RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 NDUFB1O75438 58 aa3.52□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 ANKRD36CQ5JPF3 1778 aa3.51□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 FREM1Q5H8C1 2179 aa3.51□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 S100A3P33764 101 aa3.51□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 ZNF831Q5JPB2 1677 aa3.51□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 TRGV2A0A075B6R0 118 aa3.5□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 TRGV1A0A0A0MS02 117 aa3.5□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 GDF5OSQ5U4N7 250 aa3.5□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 Q96NJ1 140 aa3.5□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 DNAJC13O75165 2243 aa3.5□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 FN1P02751 2386 aaKnown RBP3.49□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 CAV3P56539 151 aa3.49□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 ABCC6O95255 1503 aa3.49□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 LRRC37A2A6NM11 1700 aa3.48□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 ACYP2P14621 99 aa3.48□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 Q6ZQY7 126 aa3.48□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 Q6ZRN7 208 aaPredicted RBP3.48□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 TMEM263Q8WUH6 116 aaKnown RBP3.48□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 C3P01024 1663 aa3.48□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 PAPPA2Q9BXP8 1791 aa3.48□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 SAMD9Q5K651 1589 aa3.47□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 HCRTO43612 131 aa3.47□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 CPS1P31327 1500 aa3.47□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 NRAPQ86VF7 1730 aa3.47□□□□□ -1.85
RNU6ATAC39P-201ENST00000516309 ABCA5Q8WWZ7 1642 aa3.46□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 ZMYM4Q5VZL5 1548 aa3.45□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 IFI6P09912 130 aa3.45□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 HMGA1P17096 107 aaKnown RBP3.45□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 NCOA6Q14686 2063 aaPredicted RBP3.45□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 LY75O60449 1722 aa3.44□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 C10orf113Q5VZT2 155 aa3.44□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 POLR1AO95602 1720 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 SPINK7P58062 85 aa3.43□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 NREPQ16612 68 aa3.43□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 CCL19Q99731 98 aa3.43□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 SDK1Q7Z5N4 2213 aa3.43□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 ERCC6L2Q5T890 1561 aa3.42□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 ADCY10Q96PN6 1610 aa3.42□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 LINC01549A6NIU2 74 aa3.42□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 LINC00472Q9H8W2 130 aa3.42□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 TRAV21A0A0B4J279 112 aa3.41□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 IQGAP2Q13576 1575 aa3.41□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 TJP1Q07157 1748 aa3.41□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 KIAA0586Q9BVV6 1533 aa3.4□□□□□ -1.86
RNU6ATAC39P-201ENST00000516309 J3QRE1 110 aa3.4□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 INTS1Q8N201 2190 aaKnown RBP3.39□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 WFDC9Q8NEX5 89 aa3.39□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 TRBV30A0A0K0K1B3 111 aa3.38□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 C10orf99Q6UWK7 81 aa3.38□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.38□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 E9PCH4 1651 aa3.38□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 NRXN3Q9Y4C0 1643 aa3.37□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 TRBV6-1A0A0K0K1D8 114 aa3.37□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 OBSCN-AS1Q96MR7 158 aa3.37□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 MED13LQ71F56 2210 aa3.36□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 EFCAB6Q5THR3 1501 aa3.36□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 LCE6AA0A183 80 aa3.36□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 ZFHX3Q15911 3703 aa3.35□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 DEFB112Q30KQ8 113 aa3.35□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 GAFA1Q96PS6 74 aa3.35□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 A0A0G2JMZ2 1700 aa3.34□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 DOT1LQ8TEK3 1739 aa3.34□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 SMIM11BQ8TCY0 68 aa3.34□□□□□ -1.87
RNU6ATAC39P-201ENST00000516309 QSER1Q2KHR3 1735 aa3.33□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 A0A1B0GU69 56 aa3.32□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 ZCCHC13Q8WW36 166 aaKnown RBP3.32□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 DDX60LQ5H9U9 1706 aaKnown RBP3.31□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 NCR3O14931 201 aa3.31□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 CACNA1CQ13936 2221 aa3.31□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 FAM208AQ9UK61 1670 aaKnown RBP3.3□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 UBL5Q9BZL1 73 aa3.3□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 COL4A4P53420 1690 aaPredicted RBP3.3□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 ICE1Q9Y2F5 2266 aa3.3□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 Q6ZRX8 168 aa3.29□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 TOMM5Q8N4H5 51 aa3.29□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 A0A096LNT2 108 aa3.28□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 NCBP2-AS2Q69YL0 99 aa3.28□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 ENHOQ6UWT2 76 aa3.28□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 SLIT1O75093 1534 aa3.28□□□□□ -1.88
RNU6ATAC39P-201ENST00000516309 LRRC37AA6NMS7 1700 aa3.27□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 FCER1GP30273 86 aa3.27□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 LINC00575Q6W349 94 aa3.27□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 ABCC8Q09428 1581 aa3.26□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 GVQW2A0A096LPI5 108 aaPredicted RBP3.26□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 G3V318 75 aa3.26□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 PIN1P1O15428 100 aa3.26□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 PRH1P02810 166 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms