RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 REG3AQ06141 175 aa17.76■□□□□ 0.43
HOXB3-212ENST00000498678 SNCGO76070 127 aa17.75■□□□□ 0.43
HOXB3-212ENST00000498678 A0A0J9YXY3 114 aa17.74■□□□□ 0.43
HOXB3-212ENST00000498678 A0A087WZ39 114 aa17.74■□□□□ 0.43
HOXB3-212ENST00000498678 XCL1P47992 114 aa17.74■□□□□ 0.43
HOXB3-212ENST00000498678 WFDC10BQ8IUB3 73 aa17.74■□□□□ 0.43
HOXB3-212ENST00000498678 DNHD1Q96M86 4753 aa17.73■□□□□ 0.43
HOXB3-212ENST00000498678 SRSF9Q13242 221 aaKnown RBP eCLIP17.73■□□□□ 0.43
HOXB3-212ENST00000498678 KRTAP21-3Q3LHN1 58 aa17.73■□□□□ 0.43
HOXB3-212ENST00000498678 C5orf38Q86SI9 138 aa17.73■□□□□ 0.43
HOXB3-212ENST00000498678 PPDPFQ9H3Y8 114 aa17.73■□□□□ 0.43
HOXB3-212ENST00000498678 C15orf53Q8NAA6 179 aa17.72■□□□□ 0.43
HOXB3-212ENST00000498678 DNAH9Q9NYC9 4486 aa17.71■□□□□ 0.43
HOXB3-212ENST00000498678 NDUFA1O15239 70 aa17.71■□□□□ 0.43
HOXB3-212ENST00000498678 KLK12Q9UKR0 248 aa17.71■□□□□ 0.43
HOXB3-212ENST00000498678 IGHV3-30P01768 117 aa17.7■□□□□ 0.42
HOXB3-212ENST00000498678 IGHV3-33P01772 117 aa17.7■□□□□ 0.42
HOXB3-212ENST00000498678 IGHV3-30-5P0DP03 117 aa17.7■□□□□ 0.42
HOXB3-212ENST00000498678 PRR34Q9NV39 138 aa17.7■□□□□ 0.42
HOXB3-212ENST00000498678 MEIG1Q5JSS6 88 aa17.7■□□□□ 0.42
HOXB3-212ENST00000498678 TRBV20-1A0A075B6N2 111 aa17.69■□□□□ 0.42
HOXB3-212ENST00000498678 CHCHD10Q8WYQ3 142 aaPredicted RBP17.69■□□□□ 0.42
HOXB3-212ENST00000498678 COL7A1Q02388 2944 aa17.67■□□□□ 0.42
HOXB3-212ENST00000498678 IGLV10-54A0A075B6I4 117 aa17.67■□□□□ 0.42
HOXB3-212ENST00000498678 CD164L2Q6UWJ8 174 aa17.67■□□□□ 0.42
HOXB3-212ENST00000498678 Q9H8V8 135 aa17.67■□□□□ 0.42
HOXB3-212ENST00000498678 LITAFQ99732 161 aa17.67■□□□□ 0.42
HOXB3-212ENST00000498678 ENHOQ6UWT2 76 aa17.66■□□□□ 0.42
HOXB3-212ENST00000498678 ZNF625Q96I27 306 aaPredicted RBP17.66■□□□□ 0.42
HOXB3-212ENST00000498678 COX7B2Q8TF08 81 aa17.66■□□□□ 0.42
HOXB3-212ENST00000498678 SPANXCQ9NY87 97 aa17.64■□□□□ 0.42
HOXB3-212ENST00000498678 PSMB2P49721 201 aa17.64■□□□□ 0.41
HOXB3-212ENST00000498678 LINC01561Q8N1V8 128 aa17.63■□□□□ 0.41
HOXB3-212ENST00000498678 TOMM7Q9P0U1 55 aa17.63■□□□□ 0.41
HOXB3-212ENST00000498678 ADAMTSL4-AS1Q5T5F5 129 aa17.62■□□□□ 0.41
HOXB3-212ENST00000498678 STAB2Q8WWQ8 2551 aa17.6■□□□□ 0.41
HOXB3-212ENST00000498678 TIMM17BO60830 172 aa17.6■□□□□ 0.41
HOXB3-212ENST00000498678 SCGB1C2P0DMR2 95 aa17.6■□□□□ 0.41
HOXB3-212ENST00000498678 UBE2WQ96B02 151 aa17.6■□□□□ 0.41
HOXB3-212ENST00000498678 SPANXDQ9BXN6 97 aa17.6■□□□□ 0.41
HOXB3-212ENST00000498678 COX7A2LO14548 114 aa17.6■□□□□ 0.41
HOXB3-212ENST00000498678 LINC01556Q5JQF7 62 aa17.6■□□□□ 0.41
HOXB3-212ENST00000498678 LINC00588Q9Y4M8 146 aa17.59■□□□□ 0.41
HOXB3-212ENST00000498678 CRPP02741 224 aa17.59■□□□□ 0.41
HOXB3-212ENST00000498678 MUSTN1Q8IVN3 82 aa17.57■□□□□ 0.4
HOXB3-212ENST00000498678 ANKRD29Q8N6D5 301 aa17.57■□□□□ 0.4
HOXB3-212ENST00000498678 TRAV8-4A0A0B4J246 113 aa17.56■□□□□ 0.4
HOXB3-212ENST00000498678 CCL18P55774 89 aa17.55■□□□□ 0.4
HOXB3-212ENST00000498678 CIRBPQ14011 172 aaKnown RBP17.55■□□□□ 0.4
HOXB3-212ENST00000498678 MIAQ16674 131 aa17.55■□□□□ 0.4
HOXB3-212ENST00000498678 DNAH10OSP0CZ25 163 aa17.55■□□□□ 0.4
HOXB3-212ENST00000498678 LINC01600Q96MT4 127 aa17.55■□□□□ 0.4
HOXB3-212ENST00000498678 PRSS2P07478 247 aa17.54■□□□□ 0.4
HOXB3-212ENST00000498678 C6orf226Q5I0X4 101 aa17.54■□□□□ 0.4
HOXB3-212ENST00000498678 Q8IZM0 81 aa17.54■□□□□ 0.4
HOXB3-212ENST00000498678 LOC107984156A0A0G2JMH3 177 aa17.53■□□□□ 0.4
HOXB3-212ENST00000498678 MALP21145 153 aa17.53■□□□□ 0.4
HOXB3-212ENST00000498678 ARL17AQ8IVW1 177 aa17.53■□□□□ 0.4
HOXB3-212ENST00000498678 A0A1B0GX51 115 aa17.52■□□□□ 0.4
HOXB3-212ENST00000498678 DAND5Q8N907 189 aa17.52■□□□□ 0.39
HOXB3-212ENST00000498678 A0A0U1RRA0 63 aa17.5■□□□□ 0.39
HOXB3-212ENST00000498678 A4D1N5 150 aa17.5■□□□□ 0.39
HOXB3-212ENST00000498678 KIAA0087Q14695 138 aa17.5■□□□□ 0.39
HOXB3-212ENST00000498678 RPS28P62857 69 aaKnown RBP17.49■□□□□ 0.39
HOXB3-212ENST00000498678 TCL1BO95988 128 aa17.49■□□□□ 0.39
HOXB3-212ENST00000498678 CFC1BP0CG36 223 aa17.49■□□□□ 0.39
HOXB3-212ENST00000498678 CFC1P0CG37 223 aa17.49■□□□□ 0.39
HOXB3-212ENST00000498678 KRTAP26-1Q6PEX3 210 aa17.49■□□□□ 0.39
HOXB3-212ENST00000498678 MEGF8Q7Z7M0 2845 aa17.49■□□□□ 0.39
HOXB3-212ENST00000498678 NPC2P61916 151 aa17.48■□□□□ 0.39
HOXB3-212ENST00000498678 SFTA2Q6UW10 78 aa17.48■□□□□ 0.39
HOXB3-212ENST00000498678 J3KT08 172 aa17.47■□□□□ 0.39
HOXB3-212ENST00000498678 KLK5Q9Y337 293 aaPredicted RBP17.47■□□□□ 0.39
HOXB3-212ENST00000498678 PRKDCP78527 4128 aaKnown RBP17.47■□□□□ 0.39
HOXB3-212ENST00000498678 EIF4EBP3O60516 100 aaPredicted RBP17.47■□□□□ 0.39
HOXB3-212ENST00000498678 UPK3BQ9BT76 320 aa17.47■□□□□ 0.39
HOXB3-212ENST00000498678 C2orf82Q6UX34 121 aa17.46■□□□□ 0.39
HOXB3-212ENST00000498678 OR13C6PQ8NH95 151 aa17.46■□□□□ 0.39
HOXB3-212ENST00000498678 APLNQ9ULZ1 77 aa17.46■□□□□ 0.39
HOXB3-212ENST00000498678 SLC25A20O43772 301 aa17.45■□□□□ 0.38
HOXB3-212ENST00000498678 RPL13AP40429 203 aaKnown RBP17.44■□□□□ 0.38
HOXB3-212ENST00000498678 LINC00308Q8TCZ7 52 aa17.44■□□□□ 0.38
HOXB3-212ENST00000498678 IBA57-AS1B1ANH7 110 aa17.43■□□□□ 0.38
HOXB3-212ENST00000498678 CXCL5P42830 114 aa17.42■□□□□ 0.38
HOXB3-212ENST00000498678 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.41■□□□□ 0.38
HOXB3-212ENST00000498678 C1orf43Q9BWL3 253 aa17.41■□□□□ 0.38
HOXB3-212ENST00000498678 SPAG11BQ08648 103 aa17.4■□□□□ 0.38
HOXB3-212ENST00000498678 SOSTDC1Q6X4U4 206 aa17.4■□□□□ 0.38
HOXB3-212ENST00000498678 C9JAW5 83 aa17.4■□□□□ 0.38
HOXB3-212ENST00000498678 A0A0B4J2C4 111 aa17.39■□□□□ 0.37
HOXB3-212ENST00000498678 TRBV7-7A0A0K0K1E9 115 aa17.39■□□□□ 0.37
HOXB3-212ENST00000498678 LINC00158P58513 81 aa17.39■□□□□ 0.37
HOXB3-212ENST00000498678 MIR7-3HGQ8N6C7 128 aa17.39■□□□□ 0.37
HOXB3-212ENST00000498678 IGKV2D-24A0A075B6R9 120 aa17.38■□□□□ 0.37
HOXB3-212ENST00000498678 FAM19A5Q7Z5A7 132 aaPredicted RBP17.38■□□□□ 0.37
HOXB3-212ENST00000498678 IMUPQ9GZP8 106 aa17.38■□□□□ 0.37
HOXB3-212ENST00000498678 PRO1854Q9UHT4 67 aa17.38■□□□□ 0.37
HOXB3-212ENST00000498678 PFN2P35080 140 aa17.38■□□□□ 0.37
HOXB3-212ENST00000498678 C6orf223Q8N319 242 aa17.38■□□□□ 0.37
HOXB3-212ENST00000498678 NUPR2A6NF83 97 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms