RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
CHD2-202ENST00000420239 MAP6D1Q9H9H5 199 aa4.22□□□□□ -1.73
CHD2-202ENST00000420239 V9GYY9 64 aa4.22□□□□□ -1.73
CHD2-202ENST00000420239 SVEP1Q4LDE5 3571 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 Q6ZVQ6 151 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 TM2D3Q9BRN9 247 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 RELNP78509 3460 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 A0A087WZ39 114 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 TMEM256-PLSCR3K7ERE1 68 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 PRR3P79522 188 aaKnown RBP4.21□□□□□ -1.74
CHD2-202ENST00000420239 SPATA3Q8NHX4 192 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 C11orf68Q9H3H3 251 aaKnown RBP4.21□□□□□ -1.74
CHD2-202ENST00000420239 MUC3AQ02505 3323 aa4.21□□□□□ -1.74
CHD2-202ENST00000420239 COL6A6A6NMZ7 2263 aa4.2□□□□□ -1.74
CHD2-202ENST00000420239 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
CHD2-202ENST00000420239 MSMBP08118 114 aa4.2□□□□□ -1.74
CHD2-202ENST00000420239 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
CHD2-202ENST00000420239 C1orf158Q8N1D5 194 aa4.2□□□□□ -1.74
CHD2-202ENST00000420239 ANKRD11Q6UB99 2663 aaPredicted RBP4.2□□□□□ -1.74
CHD2-202ENST00000420239 LOC110117498A0A087WWA1 95 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 HAMPP81172 84 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 SORL1Q92673 2214 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 EP300Q09472 2414 aaPredicted RBP4.19□□□□□ -1.74
CHD2-202ENST00000420239 IGLV4-60A0A075B6I1 120 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 UBE2L6O14933 153 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 IGHV4-59P01825 116 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 MIFP14174 115 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 C6orf223Q8N319 242 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 ZNF843Q8N446 348 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 MPLKIPQ8TAP9 179 aa4.19□□□□□ -1.74
CHD2-202ENST00000420239 TRGV1A0A0A0MS02 117 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 LOC100131303A0A0U1RQF7 123 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 C19orf84I3L1E1 186 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 NDUFC1O43677 76 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 DEFB112Q30KQ8 113 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 ZNF702PQ9H963 129 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 ZFHX3Q15911 3703 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 NREPQ16612 68 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 DEFB114Q30KQ6 69 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 SCXQ7RTU7 201 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 Q8NDZ9 215 aa4.18□□□□□ -1.74
CHD2-202ENST00000420239 LAMA5O15230 3695 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 PTPRZ1P23471 2315 aaPredicted RBP4.17□□□□□ -1.74
CHD2-202ENST00000420239 B4DSR2 109 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 CXCL6P80162 114 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 LINC00575Q6W349 94 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 IGHV4-30-2A0A087WSY4 118 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 C6orf99Q4VX62 202 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 Q8IZM0 81 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
CHD2-202ENST00000420239 ASH1LQ9NR48 2969 aaKnown RBP4.17□□□□□ -1.74
CHD2-202ENST00000420239 ATMQ13315 3056 aa4.16□□□□□ -1.74
CHD2-202ENST00000420239 PTPRQQ9UMZ3 2332 aa4.16□□□□□ -1.74
CHD2-202ENST00000420239 H3BQ85 93 aa4.16□□□□□ -1.74
CHD2-202ENST00000420239 TTC28Q96AY4 2481 aa4.16□□□□□ -1.74
CHD2-202ENST00000420239 AKAP13Q12802 2813 aa4.16□□□□□ -1.74
CHD2-202ENST00000420239 TRBV6-8A0A0A6YYG3 113 aa4.15□□□□□ -1.74
CHD2-202ENST00000420239 PDE6GP18545 87 aa4.15□□□□□ -1.74
CHD2-202ENST00000420239 COX17Q14061 63 aa4.15□□□□□ -1.74
CHD2-202ENST00000420239 ODF3L2Q3SX64 289 aa4.15□□□□□ -1.74
CHD2-202ENST00000420239 C9orf66Q5T8R8 295 aa4.15□□□□□ -1.74
CHD2-202ENST00000420239 C18orf65Q6ZTR6 163 aa4.15□□□□□ -1.74
CHD2-202ENST00000420239 BDP1A6H8Y1 2624 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 LINC00959A0A1B0GUT2 108 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 PLAC8L1A1L4L8 177 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 FSHBP01225 129 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 ESRGQ1W209 222 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 C6orf226Q5I0X4 101 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 C4orf3Q8WVX3 66 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 LAMTOR3Q9UHA4 124 aa4.15□□□□□ -1.75
CHD2-202ENST00000420239 TLN1Q9Y490 2541 aaKnown RBP4.14□□□□□ -1.75
CHD2-202ENST00000420239 DEFB136Q30KP8 78 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 Q6ZTC4 211 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 MUC7Q8TAX7 377 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 DYNLRB2Q8TF09 96 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 SPTAN1Q13813 2472 aaKnown RBP4.14□□□□□ -1.75
CHD2-202ENST00000420239 IGHV4-28A0A0C4DH34 117 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 BPY2O14599 106 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 ERC2-IT1O76042 136 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 STHQ8IWL8 128 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 C16orf74Q96GX8 76 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 CCL19Q99731 98 aa4.14□□□□□ -1.75
CHD2-202ENST00000420239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.13□□□□□ -1.751e-7■■■■■ 28.4
CHD2-202ENST00000420239 A0A1B0GUV1 79 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 PRB1P04280 392 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 VPREB1P12018 145 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 FUSP35637 526 aaKnown RBP eCLIP4.13□□□□□ -1.75
CHD2-202ENST00000420239 DSCR9P59020 149 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 KIAA0087Q14695 138 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 CELSR1Q9NYQ6 3014 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 GIG44P09565 113 aaPredicted RBP4.13□□□□□ -1.75
CHD2-202ENST00000420239 PRR15Q8IV56 129 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 Q8N9L7 120 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 OCR1Q9BZK8 76 aa4.13□□□□□ -1.75
CHD2-202ENST00000420239 NOP10Q9NPE3 64 aaKnown RBP4.13□□□□□ -1.75
CHD2-202ENST00000420239 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
CHD2-202ENST00000420239 PLA2G2AP14555 144 aa4.12□□□□□ -1.75
CHD2-202ENST00000420239 GNLYP22749 145 aa4.12□□□□□ -1.75
CHD2-202ENST00000420239 CMC4P56277 68 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms