RNA–Protein interactions for RNA: ENST00000509691.1

SEC31A-229, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-229ENST00000509691 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
SEC31A-229ENST00000509691 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
SEC31A-229ENST00000509691 SENP3Q9H4L4 574 aaPredicted RBP21.08■□□□□ 0.97
SEC31A-229ENST00000509691 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
SEC31A-229ENST00000509691 FOXD1Q16676 465 aa19.62■□□□□ 0.73
SEC31A-229ENST00000509691 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
SEC31A-229ENST00000509691 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
SEC31A-229ENST00000509691 ADRA2BP18089 450 aa18.41■□□□□ 0.54
SEC31A-229ENST00000509691 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
SEC31A-229ENST00000509691 MSH5O43196 834 aa18.32■□□□□ 0.52
SEC31A-229ENST00000509691 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
SEC31A-229ENST00000509691 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
SEC31A-229ENST00000509691 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
SEC31A-229ENST00000509691 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
SEC31A-229ENST00000509691 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
SEC31A-229ENST00000509691 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
SEC31A-229ENST00000509691 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
SEC31A-229ENST00000509691 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
SEC31A-229ENST00000509691 DCAF8L1A6NGE4 600 aa16.08■□□□□ 0.16
SEC31A-229ENST00000509691 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
SEC31A-229ENST00000509691 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
SEC31A-229ENST00000509691 KCNA4P22459 653 aa15.64■□□□□ 0.09
SEC31A-229ENST00000509691 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
SEC31A-229ENST00000509691 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
SEC31A-229ENST00000509691 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
SEC31A-229ENST00000509691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.061e-34■□□□□ 9.2
SEC31A-229ENST00000509691 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
SEC31A-229ENST00000509691 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
SEC31A-229ENST00000509691 SLC4A2P04920 1241 aa15.04■□□□□ -0
SEC31A-229ENST00000509691 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
SEC31A-229ENST00000509691 CAPN15O75808 1086 aa14.84□□□□□ -0.03
SEC31A-229ENST00000509691 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
SEC31A-229ENST00000509691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
SEC31A-229ENST00000509691 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
SEC31A-229ENST00000509691 APLP2Q06481 763 aa14.74□□□□□ -0.05
SEC31A-229ENST00000509691 DSG3P32926 999 aa14.7□□□□□ -0.06
SEC31A-229ENST00000509691 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
SEC31A-229ENST00000509691 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
SEC31A-229ENST00000509691 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
SEC31A-229ENST00000509691 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
SEC31A-229ENST00000509691 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
SEC31A-229ENST00000509691 ABCB7O75027 752 aa14.5□□□□□ -0.09
SEC31A-229ENST00000509691 ZBTB22O15209 634 aa14.36□□□□□ -0.11
SEC31A-229ENST00000509691 POLA2Q14181 598 aa14.27□□□□□ -0.13
SEC31A-229ENST00000509691 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
SEC31A-229ENST00000509691 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
SEC31A-229ENST00000509691 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
SEC31A-229ENST00000509691 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
SEC31A-229ENST00000509691 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
SEC31A-229ENST00000509691 POTEHQ6S545 545 aa13.84□□□□□ -0.19
SEC31A-229ENST00000509691 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
SEC31A-229ENST00000509691 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.21
SEC31A-229ENST00000509691 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
SEC31A-229ENST00000509691 FBLN2P98095 1184 aa13.73□□□□□ -0.21
SEC31A-229ENST00000509691 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
SEC31A-229ENST00000509691 MKRN4PQ13434 485 aaPredicted RBP13.61□□□□□ -0.23
SEC31A-229ENST00000509691 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
SEC31A-229ENST00000509691 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
SEC31A-229ENST00000509691 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
SEC31A-229ENST00000509691 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
SEC31A-229ENST00000509691 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
SEC31A-229ENST00000509691 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
SEC31A-229ENST00000509691 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
SEC31A-229ENST00000509691 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
SEC31A-229ENST00000509691 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
SEC31A-229ENST00000509691 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEC31A-229ENST00000509691 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
SEC31A-229ENST00000509691 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC31A-229ENST00000509691 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
SEC31A-229ENST00000509691 HAX1O00165 279 aa13.1□□□□□ -0.31
SEC31A-229ENST00000509691 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
SEC31A-229ENST00000509691 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
SEC31A-229ENST00000509691 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
SEC31A-229ENST00000509691 CHADLQ6NUI6 762 aa13□□□□□ -0.33
SEC31A-229ENST00000509691 EVX2Q03828 476 aa12.92□□□□□ -0.34
SEC31A-229ENST00000509691 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
SEC31A-229ENST00000509691 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
SEC31A-229ENST00000509691 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
SEC31A-229ENST00000509691 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
SEC31A-229ENST00000509691 PROM2Q8N271 834 aa12.73□□□□□ -0.37
SEC31A-229ENST00000509691 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
SEC31A-229ENST00000509691 GABBR2O75899 941 aa12.65□□□□□ -0.38
SEC31A-229ENST00000509691 FKBP8Q14318 412 aa12.58□□□□□ -0.4
SEC31A-229ENST00000509691 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEC31A-229ENST00000509691 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
SEC31A-229ENST00000509691 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
SEC31A-229ENST00000509691 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
SEC31A-229ENST00000509691 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
SEC31A-229ENST00000509691 CLCN6P51797 869 aa12.51□□□□□ -0.41
SEC31A-229ENST00000509691 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
SEC31A-229ENST00000509691 MIER1Q8N108 512 aa12.46□□□□□ -0.41
SEC31A-229ENST00000509691 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
SEC31A-229ENST00000509691 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
SEC31A-229ENST00000509691 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
SEC31A-229ENST00000509691 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
SEC31A-229ENST00000509691 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
SEC31A-229ENST00000509691 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
SEC31A-229ENST00000509691 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
SEC31A-229ENST00000509691 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
SEC31A-229ENST00000509691 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms