RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tcf20Q9EPQ8 1987 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Zfp362B1ASA5 418 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Tex54G3UW99 86 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 D730048I06RikQ9CQB8 106 aa13.88□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 GaptQ8CB93 157 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Nkx2-8O70584 235 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 SellP18337 372 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 P18533 117 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Pcp4P63054 62 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 1700031F05RikB1AX30 191 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Ss18l1Q8BW22 402 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Fgf16Q9ESL8 207 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 AcacbE9Q4Z2 2448 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm42517A0A1Y7VLQ2 374 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm21974F6W3F3 119 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 TtrP07309 147 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Cysltr1Q99JA4 352 aa13.87□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 A0A1Y7VMQ4 148 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Trdv1A0A075B657 112 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Efnb3O35393 340 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 P01657 111 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gtsf1lQ9CWD0 151 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Tmem42Q9CR22 157 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Spink6Q8BT20 105 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Hs3st3b1Q9QZS6 390 aa13.86□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Psg25Q497W1 475 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Samd13D3YUG0 102 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Anapc10Q8K2H6 185 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Isg15Q64339 161 aaKnown RBP13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm7489Q3UT34 171 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 AgaQ64191 346 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 1700067P10RikG3X8U2 183 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Il19Q8CJ70 176 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Scrt1Q99M85 348 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Rif1Q6PR54 2419 aaKnown RBP13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Ighv7-3A0A075B5R2 120 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm35549A0A0N4SUS7 141 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm94Q3V2D2 93 aa13.85□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm13030A2APQ6 143 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Adra2aQ01338 450 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Hist3h2bbQ8CGP0 126 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Hist3h2baQ9D2U9 126 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm26938S4R185 226 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 2200002J24RikQ9D807 110 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 MNCb-2875Q9DCB3 74 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Klk1b27Q9JM71 263 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Higd1aQ9JLR9 95 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 1110002E22RikE0CYV9 1786 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm21976J3QNN2 249 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Klf14Q19A41 325 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Igkv9-124A0A0G2JDR3 117 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 5730522E02RikQ5SP45 163 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Dynlt3P56387 116 aa13.84□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gm21616B6ZB74 166 aa13.83□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Csf2rb2P26954 878 aa13.83□□□□□ -0.19
Ccdc88a-201ENSMUST00000040182 Gng7Q61016 68 aa13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Cxcl14Q9WUQ5 99 aa13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Grem1O70326 184 aa13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ly6aP05533 134 aa13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 C1ql2Q8CFR0 287 aa13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ssbp1Q9CYR0 152 aaKnown RBP13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Dmrtc2Q8CGW9 370 aa13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 DscamQ9ERC8 2013 aa13.83□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Iglc3P01845 104 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Pglyrp4Q0VB07 374 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Trav6d-4Q5R1I0 115 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 PinlypQ9CQD7 212 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 MdfiP70331 251 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ifi27l2aQ8R412 90 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ighv1-22A0A075B5U7 117 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 LtbP41155 306 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Fam53bQ8BGR5 422 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Q9D727 114 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 DnlzQ9D113 177 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Hils1Q9QYL0 170 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Trav13n-4A0A0G2JG01 110 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Igkv15-103A0A140T8P3 115 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Hbb-bsA8DUK4 147 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Hbb-b1P02088 147 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Olfr317Q5NCD6 327 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Lime1Q9EQR5 269 aa13.82□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Col9a3A2ACT7 680 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ighv1-20A0A0A6YX66 117 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ly6lH3BJG9 140 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Il3raP26952 396 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Efna2P52801 209 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Tmem167aQ9CR64 72 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Igkv6-25A0A140T8N7 115 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ssbp2Q9CYZ8 361 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Igkv6-32A0A140T8N9 115 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm10447Q3UQ92 135 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 OtorQ9JIE3 128 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm10521E9PZK0 135 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm10645Q3UPY1 145 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Spsb3Q571F5 354 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Tcrg-C1A0A075B5Z0 172 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Tcrg-C3L7N479 172 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Mrpl55Q9CZ83 127 aa13.81□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Pcnx3Q8VI59 2028 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Vwc2lQ505H4 222 aa13.8□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms