RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TRBV30A0A0K0K1B3 111 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 H3BT86 120 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 J3QQQ9 107 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 M0R2P5 195 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 IGKV4-1P06312 121 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 PRB4P10163 310 aaPredicted RBP2.93□□□□□ -1.94
SKP1-213ENST00000524288 SCGB1D4Q6XE38 83 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 BRD3OSQ6XYD6 125 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 C5orf56Q8N8D9 126 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 SPANXDQ9BXN6 97 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 SPANXCQ9NY87 97 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 TP53TG1Q9Y2A0 90 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 DCHS1Q96JQ0 3298 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 ABCA4P78363 2273 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 SPENQ96T58 3664 aaKnown RBP2.92□□□□□ -1.94
SKP1-213ENST00000524288 LOC107984156A0A0G2JMH3 177 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 SLC25A20O43772 301 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 TIMM17BO60830 172 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 P0C880 135 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 ZNF22P17026 224 aaPredicted RBP2.92□□□□□ -1.94
SKP1-213ENST00000524288 ATXN8Q156A1 80 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 SCXQ7RTU7 201 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 ARL17AQ8IVW1 177 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 USMG5Q96IX5 58 aa2.92□□□□□ -1.94
SKP1-213ENST00000524288 HRNRQ86YZ3 2850 aaPredicted RBP2.92□□□□□ -1.94
SKP1-213ENST00000524288 RP1L1Q8IWN7 2480 aaPredicted RBP2.92□□□□□ -1.94
SKP1-213ENST00000524288 CACNA1AO00555 2505 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 TRAV41A0A0B4J266 112 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 TRBV7-7A0A0K0K1E9 115 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 TRBV10-2A0A0K0K1G8 114 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 TINCRA0A1B0GVN0 87 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 A8MTW9 85 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 NPFFO15130 113 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 MGPP08493 103 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 LGALS3P17931 250 aaKnown RBP2.91□□□□□ -1.94
SKP1-213ENST00000524288 S100A4P26447 101 aaKnown RBP2.91□□□□□ -1.94
SKP1-213ENST00000524288 DEFB113Q30KQ7 82 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 TEX29Q8N6K0 151 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 Q8NAQ8 132 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 PTH2Q96A98 100 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 CCL19Q99731 98 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 LINC00527Q9UJ94 153 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 WNK2Q9Y3S1 2297 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 AKAP13Q12802 2813 aa2.91□□□□□ -1.94
SKP1-213ENST00000524288 C9JAW5 83 aa2.9□□□□□ -1.95
SKP1-213ENST00000524288 G3V318 75 aa2.9□□□□□ -1.95
SKP1-213ENST00000524288 M0QY20 66 aa2.9□□□□□ -1.95
SKP1-213ENST00000524288 LST1O00453 97 aa2.9□□□□□ -1.95
SKP1-213ENST00000524288 IFITM1P13164 125 aa2.9□□□□□ -1.95
SKP1-213ENST00000524288 RPL39P62891 51 aaKnown RBP2.9□□□□□ -1.95
SKP1-213ENST00000524288 MRPS36P82909 103 aaKnown RBP2.9□□□□□ -1.95
SKP1-213ENST00000524288 MIAQ16674 131 aa2.9□□□□□ -1.95
SKP1-213ENST00000524288 TPRP12270 2363 aaKnown RBP2.89□□□□□ -1.95
SKP1-213ENST00000524288 NCOR2Q9Y618 2525 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 F5H768 121 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 GNRH2O43555 120 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 SNCGO76070 127 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 TMEM170BQ5T4T1 132 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 SDIM1Q6ZPB5 146 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 DCANP1Q8TF63 244 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 SPTBN4Q9H254 2564 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 COL6A6A6NMZ7 2263 aa2.89□□□□□ -1.95
SKP1-213ENST00000524288 CELSR3Q9NYQ7 3312 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 TRAV4A0A0B4J268 109 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 IGHV1-58A0A0C4DH39 117 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 A0A1B0GU33 70 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 I3L3M4 83 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 LY6HO94772 140 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 ACYP1P07311 99 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 IGHV3-30-3P0DP02 117 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 Q6ZRU5 148 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 MUSTN1Q8IVN3 82 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 C10orf105Q8TEF2 133 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 LINC00467Q9BRT7 94 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 TIMM21Q9BVV7 248 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 RHPN1-AS1Q9BWJ2 59 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 IMUPQ9GZP8 106 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 TLN1Q9Y490 2541 aaKnown RBP2.88□□□□□ -1.95
SKP1-213ENST00000524288 BSNQ9UPA5 3926 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 CFAP47Q6ZTR5 3102 aa2.88□□□□□ -1.95
SKP1-213ENST00000524288 DMXL2Q8TDJ6 3036 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 DCHS2Q6V1P9 2916 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 KALRNO60229 2985 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 TRAV2A0A0B4J234 112 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 NDUFA1O15239 70 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 ATP5G1P05496 136 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 EMP1P54849 157 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 ZNF56Q15929 161 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 C15orf53Q8NAA6 179 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 HIGD2AQ9BW72 106 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 DOPEY2Q9Y3R5 2298 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 MAP1BP46821 2468 aaKnown RBP2.87□□□□□ -1.95
SKP1-213ENST00000524288 MED13LQ71F56 2210 aa2.87□□□□□ -1.95
SKP1-213ENST00000524288 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 SPTBN1Q01082 2364 aaKnown RBP2.86□□□□□ -1.95
SKP1-213ENST00000524288 TEX49A0A1B0GTD5 131 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 B4DSR2 109 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 CCDC179H3BU77 68 aa2.86□□□□□ -1.95
SKP1-213ENST00000524288 TRACP01848 142 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms