RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 IGKV4-1P06312 121 aa5.58□□□□□ -1.52
CSDE1-214ENST00000530886 PLA2G2AP14555 144 aa5.58□□□□□ -1.52
CSDE1-214ENST00000530886 TOMM7Q9P0U1 55 aa5.58□□□□□ -1.52
CSDE1-214ENST00000530886 SPTBN1Q01082 2364 aaKnown RBP5.58□□□□□ -1.52
CSDE1-214ENST00000530886 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-214ENST00000530886 PTPRQQ9UMZ3 2332 aa5.58□□□□□ -1.52
CSDE1-214ENST00000530886 A0A1W2PPR1 153 aa5.58□□□□□ -1.52
CSDE1-214ENST00000530886 Q8IZM0 81 aa5.58□□□□□ -1.52
CSDE1-214ENST00000530886 TRAV22A0A0B4J277 110 aa5.57□□□□□ -1.52
CSDE1-214ENST00000530886 UBE2L6O14933 153 aa5.57□□□□□ -1.52
CSDE1-214ENST00000530886 PRM2P04554 102 aa5.57□□□□□ -1.52
CSDE1-214ENST00000530886 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
CSDE1-214ENST00000530886 LINC00588Q9Y4M8 146 aa5.57□□□□□ -1.52
CSDE1-214ENST00000530886 ANKHD1Q8IWZ3 2542 aaKnown RBP5.57□□□□□ -1.52
CSDE1-214ENST00000530886 C6orf99Q4VX62 202 aa5.57□□□□□ -1.52
CSDE1-214ENST00000530886 C1orf64Q8NEQ6 169 aa5.57□□□□□ -1.52
CSDE1-214ENST00000530886 MAP1AP78559 2803 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-214ENST00000530886 IGHV4-30-2A0A087WSY4 118 aa5.56□□□□□ -1.52
CSDE1-214ENST00000530886 UBE2BP63146 152 aa5.56□□□□□ -1.52
CSDE1-214ENST00000530886 TPRP12270 2363 aaKnown RBP5.56□□□□□ -1.52
CSDE1-214ENST00000530886 CHD6Q8TD26 2715 aa5.56□□□□□ -1.52
CSDE1-214ENST00000530886 A6NDX4 124 aa5.56□□□□□ -1.52
CSDE1-214ENST00000530886 MXRA5Q9NR99 2828 aa5.56□□□□□ -1.52
CSDE1-214ENST00000530886 HIGD2AQ9BW72 106 aa5.55□□□□□ -1.52
CSDE1-214ENST00000530886 TRIOBPQ9H2D6 2365 aa5.55□□□□□ -1.52
CSDE1-214ENST00000530886 HTN1P15515 57 aa5.55□□□□□ -1.52
CSDE1-214ENST00000530886 STHQ8IWL8 128 aa5.55□□□□□ -1.52
CSDE1-214ENST00000530886 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
CSDE1-214ENST00000530886 IGHV4-28A0A0C4DH34 117 aa5.54□□□□□ -1.52
CSDE1-214ENST00000530886 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
CSDE1-214ENST00000530886 CR1P17927 2039 aa5.54□□□□□ -1.52
CSDE1-214ENST00000530886 NDUFS5O43920 106 aa5.54□□□□□ -1.52
CSDE1-214ENST00000530886 INSP01308 110 aa5.54□□□□□ -1.52
CSDE1-214ENST00000530886 RNASE1P07998 156 aaKnown RBP5.54□□□□□ -1.52
CSDE1-214ENST00000530886 COX7BP24311 80 aa5.54□□□□□ -1.52
CSDE1-214ENST00000530886 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-214ENST00000530886 CELA1Q9UNI1 258 aa5.54□□□□□ -1.52
CSDE1-214ENST00000530886 PSCAO43653 123 aa5.53□□□□□ -1.52
CSDE1-214ENST00000530886 PHF5AQ7RTV0 110 aaKnown RBP5.53□□□□□ -1.52
CSDE1-214ENST00000530886 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
CSDE1-214ENST00000530886 PRR3P79522 188 aaKnown RBP5.52□□□□□ -1.53
CSDE1-214ENST00000530886 SCXQ7RTU7 201 aa5.52□□□□□ -1.53
CSDE1-214ENST00000530886 EP300Q09472 2414 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-214ENST00000530886 IGHV4-59P01825 116 aa5.52□□□□□ -1.53
CSDE1-214ENST00000530886 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 LINC00959A0A1B0GUT2 108 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 C19orf84I3L1E1 186 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 M0R378 163 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 CCL24O00175 119 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 Q5VV11 94 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 LINC01356Q8N9X3 169 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 OTOGLQ3ZCN5 2332 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 UBE2AP49459 152 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 Q6ZQY7 126 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 IGHV4-30-4P0DP06 118 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 DEFB131AP59861 70 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 DEFB124Q8NES8 71 aa5.51□□□□□ -1.53
CSDE1-214ENST00000530886 NIPBLQ6KC79 2804 aaeCLIP5.51□□□□□ -1.539e-7■■□□□ 11.9
CSDE1-214ENST00000530886 PSPHP1O15172 72 aa5.5□□□□□ -1.53
CSDE1-214ENST00000530886 A0A1B0GW54 56 aa5.5□□□□□ -1.53
CSDE1-214ENST00000530886 ATP11AUNQ6ZP68 121 aa5.5□□□□□ -1.53
CSDE1-214ENST00000530886 LINC01006Q8NI28 216 aa5.5□□□□□ -1.53
CSDE1-214ENST00000530886 CACNA1HO95180 2353 aa5.5□□□□□ -1.53
CSDE1-214ENST00000530886 LOC100131303A0A0U1RQF7 123 aa5.5□□□□□ -1.53
CSDE1-214ENST00000530886 KIAA0087Q14695 138 aa5.5□□□□□ -1.53
CSDE1-214ENST00000530886 Q8NDZ9 215 aa5.49□□□□□ -1.53
CSDE1-214ENST00000530886 IGHV4-61A0A0C4DH41 118 aa5.49□□□□□ -1.53
CSDE1-214ENST00000530886 ADORA2A-AS1P86434 159 aa5.49□□□□□ -1.53
CSDE1-214ENST00000530886 LINC00612Q8N6U2 182 aa5.49□□□□□ -1.53
CSDE1-214ENST00000530886 TRGV1A0A0A0MS02 117 aa5.49□□□□□ -1.53
CSDE1-214ENST00000530886 ELOF1P60002 83 aaKnown RBP5.49□□□□□ -1.53
CSDE1-214ENST00000530886 C10orf99Q6UWK7 81 aa5.49□□□□□ -1.53
CSDE1-214ENST00000530886 A6NN06 94 aa5.48□□□□□ -1.53
CSDE1-214ENST00000530886 C4orf48Q5BLP8 95 aa5.48□□□□□ -1.53
CSDE1-214ENST00000530886 SORL1Q92673 2214 aa5.48□□□□□ -1.53
CSDE1-214ENST00000530886 TRGV2A0A075B6R0 118 aa5.48□□□□□ -1.53
CSDE1-214ENST00000530886 A8MUN3 132 aa5.48□□□□□ -1.53
CSDE1-214ENST00000530886 LINC00269Q8N2A0 174 aa5.47□□□□□ -1.53
CSDE1-214ENST00000530886 LIMD2Q9BT23 127 aa5.47□□□□□ -1.53
CSDE1-214ENST00000530886 MAP6D1Q9H9H5 199 aa5.47□□□□□ -1.53
CSDE1-214ENST00000530886 A0A1B0GUV1 79 aa5.47□□□□□ -1.53
CSDE1-214ENST00000530886 C16orf90A8MZG2 172 aa5.47□□□□□ -1.53
CSDE1-214ENST00000530886 H3BUX3 64 aa5.47□□□□□ -1.53
CSDE1-214ENST00000530886 NDUFB1O75438 58 aa5.47□□□□□ -1.53
CSDE1-214ENST00000530886 SETXQ7Z333 2677 aaKnown RBP5.47□□□□□ -1.53
CSDE1-214ENST00000530886 LY6EQ16553 131 aa5.46□□□□□ -1.53
CSDE1-214ENST00000530886 BRD3OSQ6XYD6 125 aa5.46□□□□□ -1.53
CSDE1-214ENST00000530886 Q8N9L7 120 aa5.46□□□□□ -1.53
CSDE1-214ENST00000530886 COL6A6A6NMZ7 2263 aa5.46□□□□□ -1.54
CSDE1-214ENST00000530886 MAP1BP46821 2468 aaKnown RBP5.46□□□□□ -1.54
CSDE1-214ENST00000530886 LRCOL1A6NCL2 159 aa5.46□□□□□ -1.54
CSDE1-214ENST00000530886 TRGV4A0A0C4DH28 118 aa5.45□□□□□ -1.54
CSDE1-214ENST00000530886 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
CSDE1-214ENST00000530886 DIRC1Q969H9 104 aa5.45□□□□□ -1.54
CSDE1-214ENST00000530886 ZANQ9Y493 2812 aa5.45□□□□□ -1.54
CSDE1-214ENST00000530886 TLN1Q9Y490 2541 aaKnown RBP5.45□□□□□ -1.54
CSDE1-214ENST00000530886 IGKV3OR2-268A0A0C4DH90 116 aa5.44□□□□□ -1.54
CSDE1-214ENST00000530886 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
CSDE1-214ENST00000530886 Q75L30 129 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms