-220ENST00000555172 SAMD9Q5K651 1589 aa1.6□□□□□ -2.15
KTN1-220ENST00000555172 XRN1Q8IZH2 1706 aaKnown RBP1.6□□□□□ -2.15
KTN1-220ENST00000555172 PAPPAQ13219 1627 aa1.6□□□□□ -2.15
KTN1-220ENST00000555172 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
KTN1-220ENST00000555172 LINC01549A6NIU2 74 aa1.59□□□□□ -2.15
KTN1-220ENST00000555172 FMN2Q9NZ56 1722 aa1.59□□□□□ -2.15
KTN1-220ENST00000555172 PRXQ9BXM0 1461 aa1.59□□□□□ -2.15
KTN1-220ENST00000555172 AHCTF1Q8WYP5 2266 aa1.59□□□□□ -2.16
KTN1-220ENST00000555172 TRBV6-1A0A0K0K1D8 114 aa1.59□□□□□ -2.16
KTN1-220ENST00000555172 NDUFB1O75438 58 aa1.59□□□□□ -2.16
KTN1-220ENST00000555172 LRRC7Q96NW7 1537 aa1.59□□□□□ -2.16
KTN1-220ENST00000555172 NESP48681 1621 aa1.59□□□□□ -2.16
KTN1-220ENST00000555172 TIAM2Q8IVF5 1701 aa1.58□□□□□ -2.16
KTN1-220ENST00000555172 GLI2P10070 1586 aa1.58□□□□□ -2.16
KTN1-220ENST00000555172 KIF1AQ12756 1690 aa1.58□□□□□ -2.16
KTN1-220ENST00000555172 SPINK13Q1W4C9 94 aa1.58□□□□□ -2.16
KTN1-220ENST00000555172 TIAM1Q13009 1591 aa1.57□□□□□ -2.16
KTN1-220ENST00000555172 SORL1Q92673 2214 aa1.57□□□□□ -2.16
KTN1-220ENST00000555172 LRRC37A2A6NM11 1700 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms