RNA–Protein interactions for RNA: ENST00000509691.1

SEC31A-229, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-229ENST00000509691 FANCD2Q9BXW9 1451 aa0.6□□□□□ -2.31
SEC31A-229ENST00000509691 RGPD4Q7Z3J3 1758 aa0.6□□□□□ -2.31
SEC31A-229ENST00000509691 MYH1P12882 1939 aa0.6□□□□□ -2.31
SEC31A-229ENST00000509691 FREM3P0C091 2139 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 PARP14Q460N5 1801 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 E9PCH4 1651 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 PPRC1Q5VV67 1664 aaKnown RBP0.59□□□□□ -2.31
SEC31A-229ENST00000509691 CTTNBP2Q8WZ74 1663 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 RREB1Q92766 1687 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 PLXNA4Q9HCM2 1894 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 NRXN2Q9P2S2 1712 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 ARHGEF5Q12774 1597 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 GVQW2A0A096LPI5 108 aaPredicted RBP0.59□□□□□ -2.31
SEC31A-229ENST00000509691 A0A1B0GU69 56 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 PIN1P1O15428 100 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 FCER1GP30273 86 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 RPL38P63173 70 aaKnown RBP0.59□□□□□ -2.31
SEC31A-229ENST00000509691 Q6ZRX8 168 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 PLAC4Q8WY50 150 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 UBL5Q9BZL1 73 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 LINC00472Q9H8W2 130 aa0.59□□□□□ -2.31
SEC31A-229ENST00000509691 MYH13Q9UKX3 1938 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 RGPD3A6NKT7 1758 aaPredicted RBP0.59□□□□□ -2.32
SEC31A-229ENST00000509691 LTN1O94822 1766 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 TARBP1Q13395 1621 aaKnown RBP0.59□□□□□ -2.32
SEC31A-229ENST00000509691 CCDC180Q9P1Z9 1646 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 RALGAPBQ86X10 1494 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 CD163L1Q9NR16 1453 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 TANC2Q9HCD6 1990 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 CPS1P31327 1500 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 SYCP2Q9BX26 1530 aa0.59□□□□□ -2.32
SEC31A-229ENST00000509691 ANK1P16157 1881 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 UNC13CQ8NB66 2214 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 DIP2AQ14689 1571 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 CDC42BPGQ6DT37 1551 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 A0A096LNT2 108 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 PRH1P02810 166 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 ENHOQ6UWT2 76 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 SSBP3-AS1Q7Z2R9 100 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 KIF20BQ96Q89 1820 aa0.58□□□□□ -2.32
SEC31A-229ENST00000509691 SAMD9Q5K651 1589 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 CEP170BQ9Y4F5 1589 aaPredicted RBP0.57□□□□□ -2.32
SEC31A-229ENST00000509691 MYH9P35579 1960 aaKnown RBP0.57□□□□□ -2.32
SEC31A-229ENST00000509691 ASCC3Q8N3C0 2202 aaKnown RBP0.57□□□□□ -2.32
SEC31A-229ENST00000509691 PATJQ8NI35 1801 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 PIK3C2BO00750 1634 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 LRP6O75581 1613 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 ABCA9Q8IUA7 1624 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 USP32Q8NFA0 1604 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 RAPGEF6Q8TEU7 1601 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 RNF17Q9BXT8 1623 aaKnown RBP0.57□□□□□ -2.32
SEC31A-229ENST00000509691 PHRF1Q9P1Y6 1649 aaKnown RBP0.57□□□□□ -2.32
SEC31A-229ENST00000509691 LCE6AA0A183 80 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 LINC00959A0A1B0GUT2 108 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 G3V318 75 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 NDUFA4O00483 81 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 COX7BP24311 80 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 SERF2P84101 59 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 SPINK9Q5DT21 86 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 UBE2DNLQ8IWF7 75 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 TOMM5Q8N4H5 51 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 NMES1Q9C002 83 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 PTPRFP10586 1907 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 KNDC1Q76NI1 1749 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 CLASP1Q7Z460 1538 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 LRRC7Q96NW7 1537 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 EML5Q05BV3 1969 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 DLEC1Q9Y238 1755 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 SIP14410 1827 aa0.57□□□□□ -2.32
SEC31A-229ENST00000509691 MYO18AQ92614 2054 aaKnown RBP0.57□□□□□ -2.32
SEC31A-229ENST00000509691 PAPPAQ13219 1627 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 PLXNA2O75051 1894 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 DOCK1Q14185 1865 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 SCN7AQ01118 1682 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 SHPRHQ149N8 1683 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 RGPD1P0DJD0 1748 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 UBR1Q8IWV7 1749 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 CHD3Q12873 2000 aaKnown RBP0.56□□□□□ -2.32
SEC31A-229ENST00000509691 RGPD8O14715 1765 aaPredicted RBP0.56□□□□□ -2.32
SEC31A-229ENST00000509691 RGPD2P0DJD1 1756 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 RGPD5Q99666 1765 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 SPTY2D1-AS1A0A0U1RR47 76 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 MRPL33O75394 65 aaKnown RBP0.56□□□□□ -2.32
SEC31A-229ENST00000509691 LY6G6CO95867 125 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 RPL37P61927 97 aaKnown RBP0.56□□□□□ -2.32
SEC31A-229ENST00000509691 NCBP2-AS2Q69YL0 99 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 CMC2Q9NRP2 79 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 CNTRLQ7Z7A1 2325 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 AFDNP55196 1824 aaKnown RBP0.56□□□□□ -2.32
SEC31A-229ENST00000509691 GLI2P10070 1586 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 MAST1Q9Y2H9 1570 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 TANC1Q9C0D5 1861 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 PLXNA1Q9UIW2 1896 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 LAMC1P11047 1609 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 ABCA6Q8N139 1617 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 ALKQ9UM73 1620 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 MYH8P13535 1937 aa0.56□□□□□ -2.32
SEC31A-229ENST00000509691 ZFC3H1O60293 1989 aaKnown RBP0.56□□□□□ -2.32
SEC31A-229ENST00000509691 LRRC37A2A6NM11 1700 aa0.55□□□□□ -2.32
SEC31A-229ENST00000509691 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms