RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
PDGFC-201ENST00000274071 A0A096LNT2 108 aa6.44□□□□□ -1.38
PDGFC-201ENST00000274071 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
PDGFC-201ENST00000274071 LINC01356Q8N9X3 169 aa6.44□□□□□ -1.38
PDGFC-201ENST00000274071 IGSF10Q6WRI0 2623 aa6.44□□□□□ -1.38
PDGFC-201ENST00000274071 IGKV3-20P01619 116 aa6.44□□□□□ -1.38
PDGFC-201ENST00000274071 SCXQ7RTU7 201 aa6.44□□□□□ -1.38
PDGFC-201ENST00000274071 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
PDGFC-201ENST00000274071 USP24Q9UPU5 2620 aa6.43□□□□□ -1.38
PDGFC-201ENST00000274071 M0R378 163 aa6.43□□□□□ -1.38
PDGFC-201ENST00000274071 LY6G6DO95868 133 aa6.43□□□□□ -1.38
PDGFC-201ENST00000274071 HIGD2AQ9BW72 106 aa6.43□□□□□ -1.38
PDGFC-201ENST00000274071 FLNCQ14315 2725 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 C19orf84I3L1E1 186 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 DOPEY2Q9Y3R5 2298 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 LOC110117498A0A087WWA1 95 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 TRBV6-4A0A1B0GX49 114 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 APOC4P55056 127 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
PDGFC-201ENST00000274071 MAP1AP78559 2803 aaPredicted RBP6.42□□□□□ -1.38
PDGFC-201ENST00000274071 NTM-AS1Q6ZSK4 140 aa6.41□□□□□ -1.38
PDGFC-201ENST00000274071 MYO18BQ8IUG5 2567 aa6.41□□□□□ -1.38
PDGFC-201ENST00000274071 ZFP36P26651 326 aaKnown RBP6.41□□□□□ -1.38
PDGFC-201ENST00000274071 CD164L2Q6UWJ8 174 aa6.41□□□□□ -1.38
PDGFC-201ENST00000274071 RHPN1-AS1Q9BWJ2 59 aa6.41□□□□□ -1.38
PDGFC-201ENST00000274071 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
PDGFC-201ENST00000274071 SPINK13Q1W4C9 94 aa6.4□□□□□ -1.38
PDGFC-201ENST00000274071 TOMM7Q9P0U1 55 aa6.4□□□□□ -1.38
PDGFC-201ENST00000274071 CRYBG3Q68DQ2 2970 aa6.4□□□□□ -1.38
PDGFC-201ENST00000274071 NANOS2P60321 138 aaKnown RBP6.4□□□□□ -1.39
PDGFC-201ENST00000274071 COX7B2Q8TF08 81 aa6.4□□□□□ -1.39
PDGFC-201ENST00000274071 A8MUN3 132 aa6.39□□□□□ -1.39
PDGFC-201ENST00000274071 NDUFA4O00483 81 aa6.39□□□□□ -1.39
PDGFC-201ENST00000274071 HTN1P15515 57 aa6.39□□□□□ -1.39
PDGFC-201ENST00000274071 CELSR1Q9NYQ6 3014 aa6.39□□□□□ -1.39
PDGFC-201ENST00000274071 UTP20O75691 2785 aaKnown RBP6.39□□□□□ -1.39
PDGFC-201ENST00000274071 ZNF462Q96JM2 2506 aa6.38□□□□□ -1.39
PDGFC-201ENST00000274071 K7EQD1 137 aa6.38□□□□□ -1.39
PDGFC-201ENST00000274071 PRM2P04554 102 aa6.38□□□□□ -1.39
PDGFC-201ENST00000274071 CELSR2Q9HCU4 2923 aa6.38□□□□□ -1.39
PDGFC-201ENST00000274071 USP9XQ93008 2570 aaPredicted RBP6.37□□□□□ -1.39
PDGFC-201ENST00000274071 PRR3P79522 188 aaKnown RBP6.37□□□□□ -1.39
PDGFC-201ENST00000274071 CDC42SE2Q9NRR3 84 aa6.37□□□□□ -1.39
PDGFC-201ENST00000274071 UBE2BP63146 152 aa6.37□□□□□ -1.39
PDGFC-201ENST00000274071 SPG11Q96JI7 2443 aa6.37□□□□□ -1.39
PDGFC-201ENST00000274071 CENPEQ02224 2701 aa6.36□□□□□ -1.39
PDGFC-201ENST00000274071 LMO4P61968 165 aa6.36□□□□□ -1.39
PDGFC-201ENST00000274071 Q8N9L7 120 aa6.36□□□□□ -1.39
PDGFC-201ENST00000274071 C16orf90A8MZG2 172 aa6.36□□□□□ -1.39
PDGFC-201ENST00000274071 DOPEY1Q5JWR5 2465 aa6.36□□□□□ -1.39
PDGFC-201ENST00000274071 FAM208BQ5VWN6 2430 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 LYRM9A8MSI8 78 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 IGHV3-53P01767 116 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 C9orf66Q5T8R8 295 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 Q5VV11 94 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 MINOS1-NBL1R4GNA1 71 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 CSMD2Q7Z408 3487 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 LRRK2Q5S007 2527 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 H3BS24 57 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 LINC00269Q8N2A0 174 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
PDGFC-201ENST00000274071 IGHV3-11P01762 117 aa6.34□□□□□ -1.39
PDGFC-201ENST00000274071 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
PDGFC-201ENST00000274071 SPATA3Q8NHX4 192 aa6.34□□□□□ -1.39
PDGFC-201ENST00000274071 PSCAO43653 123 aa6.34□□□□□ -1.39
PDGFC-201ENST00000274071 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
PDGFC-201ENST00000274071 C11orf44Q8N8P7 122 aa6.34□□□□□ -1.39
PDGFC-201ENST00000274071 LINC01006Q8NI28 216 aa6.34□□□□□ -1.39
PDGFC-201ENST00000274071 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 K7EMT4 169 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 NDUFS5O43920 106 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 PDE6GP18545 87 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 MUC7Q8TAX7 377 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 C6orf99Q4VX62 202 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 LINC00575Q6W349 94 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 CCL19Q99731 98 aa6.33□□□□□ -1.4
PDGFC-201ENST00000274071 ZNF73O43830 326 aaPredicted RBP6.33□□□□□ -1.4
PDGFC-201ENST00000274071 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
PDGFC-201ENST00000274071 ABCA2Q9BZC7 2435 aa6.32□□□□□ -1.4
PDGFC-201ENST00000274071 CHD6Q8TD26 2715 aa6.31□□□□□ -1.4
PDGFC-201ENST00000274071 A6NN06 94 aa6.31□□□□□ -1.4
PDGFC-201ENST00000274071 IGHV4-61A0A0C4DH41 118 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 A8MTW9 85 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 TRBV6-8A0A0A6YYG3 113 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 C5orf56Q8N8D9 126 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 UBE2AP49459 152 aa6.3□□□□□ -1.4
PDGFC-201ENST00000274071 C2CD3Q4AC94 2353 aa6.29□□□□□ -1.4
PDGFC-201ENST00000274071 IGKV3OR2-268A0A0C4DH90 116 aa6.29□□□□□ -1.4
PDGFC-201ENST00000274071 LCA10Q71F78 164 aa6.29□□□□□ -1.4
PDGFC-201ENST00000274071 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
PDGFC-201ENST00000274071 POLQO75417 2590 aa6.29□□□□□ -1.4
PDGFC-201ENST00000274071 IGHV3OR16-9A0A0B4J2B5 98 aa6.29□□□□□ -1.4
PDGFC-201ENST00000274071 PRR4Q16378 134 aa6.29□□□□□ -1.4
PDGFC-201ENST00000274071 UBE2L6O14933 153 aa6.28□□□□□ -1.4
PDGFC-201ENST00000274071 PRB2P02812 416 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms