RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 C19orf84I3L1E1 186 aa5.38□□□□□ -1.55
PTPRK-219ENST00000531050 C11orf71Q6IPW1 123 aa5.38□□□□□ -1.55
PTPRK-219ENST00000531050 PRM2P04554 102 aa5.37□□□□□ -1.55
PTPRK-219ENST00000531050 UBE2BP63146 152 aa5.37□□□□□ -1.55
PTPRK-219ENST00000531050 NCOR2Q9Y618 2525 aa5.37□□□□□ -1.55
PTPRK-219ENST00000531050 RELNP78509 3460 aa5.37□□□□□ -1.55
PTPRK-219ENST00000531050 SVEP1Q4LDE5 3571 aa5.37□□□□□ -1.55
PTPRK-219ENST00000531050 HTN1P15515 57 aa5.37□□□□□ -1.55
PTPRK-219ENST00000531050 PRR3P79522 188 aaKnown RBP5.37□□□□□ -1.55
PTPRK-219ENST00000531050 SPTBN1Q01082 2364 aaKnown RBP5.37□□□□□ -1.55
PTPRK-219ENST00000531050 TLN1Q9Y490 2541 aaKnown RBP5.36□□□□□ -1.55
PTPRK-219ENST00000531050 DOPEY2Q9Y3R5 2298 aa5.36□□□□□ -1.55
PTPRK-219ENST00000531050 IGHV3-11P01762 117 aa5.36□□□□□ -1.55
PTPRK-219ENST00000531050 Q5VV11 94 aa5.36□□□□□ -1.55
PTPRK-219ENST00000531050 Q8N9L7 120 aa5.36□□□□□ -1.55
PTPRK-219ENST00000531050 SPATA3Q8NHX4 192 aa5.36□□□□□ -1.55
PTPRK-219ENST00000531050 ANKHD1Q8IWZ3 2542 aaKnown RBP5.36□□□□□ -1.55
PTPRK-219ENST00000531050 C11orf44Q8N8P7 122 aa5.36□□□□□ -1.55
PTPRK-219ENST00000531050 CACNA1AO00555 2505 aa5.36□□□□□ -1.55
PTPRK-219ENST00000531050 IGKV4-1P06312 121 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 LINC00575Q6W349 94 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 C5orf56Q8N8D9 126 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 MUC7Q8TAX7 377 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 C16orf90A8MZG2 172 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 PDE6GP18545 87 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 LINC01006Q8NI28 216 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 DCHS2Q6V1P9 2916 aa5.35□□□□□ -1.55
PTPRK-219ENST00000531050 LYRM9A8MSI8 78 aa5.34□□□□□ -1.55
PTPRK-219ENST00000531050 PSCAO43653 123 aa5.34□□□□□ -1.55
PTPRK-219ENST00000531050 CHD8Q9HCK8 2581 aa5.34□□□□□ -1.55
PTPRK-219ENST00000531050 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.56
PTPRK-219ENST00000531050 C6orf99Q4VX62 202 aa5.34□□□□□ -1.56
PTPRK-219ENST00000531050 LINC00269Q8N2A0 174 aa5.34□□□□□ -1.56
PTPRK-219ENST00000531050 SORL1Q92673 2214 aa5.34□□□□□ -1.56
PTPRK-219ENST00000531050 IGF2RP11717 2491 aa5.33□□□□□ -1.56
PTPRK-219ENST00000531050 ESM1Q9NQ30 184 aa5.33□□□□□ -1.56
PTPRK-219ENST00000531050 HRNRQ86YZ3 2850 aaPredicted RBP5.33□□□□□ -1.56
PTPRK-219ENST00000531050 LCE6AA0A183 80 aa5.33□□□□□ -1.56
PTPRK-219ENST00000531050 A6NN06 94 aa5.33□□□□□ -1.56
PTPRK-219ENST00000531050 NDUFS5O43920 106 aa5.33□□□□□ -1.56
PTPRK-219ENST00000531050 ZFP36P26651 326 aaKnown RBP5.33□□□□□ -1.56
PTPRK-219ENST00000531050 LMO4P61968 165 aa5.33□□□□□ -1.56
PTPRK-219ENST00000531050 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
PTPRK-219ENST00000531050 A0A1W2PPR1 153 aa5.32□□□□□ -1.56
PTPRK-219ENST00000531050 C8orf87E5RJ46 101 aa5.32□□□□□ -1.56
PTPRK-219ENST00000531050 ZNF73O43830 326 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-219ENST00000531050 IGHV4-38-2P0DP08 117 aa5.32□□□□□ -1.56
PTPRK-219ENST00000531050 LINC00612Q8N6U2 182 aa5.32□□□□□ -1.56
PTPRK-219ENST00000531050 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
PTPRK-219ENST00000531050 LRBAP50851 2863 aa5.32□□□□□ -1.56
PTPRK-219ENST00000531050 IGHV3OR16-9A0A0B4J2B5 98 aa5.31□□□□□ -1.56
PTPRK-219ENST00000531050 UBE2AP49459 152 aa5.31□□□□□ -1.56
PTPRK-219ENST00000531050 A8MTW9 85 aa5.31□□□□□ -1.56
PTPRK-219ENST00000531050 H3BS24 57 aa5.31□□□□□ -1.56
PTPRK-219ENST00000531050 K7EMT4 169 aa5.31□□□□□ -1.56
PTPRK-219ENST00000531050 USMG5Q96IX5 58 aa5.31□□□□□ -1.56
PTPRK-219ENST00000531050 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
PTPRK-219ENST00000531050 TRBV6-8A0A0A6YYG3 113 aa5.3□□□□□ -1.56
PTPRK-219ENST00000531050 SPTSSBQ8NFR3 76 aa5.3□□□□□ -1.56
PTPRK-219ENST00000531050 IGLV4-60A0A075B6I1 120 aa5.3□□□□□ -1.56
PTPRK-219ENST00000531050 ATP11AUNQ6ZP68 121 aa5.3□□□□□ -1.56
PTPRK-219ENST00000531050 CHKB-CPT1BH3BT56 60 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 Q6ZQY7 126 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 LCA10Q71F78 164 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 Q8NDZ9 215 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 FAM30AQ9NZY2 134 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 IGKV3OR2-268A0A0C4DH90 116 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 HCG22E2RYF7 251 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 UBE2L6O14933 153 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 C10orf25Q5T742 122 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 SPTA1P02549 2419 aa5.29□□□□□ -1.56
PTPRK-219ENST00000531050 CELA1Q9UNI1 258 aa5.28□□□□□ -1.56
PTPRK-219ENST00000531050 ACACBO00763 2458 aa5.28□□□□□ -1.56
PTPRK-219ENST00000531050 PRR4Q16378 134 aa5.28□□□□□ -1.56
PTPRK-219ENST00000531050 ATRXP46100 2492 aa5.27□□□□□ -1.57
PTPRK-219ENST00000531050 H3BUA1 57 aa5.27□□□□□ -1.57
PTPRK-219ENST00000531050 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.27□□□□□ -1.57
PTPRK-219ENST00000531050 C7orf65Q6ZTY9 151 aa5.27□□□□□ -1.57
PTPRK-219ENST00000531050 SMIM29Q86T20 159 aa5.27□□□□□ -1.57
PTPRK-219ENST00000531050 DIRC1Q969H9 104 aa5.27□□□□□ -1.57
PTPRK-219ENST00000531050 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
PTPRK-219ENST00000531050 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
PTPRK-219ENST00000531050 PLA2G2AP14555 144 aa5.26□□□□□ -1.57
PTPRK-219ENST00000531050 PRB2P02812 416 aaPredicted RBP5.26□□□□□ -1.57
PTPRK-219ENST00000531050 NBASA2RRP1 2371 aa5.25□□□□□ -1.57
PTPRK-219ENST00000531050 AKAP6Q13023 2319 aa5.25□□□□□ -1.57
PTPRK-219ENST00000531050 H3BQ85 93 aa5.25□□□□□ -1.57
PTPRK-219ENST00000531050 COX7BP24311 80 aa5.25□□□□□ -1.57
PTPRK-219ENST00000531050 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
PTPRK-219ENST00000531050 ITPR1Q14643 2758 aa5.25□□□□□ -1.57
PTPRK-219ENST00000531050 TRGV2A0A075B6R0 118 aa5.25□□□□□ -1.57
PTPRK-219ENST00000531050 COL6A6A6NMZ7 2263 aa5.24□□□□□ -1.57
PTPRK-219ENST00000531050 IGLV1-40P01703 118 aa5.24□□□□□ -1.57
PTPRK-219ENST00000531050 USP24Q9UPU5 2620 aa5.24□□□□□ -1.57
PTPRK-219ENST00000531050 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.24□□□□□ -1.57
PTPRK-219ENST00000531050 PKD1L2Q7Z442 2459 aa5.24□□□□□ -1.57
PTPRK-219ENST00000531050 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
PTPRK-219ENST00000531050 HIVEP3Q5T1R4 2406 aa5.24□□□□□ -1.57
PTPRK-219ENST00000531050 ASH1LQ9NR48 2969 aaKnown RBP5.23□□□□□ -1.57
PTPRK-219ENST00000531050 Q8IZM0 81 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms