RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CD24P25063 80 aa5.28□□□□□ -1.56
HDAC3-216ENST00000523088 RPL28P46779 137 aaKnown RBP5.28□□□□□ -1.56
HDAC3-216ENST00000523088 FXYD4P59646 89 aa5.28□□□□□ -1.56
HDAC3-216ENST00000523088 Q5VV11 94 aa5.28□□□□□ -1.56
HDAC3-216ENST00000523088 TMEM14BQ9NUH8 114 aa5.28□□□□□ -1.56
HDAC3-216ENST00000523088 IGKV3D-7A0A0C4DH55 119 aa5.27□□□□□ -1.57
HDAC3-216ENST00000523088 LEPROTO15243 131 aa5.27□□□□□ -1.57
HDAC3-216ENST00000523088 Q6ZS46 218 aa5.27□□□□□ -1.57
HDAC3-216ENST00000523088 LEAP2Q969E1 77 aa5.27□□□□□ -1.57
HDAC3-216ENST00000523088 A0A087WVE0 104 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 TRBV6-8A0A0A6YYG3 113 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 IGHV3-16A0A0C4DH30 117 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 ATP6V0E1O15342 81 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 EGFEM1PQ0D2K5 195 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 Q6ZPA2 131 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 Q8N9W7 124 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 KLHL30-AS1Q8NEE0 82 aa5.26□□□□□ -1.57
HDAC3-216ENST00000523088 DNAH3Q8TD57 4116 aa5.25□□□□□ -1.57
HDAC3-216ENST00000523088 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
HDAC3-216ENST00000523088 TRBV6-6A0A0A6YYG2 114 aa5.25□□□□□ -1.57
HDAC3-216ENST00000523088 ZNF833PQ6ZTB9 187 aa5.25□□□□□ -1.57
HDAC3-216ENST00000523088 C4orf3Q8WVX3 66 aa5.25□□□□□ -1.57
HDAC3-216ENST00000523088 SCGB3A1Q96QR1 104 aa5.25□□□□□ -1.57
HDAC3-216ENST00000523088 RNF5Q99942 180 aa5.25□□□□□ -1.57
HDAC3-216ENST00000523088 SORL1Q92673 2214 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 IGHV3-43A0A0B4J1X8 118 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 D6R8Y8 96 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 BAALC-AS2P0C853 105 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 IGHV3-43DP0DP04 118 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 C9orf66Q5T8R8 295 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 LINC00528Q8N1L1 170 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 NPBQ8NG41 125 aa5.24□□□□□ -1.57
HDAC3-216ENST00000523088 IGHV3OR16-12A0A075B7B8 117 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 IGHV3-72A0A0B4J1Y9 119 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 A0A0J9YXY3 114 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 IGIPA6NJ69 53 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 NDUFA3O95167 84 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 TRGV3P03979 118 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 ARMS2P0C7Q2 107 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 P0C879 139 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 SAA2P0DJI9 122 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-216ENST00000523088 FXYD7P58549 80 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 C15orf32Q32M92 178 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 ADAMTSL4-AS1Q5T5F5 129 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 TMEM254Q8TBM7 123 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 LINC00846Q9NV44 126 aa5.23□□□□□ -1.57
HDAC3-216ENST00000523088 H3BUA1 57 aa5.22□□□□□ -1.57
HDAC3-216ENST00000523088 I3L3M4 83 aa5.22□□□□□ -1.57
HDAC3-216ENST00000523088 SOCS3O14543 225 aa5.22□□□□□ -1.57
HDAC3-216ENST00000523088 C10orf99Q6UWK7 81 aa5.22□□□□□ -1.57
HDAC3-216ENST00000523088 B9D2Q9BPU9 175 aa5.22□□□□□ -1.57
HDAC3-216ENST00000523088 TMEM14CQ9P0S9 112 aa5.22□□□□□ -1.57
HDAC3-216ENST00000523088 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
HDAC3-216ENST00000523088 PSCAO43653 123 aa5.21□□□□□ -1.58
HDAC3-216ENST00000523088 PROP1O75360 226 aa5.21□□□□□ -1.58
HDAC3-216ENST00000523088 IGLV1-40P01703 118 aa5.21□□□□□ -1.58
HDAC3-216ENST00000523088 LINC00467Q9BRT7 94 aa5.21□□□□□ -1.58
HDAC3-216ENST00000523088 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
HDAC3-216ENST00000523088 KIF25-AS1Q9Y6Z4 181 aa5.21□□□□□ -1.58
HDAC3-216ENST00000523088 IGHV1OR15-1A0A075B7D0 117 aa5.2□□□□□ -1.58
HDAC3-216ENST00000523088 IGHV7-81A0A0B4J1V7 117 aa5.2□□□□□ -1.58
HDAC3-216ENST00000523088 K7EIL1 84 aa5.2□□□□□ -1.58
HDAC3-216ENST00000523088 K7EQG2 157 aa5.2□□□□□ -1.58
HDAC3-216ENST00000523088 PRB2P02812 416 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-216ENST00000523088 ELOF1P60002 83 aaKnown RBP5.2□□□□□ -1.58
HDAC3-216ENST00000523088 NANOS2P60321 138 aaKnown RBP5.2□□□□□ -1.58
HDAC3-216ENST00000523088 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
HDAC3-216ENST00000523088 FAM218AQ96MZ4 157 aa5.2□□□□□ -1.58
HDAC3-216ENST00000523088 CDC42SE2Q9NRR3 84 aa5.2□□□□□ -1.58
HDAC3-216ENST00000523088 IGLV2-18A0A075B6J9 118 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 IGLV9-49A0A0B4J1Y8 123 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 IGKV1-39P01597 117 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 IGKV1D-39P04432 117 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 FAM104AQ969W3 186 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 UBL5Q9BZL1 73 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 SND1-IT1Q9HBX3 110 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 NACAE9PAV3 2078 aa5.19□□□□□ -1.58
HDAC3-216ENST00000523088 IGKV3D-20A0A0C4DH25 116 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 KRTAP10-11P60412 298 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 MOBPQ13875 183 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 DEFB136Q30KP8 78 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 CASC2Q6XLA1 102 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 WWC2-AS2Q96NR7 200 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 AMELXQ99217 191 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 CCL28Q9NRJ3 127 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 C22orf24Q9Y442 160 aa5.18□□□□□ -1.58
HDAC3-216ENST00000523088 TNCP24821 2201 aa5.17□□□□□ -1.58
HDAC3-216ENST00000523088 G3V318 75 aa5.17□□□□□ -1.58
HDAC3-216ENST00000523088 JMJD7-PLA2G4BH0Y9G9 81 aa5.17□□□□□ -1.58
HDAC3-216ENST00000523088 RPL39P5Q59GN2 51 aa5.17□□□□□ -1.58
HDAC3-216ENST00000523088 USMG5Q96IX5 58 aa5.17□□□□□ -1.58
HDAC3-216ENST00000523088 CELA1Q9UNI1 258 aa5.17□□□□□ -1.58
HDAC3-216ENST00000523088 H7C2G1 150 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 M0R3E3 92 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 IGLV1-51P01701 117 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 IGLV2-11P01706 119 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 IGHV3-48P01763 117 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms