RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 TMEM256-PLSCR3K7ERE1 68 aa14.42□□□□□ -0.1
RARA-201ENST00000254066 TRAV23DV6A0A075B6W5 121 aa14.42□□□□□ -0.1
RARA-201ENST00000254066 INSP01308 110 aa14.42□□□□□ -0.1
RARA-201ENST00000254066 C20orf197Q8N268 126 aa14.42□□□□□ -0.1
RARA-201ENST00000254066 UBL5Q9BZL1 73 aa14.42□□□□□ -0.1
RARA-201ENST00000254066 TRAV7A0A075B6U4 112 aa14.41□□□□□ -0.1
RARA-201ENST00000254066 LINC00482Q8N8I6 264 aa14.41□□□□□ -0.1
RARA-201ENST00000254066 UBE2L6O14933 153 aa14.4□□□□□ -0.1
RARA-201ENST00000254066 SLPIP03973 132 aa14.4□□□□□ -0.1
RARA-201ENST00000254066 C1orf158Q8N1D5 194 aa14.4□□□□□ -0.1
RARA-201ENST00000254066 H7BZZ5 65 aa14.39□□□□□ -0.11
RARA-201ENST00000254066 ENHOQ6UWT2 76 aa14.39□□□□□ -0.11
RARA-201ENST00000254066 PAX4O43316 350 aa14.38□□□□□ -0.11
RARA-201ENST00000254066 ANKRD17O75179 2603 aaKnown RBP14.38□□□□□ -0.11
RARA-201ENST00000254066 KLKP1Q107X0 134 aa14.37□□□□□ -0.11
RARA-201ENST00000254066 OTOGQ6ZRI0 2925 aa14.37□□□□□ -0.11
RARA-201ENST00000254066 TOMM7Q9P0U1 55 aa14.36□□□□□ -0.11
RARA-201ENST00000254066 Q8N814 137 aa14.35□□□□□ -0.11
RARA-201ENST00000254066 FP248Q71RG6 208 aaPredicted RBP14.35□□□□□ -0.11
RARA-201ENST00000254066 UBE2E2Q96LR5 201 aa14.35□□□□□ -0.11
RARA-201ENST00000254066 C4orf48Q5BLP8 95 aa14.34□□□□□ -0.11
RARA-201ENST00000254066 HRNRQ86YZ3 2850 aaPredicted RBP14.34□□□□□ -0.11
RARA-201ENST00000254066 C10orf99Q6UWK7 81 aa14.34□□□□□ -0.11
RARA-201ENST00000254066 IGHV3OR16-9A0A0B4J2B5 98 aa14.33□□□□□ -0.12
RARA-201ENST00000254066 A0A087WZ39 114 aa14.33□□□□□ -0.12
RARA-201ENST00000254066 IGHV4-61A0A0C4DH41 118 aa14.33□□□□□ -0.12
RARA-201ENST00000254066 WFDC9Q8NEX5 89 aa14.33□□□□□ -0.12
RARA-201ENST00000254066 POLQO75417 2590 aa14.32□□□□□ -0.12
RARA-201ENST00000254066 CCDC168Q8NDH2 2452 aa14.31□□□□□ -0.12
RARA-201ENST00000254066 TRGV1A0A0A0MS02 117 aa14.31□□□□□ -0.12
RARA-201ENST00000254066 MAP6D1Q9H9H5 199 aa14.31□□□□□ -0.12
RARA-201ENST00000254066 DEFB113Q30KQ7 82 aa14.3□□□□□ -0.12
RARA-201ENST00000254066 CSMD2Q7Z408 3487 aa14.3□□□□□ -0.12
RARA-201ENST00000254066 NDUFC1O43677 76 aa14.29□□□□□ -0.12
RARA-201ENST00000254066 C11orf44Q8N8P7 122 aa14.28□□□□□ -0.12
RARA-201ENST00000254066 F8P00451 2351 aa14.28□□□□□ -0.12
RARA-201ENST00000254066 SPG11Q96JI7 2443 aa14.28□□□□□ -0.12
RARA-201ENST00000254066 AKAP9Q99996 3911 aa14.28□□□□□ -0.12
RARA-201ENST00000254066 ATP5EP56381 51 aaPredicted RBP14.27□□□□□ -0.12
RARA-201ENST00000254066 MSMBP08118 114 aa14.27□□□□□ -0.13
RARA-201ENST00000254066 LOC110117498A0A087WWA1 95 aa14.26□□□□□ -0.13
RARA-201ENST00000254066 STHQ8IWL8 128 aa14.25□□□□□ -0.13
RARA-201ENST00000254066 LAMTOR3Q9UHA4 124 aa14.25□□□□□ -0.13
RARA-201ENST00000254066 ABCA2Q9BZC7 2435 aa14.24□□□□□ -0.13
RARA-201ENST00000254066 NANOS2P60321 138 aaKnown RBP14.24□□□□□ -0.13
RARA-201ENST00000254066 Q6ZQT0 140 aa14.24□□□□□ -0.13
RARA-201ENST00000254066 IGHV4-59P01825 116 aa14.23□□□□□ -0.13
RARA-201ENST00000254066 Q6ZRU5 148 aa14.23□□□□□ -0.13
RARA-201ENST00000254066 A0A096LNT2 108 aa14.23□□□□□ -0.13
RARA-201ENST00000254066 PRR15Q8IV56 129 aa14.22□□□□□ -0.13
RARA-201ENST00000254066 HIVEP1P15822 2718 aa14.22□□□□□ -0.13
RARA-201ENST00000254066 CXCL6P80162 114 aa14.22□□□□□ -0.13
RARA-201ENST00000254066 Q6ZTI0 123 aa14.22□□□□□ -0.13
RARA-201ENST00000254066 RBM3P98179 157 aaKnown RBP14.21□□□□□ -0.13
RARA-201ENST00000254066 SLURP1P55000 103 aa14.21□□□□□ -0.14
RARA-201ENST00000254066 LINC01547P58512 204 aaPredicted RBP14.21□□□□□ -0.14
RARA-201ENST00000254066 CCL19Q99731 98 aa14.21□□□□□ -0.14
RARA-201ENST00000254066 PDE6GP18545 87 aa14.2□□□□□ -0.14
RARA-201ENST00000254066 Q8IZM0 81 aa14.2□□□□□ -0.14
RARA-201ENST00000254066 H3BQ85 93 aa14.19□□□□□ -0.14
RARA-201ENST00000254066 C6orf223Q8N319 242 aa14.19□□□□□ -0.14
RARA-201ENST00000254066 SORL1Q92673 2214 aa14.19□□□□□ -0.14
RARA-201ENST00000254066 DEFB112Q30KQ8 113 aa14.19□□□□□ -0.14
RARA-201ENST00000254066 AKAP6Q13023 2319 aa14.18□□□□□ -0.14
RARA-201ENST00000254066 IGLV4-60A0A075B6I1 120 aa14.18□□□□□ -0.14
RARA-201ENST00000254066 DYNLRB2Q8TF09 96 aa14.17□□□□□ -0.14
RARA-201ENST00000254066 TEP1Q99973 2627 aaKnown RBP14.17□□□□□ -0.14
RARA-201ENST00000254066 B4DSR2 109 aa14.17□□□□□ -0.14
RARA-201ENST00000254066 TRBV6-8A0A0A6YYG3 113 aa14.16□□□□□ -0.14
RARA-201ENST00000254066 F8WEM9 126 aa14.16□□□□□ -0.14
RARA-201ENST00000254066 COX17Q14061 63 aa14.16□□□□□ -0.14
RARA-201ENST00000254066 CELSR1Q9NYQ6 3014 aa14.16□□□□□ -0.14
RARA-201ENST00000254066 IGKV3OR2-268A0A0C4DH90 116 aa14.16□□□□□ -0.14
RARA-201ENST00000254066 DEFB114Q30KQ6 69 aa14.16□□□□□ -0.14
RARA-201ENST00000254066 LINC00959A0A1B0GUT2 108 aa14.15□□□□□ -0.14
RARA-201ENST00000254066 LINC00575Q6W349 94 aa14.15□□□□□ -0.14
RARA-201ENST00000254066 Q6ZVQ6 151 aa14.15□□□□□ -0.14
RARA-201ENST00000254066 KRTAP1-3Q8IUG1 177 aa14.15□□□□□ -0.14
RARA-201ENST00000254066 ITPR3Q14573 2671 aa14.15□□□□□ -0.14
RARA-201ENST00000254066 SVEP1Q4LDE5 3571 aa14.14□□□□□ -0.15
RARA-201ENST00000254066 C9orf66Q5T8R8 295 aa14.14□□□□□ -0.15
RARA-201ENST00000254066 RMI2Q96E14 147 aa14.14□□□□□ -0.15
RARA-201ENST00000254066 KRTAP21-3Q3LHN1 58 aa14.14□□□□□ -0.15
RARA-201ENST00000254066 ZNF702PQ9H963 129 aa14.14□□□□□ -0.15
RARA-201ENST00000254066 TRAV10A0A0B4J240 114 aa14.13□□□□□ -0.15
RARA-201ENST00000254066 TRBV7-6A0A0J9YX20 115 aa14.13□□□□□ -0.15
RARA-201ENST00000254066 IGHV4-30-2A0A087WSY4 118 aa14.12□□□□□ -0.15
RARA-201ENST00000254066 HAMPP81172 84 aa14.12□□□□□ -0.15
RARA-201ENST00000254066 SNURFQ9Y675 71 aa14.12□□□□□ -0.15
RARA-201ENST00000254066 ERC2-IT1O76042 136 aa14.11□□□□□ -0.15
RARA-201ENST00000254066 ODF3L2Q3SX64 289 aa14.1□□□□□ -0.15
RARA-201ENST00000254066 MRPL55Q7Z7F7 128 aaKnown RBP14.1□□□□□ -0.15
RARA-201ENST00000254066 NOP10Q9NPE3 64 aaKnown RBP14.1□□□□□ -0.15
RARA-201ENST00000254066 TRBV7-4A0A0J9YYF1 115 aa14.1□□□□□ -0.15
RARA-201ENST00000254066 DEFB136Q30KP8 78 aa14.1□□□□□ -0.15
RARA-201ENST00000254066 C6orf99Q4VX62 202 aa14.1□□□□□ -0.15
RARA-201ENST00000254066 PLAC8L1A1L4L8 177 aa14.09□□□□□ -0.15
RARA-201ENST00000254066 C16orf74Q96GX8 76 aa14.09□□□□□ -0.15
RARA-201ENST00000254066 C2CD3Q4AC94 2353 aa14.09□□□□□ -0.15
RARA-201ENST00000254066 ZFHX3Q15911 3703 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms